Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CNOT4O95628 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CNOT4O95628 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.44□□□□□ -1.54
CNOT4O95628 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.44□□□□□ -1.54
CNOT4O95628 AL079343.1-201ENST00000572358 1771 ntBASIC5.44□□□□□ -1.54
CNOT4O95628 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.44□□□□□ -1.54
CNOT4O95628 AL133243.2-201ENST00000610331 1621 ntBASIC5.44□□□□□ -1.54
CNOT4O95628 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CNOT4O95628 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CNOT4O95628 TEX21P-201ENST00000447107 1476 ntBASIC5.44□□□□□ -1.54
CNOT4O95628 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
CNOT4O95628 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CNOT4O95628 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
CNOT4O95628 MAPK6PS3-201ENST00000403865 2162 ntBASIC5.43□□□□□ -1.54
CNOT4O95628 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CNOT4O95628 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CNOT4O95628 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CNOT4O95628 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CNOT4O95628 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
CNOT4O95628 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.43□□□□□ -1.54
CNOT4O95628 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC5.43□□□□□ -1.54
CNOT4O95628 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CNOT4O95628 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CNOT4O95628 MTND5P26-201ENST00000426018 1752 ntBASIC5.43□□□□□ -1.54
CNOT4O95628 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
CNOT4O95628 Y_RNA.554-201ENST00000384672 102 ntBASIC5.43□□□□□ -1.54
CNOT4O95628 MIR181A1-201ENST00000385026 110 ntBASIC5.43□□□□□ -1.54
CNOT4O95628 RNA5SP251-201ENST00000410614 137 ntBASIC5.43□□□□□ -1.54
CNOT4O95628 PIGPP2-201ENST00000411569 458 ntBASIC5.43□□□□□ -1.54
CNOT4O95628 HMGA1P8-201ENST00000414130 321 ntBASIC5.43□□□□□ -1.54
CNOT4O95628 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.43□□□□□ -1.54
CNOT4O95628 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.43□□□□□ -1.54
CNOT4O95628 UBTFL3-201ENST00000418934 1024 ntBASIC5.43□□□□□ -1.54
CNOT4O95628 RPS17P17-201ENST00000419392 409 ntBASIC5.43□□□□□ -1.54
CNOT4O95628 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.43□□□□□ -1.54
CNOT4O95628 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.43□□□□□ -1.54
CNOT4O95628 CHEK2P5-201ENST00000423877 246 ntBASIC5.43□□□□□ -1.54
CNOT4O95628 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.43□□□□□ -1.54
CNOT4O95628 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.43□□□□□ -1.54
CNOT4O95628 RPL12P12-201ENST00000424633 501 ntBASIC5.43□□□□□ -1.54
CNOT4O95628 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CNOT4O95628 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.43□□□□□ -1.54
CNOT4O95628 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.43□□□□□ -1.54
CNOT4O95628 CDY14P-201ENST00000431260 1014 ntBASIC5.43□□□□□ -1.54
CNOT4O95628 RPS25P9-201ENST00000435591 252 ntBASIC5.43□□□□□ -1.54
CNOT4O95628 HMGB1P45-201ENST00000435986 653 ntBASIC5.43□□□□□ -1.54
CNOT4O95628 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.43□□□□□ -1.54
CNOT4O95628 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.43□□□□□ -1.54
CNOT4O95628 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC5.43□□□□□ -1.54
CNOT4O95628 AC073109.1-201ENST00000445066 978 ntBASIC5.43□□□□□ -1.54
CNOT4O95628 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC5.43□□□□□ -1.54
CNOT4O95628 AC114755.5-201ENST00000447760 831 ntBASIC5.43□□□□□ -1.54
CNOT4O95628 EPS15P1-201ENST00000448836 336 ntBASIC5.43□□□□□ -1.54
CNOT4O95628 PAXBP1P1-201ENST00000449315 447 ntBASIC5.43□□□□□ -1.54
CNOT4O95628 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.43□□□□□ -1.54
CNOT4O95628 CDY23P-201ENST00000451661 1014 ntBASIC5.43□□□□□ -1.54
CNOT4O95628 RPL23AP35-201ENST00000451906 501 ntBASIC5.43□□□□□ -1.54
CNOT4O95628 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CNOT4O95628 AL121769.1-201ENST00000469473 401 ntBASIC5.43□□□□□ -1.54
CNOT4O95628 UBTFL6-201ENST00000477929 1024 ntBASIC5.43□□□□□ -1.54
CNOT4O95628 PPIAP19-201ENST00000486414 492 ntBASIC5.43□□□□□ -1.54
CNOT4O95628 ACTG1P13-201ENST00000486987 1043 ntBASIC5.43□□□□□ -1.54
CNOT4O95628 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.43□□□□□ -1.54
CNOT4O95628 AC025458.1-201ENST00000506046 166 ntBASIC5.43□□□□□ -1.54
CNOT4O95628 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC5.43□□□□□ -1.54
CNOT4O95628 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC5.43□□□□□ -1.54
CNOT4O95628 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.43□□□□□ -1.54
CNOT4O95628 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.43□□□□□ -1.54
CNOT4O95628 CA1-215ENST00000522389 551 ntTSL 3 BASIC5.43□□□□□ -1.54
CNOT4O95628 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CNOT4O95628 AP003396.4-201ENST00000527574 265 ntBASIC5.43□□□□□ -1.54
CNOT4O95628 OR4C2P-201ENST00000530855 1064 ntBASIC5.43□□□□□ -1.54
CNOT4O95628 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC5.43□□□□□ -1.54
CNOT4O95628 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.43□□□□□ -1.54
CNOT4O95628 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CNOT4O95628 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.43□□□□□ -1.54
CNOT4O95628 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC5.43□□□□□ -1.54
CNOT4O95628 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.43□□□□□ -1.54
CNOT4O95628 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC5.43□□□□□ -1.54
CNOT4O95628 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.43□□□□□ -1.54
CNOT4O95628 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.43□□□□□ -1.54
CNOT4O95628 EIF5A2P1-201ENST00000564027 460 ntBASIC5.43□□□□□ -1.54
CNOT4O95628 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.43□□□□□ -1.54
CNOT4O95628 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.43□□□□□ -1.54
CNOT4O95628 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC5.43□□□□□ -1.54
CNOT4O95628 AC027229.1-201ENST00000583887 253 ntBASIC5.43□□□□□ -1.54
CNOT4O95628 AC115085.1-201ENST00000588924 229 ntBASIC5.43□□□□□ -1.54
CNOT4O95628 VN1R92P-201ENST00000598511 928 ntBASIC5.43□□□□□ -1.54
CNOT4O95628 BNIP3P4-201ENST00000604946 565 ntBASIC5.43□□□□□ -1.54
CNOT4O95628 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.43□□□□□ -1.54
CNOT4O95628 RNU4-89P-201ENST00000607443 133 ntBASIC5.43□□□□□ -1.54
CNOT4O95628 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC5.43□□□□□ -1.54
CNOT4O95628 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CNOT4O95628 CR392039.4-201ENST00000624968 501 ntBASIC5.43□□□□□ -1.54
CNOT4O95628 AL157786.1-207ENST00000627771 695 ntBASIC5.43□□□□□ -1.54
CNOT4O95628 MIR193BHG-214ENST00000641765 509 ntBASIC5.43□□□□□ -1.54
CNOT4O95628 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CNOT4O95628 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CNOT4O95628 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CNOT4O95628 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms