Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC6.46□□□□□ -1.38
SOX1O00570 COX6CP17-201ENST00000421389 185 ntBASIC6.46□□□□□ -1.38
SOX1O00570 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC6.46□□□□□ -1.38
SOX1O00570 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC6.46□□□□□ -1.38
SOX1O00570 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.46□□□□□ -1.38
SOX1O00570 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC6.46□□□□□ -1.38
SOX1O00570 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.46□□□□□ -1.38
SOX1O00570 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC6.46□□□□□ -1.38
SOX1O00570 OR52B5P-201ENST00000435337 951 ntBASIC6.46□□□□□ -1.38
SOX1O00570 NDUFA5P4-201ENST00000436704 385 ntBASIC6.46□□□□□ -1.38
SOX1O00570 PGBD4P3-201ENST00000440731 581 ntBASIC6.46□□□□□ -1.38
SOX1O00570 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC6.46□□□□□ -1.38
SOX1O00570 RPL18AP17-201ENST00000455326 198 ntBASIC6.46□□□□□ -1.38
SOX1O00570 RN7SL385P-201ENST00000468873 276 ntBASIC6.46□□□□□ -1.38
SOX1O00570 AC087312.1-201ENST00000471411 480 ntBASIC6.46□□□□□ -1.38
SOX1O00570 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
SOX1O00570 RN7SL583P-201ENST00000475692 287 ntBASIC6.46□□□□□ -1.38
SOX1O00570 AC083982.1-201ENST00000485679 344 ntBASIC6.46□□□□□ -1.38
SOX1O00570 KCTD9P5-201ENST00000504141 1170 ntBASIC6.46□□□□□ -1.38
SOX1O00570 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC6.46□□□□□ -1.38
SOX1O00570 AC010493.1-201ENST00000513479 292 ntBASIC6.46□□□□□ -1.38
SOX1O00570 Y_RNA.704-201ENST00000516851 102 ntBASIC6.46□□□□□ -1.38
SOX1O00570 TBCA-203ENST00000517679 545 ntTSL 3 BASIC6.46□□□□□ -1.38
SOX1O00570 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.46□□□□□ -1.38
SOX1O00570 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC6.46□□□□□ -1.38
SOX1O00570 SLC2A13P1-201ENST00000531560 322 ntBASIC6.46□□□□□ -1.38
SOX1O00570 HMGB1P42-201ENST00000532126 553 ntBASIC6.46□□□□□ -1.38
SOX1O00570 AL512310.1-201ENST00000548639 172 ntBASIC6.46□□□□□ -1.38
SOX1O00570 ARL2BPP2-201ENST00000550907 489 ntBASIC6.46□□□□□ -1.38
SOX1O00570 IGBP1P1-201ENST00000554337 1009 ntBASIC6.46□□□□□ -1.38
SOX1O00570 AL390334.1-201ENST00000556395 450 ntBASIC6.46□□□□□ -1.38
SOX1O00570 AL359212.1-201ENST00000556608 614 ntBASIC6.46□□□□□ -1.38
SOX1O00570 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.46□□□□□ -1.38
SOX1O00570 AC025678.1-201ENST00000567861 338 ntBASIC6.46□□□□□ -1.38
SOX1O00570 RPS3AP23-202ENST00000574601 686 ntBASIC6.46□□□□□ -1.38
SOX1O00570 SNORA70D-201ENST00000578836 135 ntBASIC6.46□□□□□ -1.38
SOX1O00570 MIR1254-2-201ENST00000579553 63 ntBASIC6.46□□□□□ -1.38
SOX1O00570 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC6.46□□□□□ -1.38
SOX1O00570 AC011840.5-201ENST00000582125 771 ntBASIC6.46□□□□□ -1.38
SOX1O00570 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC6.46□□□□□ -1.38
SOX1O00570 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.46□□□□□ -1.38
SOX1O00570 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC6.46□□□□□ -1.38
SOX1O00570 NRBF2P5-201ENST00000603087 788 ntBASIC6.46□□□□□ -1.38
SOX1O00570 AC112191.3-201ENST00000604371 277 ntBASIC6.46□□□□□ -1.38
SOX1O00570 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SOX1O00570 AC090574.1-201ENST00000623186 233 ntBASIC6.46□□□□□ -1.38
SOX1O00570 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC6.46□□□□□ -1.38
SOX1O00570 MIR3662-201ENST00000637030 95 ntBASIC6.46□□□□□ -1.38
SOX1O00570 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC6.46□□□□□ -1.38
SOX1O00570 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
SOX1O00570 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
SOX1O00570 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SOX1O00570 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SOX1O00570 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SOX1O00570 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC6.46□□□□□ -1.38
SOX1O00570 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
SOX1O00570 MAPK10-365ENST00000641902 3825 ntBASIC6.46□□□□□ -1.38
SOX1O00570 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SOX1O00570 DYNC1I2P1-201ENST00000435916 1838 ntBASIC6.46□□□□□ -1.38
SOX1O00570 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SOX1O00570 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SOX1O00570 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
SOX1O00570 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.45□□□□□ -1.38
SOX1O00570 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.45□□□□□ -1.38
SOX1O00570 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.45□□□□□ -1.38
SOX1O00570 AL662795.2-201ENST00000624252 3706 ntBASIC6.45□□□□□ -1.38
SOX1O00570 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
SOX1O00570 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
SOX1O00570 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
SOX1O00570 AC016583.1-201ENST00000624221 2431 ntBASIC6.45□□□□□ -1.38
SOX1O00570 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SOX1O00570 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SOX1O00570 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
SOX1O00570 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
SOX1O00570 RNU4-7P-201ENST00000364758 141 ntBASIC6.45□□□□□ -1.38
SOX1O00570 RNU6-1227P-201ENST00000383981 107 ntBASIC6.45□□□□□ -1.38
SOX1O00570 AC007390.1-201ENST00000415722 356 ntBASIC6.45□□□□□ -1.38
SOX1O00570 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC6.45□□□□□ -1.38
SOX1O00570 AL354868.1-201ENST00000417077 482 ntBASIC6.45□□□□□ -1.38
SOX1O00570 TMBIM7P-201ENST00000418074 855 ntBASIC6.45□□□□□ -1.38
SOX1O00570 AC083875.1-201ENST00000419509 405 ntBASIC6.45□□□□□ -1.38
SOX1O00570 RPS15AP30-201ENST00000420976 390 ntBASIC6.45□□□□□ -1.38
SOX1O00570 BX890604.2-201ENST00000427883 474 ntBASIC6.45□□□□□ -1.38
SOX1O00570 HSPD1P12-201ENST00000429127 1069 ntBASIC6.45□□□□□ -1.38
SOX1O00570 CYCSP12-201ENST00000437729 300 ntBASIC6.45□□□□□ -1.38
SOX1O00570 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SOX1O00570 GAPDHP23-201ENST00000444823 993 ntBASIC6.45□□□□□ -1.38
SOX1O00570 DEFA11P-201ENST00000446470 261 ntBASIC6.45□□□□□ -1.38
SOX1O00570 AL161722.1-201ENST00000446972 1032 ntBASIC6.45□□□□□ -1.38
SOX1O00570 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.45□□□□□ -1.38
SOX1O00570 GAPDHP17-201ENST00000449858 1001 ntBASIC6.45□□□□□ -1.38
SOX1O00570 AL935212.3-201ENST00000450729 284 ntBASIC6.45□□□□□ -1.38
SOX1O00570 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC6.45□□□□□ -1.38
SOX1O00570 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC6.45□□□□□ -1.38
SOX1O00570 AC021205.1-201ENST00000468797 348 ntBASIC6.45□□□□□ -1.38
SOX1O00570 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SOX1O00570 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC6.45□□□□□ -1.38
SOX1O00570 HMGN1P13-201ENST00000505795 138 ntBASIC6.45□□□□□ -1.38
SOX1O00570 AC010343.2-201ENST00000510162 224 ntBASIC6.45□□□□□ -1.38
SOX1O00570 AC108064.1-201ENST00000513791 460 ntBASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms