Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 DNAJB5P1-201ENST00000454004 806 ntBASIC6.05□□□□□ -1.44
CTDP1Q9Y5B0 USP9YP10-201ENST00000454868 628 ntBASIC6.05□□□□□ -1.44
CTDP1Q9Y5B0 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC6.05□□□□□ -1.44
CTDP1Q9Y5B0 AC023050.1-201ENST00000498198 304 ntBASIC6.05□□□□□ -1.44
CTDP1Q9Y5B0 AC093890.1-201ENST00000502554 540 ntBASIC6.05□□□□□ -1.44
CTDP1Q9Y5B0 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC6.05□□□□□ -1.44
CTDP1Q9Y5B0 USP9YP5-201ENST00000511770 630 ntBASIC6.05□□□□□ -1.44
CTDP1Q9Y5B0 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.05□□□□□ -1.44
CTDP1Q9Y5B0 AC138938.1-201ENST00000515431 782 ntBASIC6.05□□□□□ -1.44
CTDP1Q9Y5B0 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
CTDP1Q9Y5B0 AC024909.2-201ENST00000553035 286 ntBASIC6.05□□□□□ -1.44
CTDP1Q9Y5B0 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC6.05□□□□□ -1.44
CTDP1Q9Y5B0 MIR3934-201ENST00000579806 107 ntBASIC6.05□□□□□ -1.44
CTDP1Q9Y5B0 AC011840.5-201ENST00000582125 771 ntBASIC6.05□□□□□ -1.44
CTDP1Q9Y5B0 AC016877.3-201ENST00000606778 504 ntBASIC6.05□□□□□ -1.44
CTDP1Q9Y5B0 AC093799.2-201ENST00000610062 578 ntBASIC6.05□□□□□ -1.44
CTDP1Q9Y5B0 AC015712.7-201ENST00000615211 635 ntBASIC6.05□□□□□ -1.44
CTDP1Q9Y5B0 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC6.05□□□□□ -1.44
CTDP1Q9Y5B0 AC007490.1-201ENST00000624321 703 ntBASIC6.05□□□□□ -1.44
CTDP1Q9Y5B0 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CTDP1Q9Y5B0 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
CTDP1Q9Y5B0 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
CTDP1Q9Y5B0 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
CTDP1Q9Y5B0 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
CTDP1Q9Y5B0 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC6.05□□□□□ -1.44
CTDP1Q9Y5B0 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC6.05□□□□□ -1.44
CTDP1Q9Y5B0 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CTDP1Q9Y5B0 EEF1A1P36-201ENST00000427807 1351 ntBASIC6.05□□□□□ -1.44
CTDP1Q9Y5B0 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC6.05□□□□□ -1.44
CTDP1Q9Y5B0 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CTDP1Q9Y5B0 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CTDP1Q9Y5B0 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CTDP1Q9Y5B0 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC6.04□□□□□ -1.44
CTDP1Q9Y5B0 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CTDP1Q9Y5B0 TANK-205ENST00000405852 2155 ntTSL 5 BASIC6.04□□□□□ -1.44
CTDP1Q9Y5B0 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
CTDP1Q9Y5B0 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CTDP1Q9Y5B0 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC6.04□□□□□ -1.44
CTDP1Q9Y5B0 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.04□□□□□ -1.44
CTDP1Q9Y5B0 SMG1P6-201ENST00000532337 2930 ntBASIC6.04□□□□□ -1.44
CTDP1Q9Y5B0 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CTDP1Q9Y5B0 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CTDP1Q9Y5B0 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CTDP1Q9Y5B0 SPATA2P1-201ENST00000431223 2055 ntBASIC6.04□□□□□ -1.44
CTDP1Q9Y5B0 AC103591.2-201ENST00000265259 766 ntBASIC6.04□□□□□ -1.44
CTDP1Q9Y5B0 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CTDP1Q9Y5B0 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CTDP1Q9Y5B0 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CTDP1Q9Y5B0 U3.3-201ENST00000362986 216 ntBASIC6.04□□□□□ -1.44
CTDP1Q9Y5B0 RNA5SP90-201ENST00000364801 99 ntBASIC6.04□□□□□ -1.44
CTDP1Q9Y5B0 RN7SKP153-201ENST00000365026 316 ntBASIC6.04□□□□□ -1.44
CTDP1Q9Y5B0 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CTDP1Q9Y5B0 SNORA68.2-201ENST00000391263 128 ntBASIC6.04□□□□□ -1.44
CTDP1Q9Y5B0 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC6.04□□□□□ -1.44
CTDP1Q9Y5B0 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC6.04□□□□□ -1.44
CTDP1Q9Y5B0 MTND4P20-201ENST00000424125 869 ntBASIC6.04□□□□□ -1.44
CTDP1Q9Y5B0 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC6.04□□□□□ -1.44
CTDP1Q9Y5B0 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC6.04□□□□□ -1.44
CTDP1Q9Y5B0 PSMD10P3-201ENST00000437000 448 ntBASIC6.04□□□□□ -1.44
CTDP1Q9Y5B0 CASP3P1-201ENST00000446037 609 ntBASIC6.04□□□□□ -1.44
CTDP1Q9Y5B0 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC6.04□□□□□ -1.44
CTDP1Q9Y5B0 GAPDHP14-201ENST00000450472 937 ntBASIC6.04□□□□□ -1.44
CTDP1Q9Y5B0 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC6.04□□□□□ -1.44
CTDP1Q9Y5B0 AC092754.2-201ENST00000463506 460 ntBASIC6.04□□□□□ -1.44
CTDP1Q9Y5B0 AC097484.1-201ENST00000471148 389 ntBASIC6.04□□□□□ -1.44
CTDP1Q9Y5B0 BX284632.1-201ENST00000478218 541 ntBASIC6.04□□□□□ -1.44
CTDP1Q9Y5B0 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC6.04□□□□□ -1.44
CTDP1Q9Y5B0 MTCYBP37-201ENST00000510642 1133 ntBASIC6.04□□□□□ -1.44
CTDP1Q9Y5B0 HMGN1P9-201ENST00000515212 298 ntBASIC6.04□□□□□ -1.44
CTDP1Q9Y5B0 OR8Q1P-201ENST00000526467 655 ntBASIC6.04□□□□□ -1.44
CTDP1Q9Y5B0 PCNPP1-201ENST00000552501 511 ntBASIC6.04□□□□□ -1.44
CTDP1Q9Y5B0 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC6.04□□□□□ -1.44
CTDP1Q9Y5B0 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CTDP1Q9Y5B0 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC6.04□□□□□ -1.44
CTDP1Q9Y5B0 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC6.04□□□□□ -1.44
CTDP1Q9Y5B0 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.04□□□□□ -1.44
CTDP1Q9Y5B0 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC6.04□□□□□ -1.44
CTDP1Q9Y5B0 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC6.04□□□□□ -1.44
CTDP1Q9Y5B0 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC6.04□□□□□ -1.44
CTDP1Q9Y5B0 AC068790.6-201ENST00000602558 258 ntBASIC6.04□□□□□ -1.44
CTDP1Q9Y5B0 AC096553.1-201ENST00000605169 829 ntBASIC6.04□□□□□ -1.44
CTDP1Q9Y5B0 AC135507.1-201ENST00000607214 561 ntBASIC6.04□□□□□ -1.44
CTDP1Q9Y5B0 AC091905.4-201ENST00000623432 202 ntBASIC6.04□□□□□ -1.44
CTDP1Q9Y5B0 AC138965.3-201ENST00000623875 498 ntBASIC6.04□□□□□ -1.44
CTDP1Q9Y5B0 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CTDP1Q9Y5B0 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
CTDP1Q9Y5B0 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CTDP1Q9Y5B0 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
CTDP1Q9Y5B0 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.04□□□□□ -1.44
CTDP1Q9Y5B0 PANDAR-201ENST00000629595 1506 ntBASIC6.04□□□□□ -1.44
CTDP1Q9Y5B0 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CTDP1Q9Y5B0 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC6.03□□□□□ -1.44
CTDP1Q9Y5B0 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CTDP1Q9Y5B0 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC6.03□□□□□ -1.44
CTDP1Q9Y5B0 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CTDP1Q9Y5B0 AC004817.4-201ENST00000602396 3625 ntBASIC6.03□□□□□ -1.44
CTDP1Q9Y5B0 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
CTDP1Q9Y5B0 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC6.03□□□□□ -1.44
CTDP1Q9Y5B0 SNURFL-201ENST00000309296 343 ntBASIC6.03□□□□□ -1.44
CTDP1Q9Y5B0 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms