Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 AC016769.4-201ENST00000616893 535 ntBASIC4.98□□□□□ -1.61
PKP3Q9Y446 AC109454.4-201ENST00000623411 649 ntBASIC4.98□□□□□ -1.61
PKP3Q9Y446 OR1S1-201ENST00000624470 978 ntBASIC4.98□□□□□ -1.61
PKP3Q9Y446 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.98□□□□□ -1.61
PKP3Q9Y446 MTND2P41-201ENST00000637599 773 ntBASIC4.98□□□□□ -1.61
PKP3Q9Y446 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.98□□□□□ -1.61
PKP3Q9Y446 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PKP3Q9Y446 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.98□□□□□ -1.61
PKP3Q9Y446 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.98□□□□□ -1.61
PKP3Q9Y446 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PKP3Q9Y446 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
PKP3Q9Y446 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
PKP3Q9Y446 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.98□□□□□ -1.61
PKP3Q9Y446 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.97□□□□□ -1.61
PKP3Q9Y446 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
PKP3Q9Y446 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PKP3Q9Y446 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.97□□□□□ -1.61
PKP3Q9Y446 IGKV7-3-201ENST00000357453 298 ntBASIC4.97□□□□□ -1.61
PKP3Q9Y446 RNA5SP428-201ENST00000365129 132 ntBASIC4.97□□□□□ -1.61
PKP3Q9Y446 HMGB1P49-201ENST00000418882 569 ntBASIC4.97□□□□□ -1.61
PKP3Q9Y446 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.97□□□□□ -1.61
PKP3Q9Y446 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.97□□□□□ -1.61
PKP3Q9Y446 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.97□□□□□ -1.61
PKP3Q9Y446 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.97□□□□□ -1.61
PKP3Q9Y446 HIGD1AP12-201ENST00000427832 281 ntBASIC4.97□□□□□ -1.61
PKP3Q9Y446 CDY14P-201ENST00000431260 1014 ntBASIC4.97□□□□□ -1.61
PKP3Q9Y446 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.97□□□□□ -1.61
PKP3Q9Y446 CDY12P-201ENST00000440679 1015 ntBASIC4.97□□□□□ -1.61
PKP3Q9Y446 CDY13P-201ENST00000445813 1015 ntBASIC4.97□□□□□ -1.61
PKP3Q9Y446 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.97□□□□□ -1.61
PKP3Q9Y446 AL035551.1-201ENST00000446931 348 ntBASIC4.97□□□□□ -1.61
PKP3Q9Y446 MTCYBP11-201ENST00000447254 1109 ntBASIC4.97□□□□□ -1.61
PKP3Q9Y446 AC005002.1-201ENST00000447458 540 ntBASIC4.97□□□□□ -1.61
PKP3Q9Y446 AC004022.1-201ENST00000447766 1066 ntBASIC4.97□□□□□ -1.61
PKP3Q9Y446 CDY23P-201ENST00000451661 1014 ntBASIC4.97□□□□□ -1.61
PKP3Q9Y446 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.97□□□□□ -1.61
PKP3Q9Y446 AC005410.1-202ENST00000460347 485 ntBASIC4.97□□□□□ -1.61
PKP3Q9Y446 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.97□□□□□ -1.61
PKP3Q9Y446 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC4.97□□□□□ -1.61
PKP3Q9Y446 AC140172.1-201ENST00000502928 141 ntBASIC4.97□□□□□ -1.61
PKP3Q9Y446 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.97□□□□□ -1.61
PKP3Q9Y446 AC093534.1-201ENST00000504977 132 ntBASIC4.97□□□□□ -1.61
PKP3Q9Y446 HPRT1P2-201ENST00000505250 544 ntBASIC4.97□□□□□ -1.61
PKP3Q9Y446 AC008638.1-201ENST00000506035 866 ntBASIC4.97□□□□□ -1.61
PKP3Q9Y446 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.97□□□□□ -1.61
PKP3Q9Y446 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.97□□□□□ -1.61
PKP3Q9Y446 AC018442.3-201ENST00000523025 183 ntBASIC4.97□□□□□ -1.61
PKP3Q9Y446 EIF4A2P5-201ENST00000529914 499 ntBASIC4.97□□□□□ -1.61
PKP3Q9Y446 VBP1-203ENST00000535916 944 ntTSL 2 BASIC4.97□□□□□ -1.61
PKP3Q9Y446 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.97□□□□□ -1.61
PKP3Q9Y446 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PKP3Q9Y446 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC4.97□□□□□ -1.61
PKP3Q9Y446 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.97□□□□□ -1.61
PKP3Q9Y446 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC4.97□□□□□ -1.61
PKP3Q9Y446 NPM1P47-201ENST00000560843 856 ntBASIC4.97□□□□□ -1.61
PKP3Q9Y446 MTCO1P40-201ENST00000574371 625 ntBASIC4.97□□□□□ -1.61
PKP3Q9Y446 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.97□□□□□ -1.61
PKP3Q9Y446 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.97□□□□□ -1.61
PKP3Q9Y446 AC009237.15-201ENST00000610252 501 ntBASIC4.97□□□□□ -1.61
PKP3Q9Y446 AC231759.1-201ENST00000616455 597 ntBASIC4.97□□□□□ -1.61
PKP3Q9Y446 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.97□□□□□ -1.61
PKP3Q9Y446 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PKP3Q9Y446 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
PKP3Q9Y446 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.97□□□□□ -1.61
PKP3Q9Y446 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.97□□□□□ -1.61
PKP3Q9Y446 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PKP3Q9Y446 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
PKP3Q9Y446 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PKP3Q9Y446 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.97□□□□□ -1.61
PKP3Q9Y446 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
PKP3Q9Y446 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.96□□□□□ -1.61
PKP3Q9Y446 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.61
PKP3Q9Y446 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
PKP3Q9Y446 NSRP1P1-201ENST00000444067 1693 ntBASIC4.96□□□□□ -1.61
PKP3Q9Y446 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
PKP3Q9Y446 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
PKP3Q9Y446 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
PKP3Q9Y446 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
PKP3Q9Y446 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
PKP3Q9Y446 RNU6-1339P-201ENST00000363574 91 ntBASIC4.96□□□□□ -1.62
PKP3Q9Y446 RNU1-87P-201ENST00000363727 170 ntBASIC4.96□□□□□ -1.62
PKP3Q9Y446 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC4.96□□□□□ -1.62
PKP3Q9Y446 RNU6-225P-201ENST00000384613 103 ntBASIC4.96□□□□□ -1.62
PKP3Q9Y446 MIR105-2-201ENST00000385083 81 ntBASIC4.96□□□□□ -1.62
PKP3Q9Y446 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PKP3Q9Y446 MTCO2P31-201ENST00000402702 684 ntBASIC4.96□□□□□ -1.62
PKP3Q9Y446 DPPA2P3-201ENST00000411853 655 ntBASIC4.96□□□□□ -1.62
PKP3Q9Y446 NPM1P40-201ENST00000412758 733 ntBASIC4.96□□□□□ -1.62
PKP3Q9Y446 AF186996.5-201ENST00000418098 904 ntBASIC4.96□□□□□ -1.62
PKP3Q9Y446 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.96□□□□□ -1.62
PKP3Q9Y446 AC112492.1-201ENST00000449607 712 ntBASIC4.96□□□□□ -1.62
PKP3Q9Y446 OTX2P1-201ENST00000450956 354 ntBASIC4.96□□□□□ -1.62
PKP3Q9Y446 AC091959.2-201ENST00000477363 321 ntBASIC4.96□□□□□ -1.62
PKP3Q9Y446 RPL7AP6-201ENST00000477943 801 ntBASIC4.96□□□□□ -1.62
PKP3Q9Y446 RPL7AP10-201ENST00000481016 791 ntBASIC4.96□□□□□ -1.62
PKP3Q9Y446 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.96□□□□□ -1.62
PKP3Q9Y446 AC093890.1-201ENST00000502554 540 ntBASIC4.96□□□□□ -1.62
PKP3Q9Y446 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.96□□□□□ -1.62
PKP3Q9Y446 AC108471.1-201ENST00000513977 287 ntBASIC4.96□□□□□ -1.62
PKP3Q9Y446 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms