Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AC008083.2-201ENST00000546707 476 ntBASIC4.22□□□□□ -1.73
NPIPA1Q9UND3 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.22□□□□□ -1.73
NPIPA1Q9UND3 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.22□□□□□ -1.73
NPIPA1Q9UND3 AC136624.4-201ENST00000573044 370 ntBASIC4.22□□□□□ -1.73
NPIPA1Q9UND3 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.22□□□□□ -1.73
NPIPA1Q9UND3 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC4.22□□□□□ -1.73
NPIPA1Q9UND3 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC4.22□□□□□ -1.73
NPIPA1Q9UND3 PSMA6P4-201ENST00000603247 718 ntBASIC4.22□□□□□ -1.73
NPIPA1Q9UND3 AL049844.2-201ENST00000604280 628 ntBASIC4.22□□□□□ -1.73
NPIPA1Q9UND3 AL590392.1-201ENST00000604960 446 ntBASIC4.22□□□□□ -1.73
NPIPA1Q9UND3 COX6CP4-201ENST00000605798 228 ntBASIC4.22□□□□□ -1.73
NPIPA1Q9UND3 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NPIPA1Q9UND3 RAD17P1-201ENST00000418130 2042 ntBASIC4.22□□□□□ -1.73
NPIPA1Q9UND3 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
NPIPA1Q9UND3 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
NPIPA1Q9UND3 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
NPIPA1Q9UND3 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
NPIPA1Q9UND3 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.22□□□□□ -1.73
NPIPA1Q9UND3 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
NPIPA1Q9UND3 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NPIPA1Q9UND3 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
NPIPA1Q9UND3 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.22□□□□□ -1.73
NPIPA1Q9UND3 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.21□□□□□ -1.73
NPIPA1Q9UND3 MFSD8-220ENST00000641243 1422 ntBASIC4.21□□□□□ -1.73
NPIPA1Q9UND3 AC017002.4-201ENST00000604721 1525 ntBASIC4.21□□□□□ -1.73
NPIPA1Q9UND3 OR51H2P-202ENST00000641424 3046 ntBASIC4.21□□□□□ -1.74
NPIPA1Q9UND3 OR10J6P-201ENST00000289731 930 ntBASIC4.21□□□□□ -1.74
NPIPA1Q9UND3 AC011155.1-201ENST00000316512 456 ntBASIC4.21□□□□□ -1.74
NPIPA1Q9UND3 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
NPIPA1Q9UND3 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NPIPA1Q9UND3 MIR92A2-201ENST00000385299 75 ntBASIC4.21□□□□□ -1.74
NPIPA1Q9UND3 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.21□□□□□ -1.74
NPIPA1Q9UND3 ATP5F1P2-201ENST00000398143 760 ntBASIC4.21□□□□□ -1.74
NPIPA1Q9UND3 AL359643.1-201ENST00000404109 423 ntBASIC4.21□□□□□ -1.74
NPIPA1Q9UND3 EIF4A1P3-201ENST00000411521 244 ntBASIC4.21□□□□□ -1.74
NPIPA1Q9UND3 RPL7P57-201ENST00000423238 740 ntBASIC4.21□□□□□ -1.74
NPIPA1Q9UND3 RSL24D1P6-201ENST00000426934 401 ntBASIC4.21□□□□□ -1.74
NPIPA1Q9UND3 AL353597.2-202ENST00000434901 373 ntBASIC4.21□□□□□ -1.74
NPIPA1Q9UND3 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.21□□□□□ -1.74
NPIPA1Q9UND3 AL357520.1-201ENST00000441557 453 ntBASIC4.21□□□□□ -1.74
NPIPA1Q9UND3 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.21□□□□□ -1.74
NPIPA1Q9UND3 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.21□□□□□ -1.74
NPIPA1Q9UND3 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.21□□□□□ -1.74
NPIPA1Q9UND3 RNU6-1218P-201ENST00000458990 108 ntBASIC4.21□□□□□ -1.74
NPIPA1Q9UND3 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.21□□□□□ -1.74
NPIPA1Q9UND3 APOOP2-201ENST00000461561 539 ntBASIC4.21□□□□□ -1.74
NPIPA1Q9UND3 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NPIPA1Q9UND3 RPL36AP41-201ENST00000493820 306 ntBASIC4.21□□□□□ -1.74
NPIPA1Q9UND3 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.21□□□□□ -1.74
NPIPA1Q9UND3 MTCO1P31-201ENST00000506355 492 ntBASIC4.21□□□□□ -1.74
NPIPA1Q9UND3 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.21□□□□□ -1.74
NPIPA1Q9UND3 PDCD5P1-201ENST00000543528 309 ntBASIC4.21□□□□□ -1.74
NPIPA1Q9UND3 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.21□□□□□ -1.74
NPIPA1Q9UND3 AC023575.1-201ENST00000580510 358 ntBASIC4.21□□□□□ -1.74
NPIPA1Q9UND3 KPNA2P3-201ENST00000584190 848 ntBASIC4.21□□□□□ -1.74
NPIPA1Q9UND3 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.21□□□□□ -1.74
NPIPA1Q9UND3 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.21□□□□□ -1.74
NPIPA1Q9UND3 AC010200.2-201ENST00000605098 235 ntBASIC4.21□□□□□ -1.74
NPIPA1Q9UND3 KATNBL1P1-201ENST00000605192 748 ntBASIC4.21□□□□□ -1.74
NPIPA1Q9UND3 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NPIPA1Q9UND3 AC116447.1-201ENST00000613153 453 ntBASIC4.21□□□□□ -1.74
NPIPA1Q9UND3 AL035461.2-201ENST00000619201 524 ntBASIC4.21□□□□□ -1.74
NPIPA1Q9UND3 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.21□□□□□ -1.74
NPIPA1Q9UND3 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.21□□□□□ -1.74
NPIPA1Q9UND3 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NPIPA1Q9UND3 OR52H1-202ENST00000641796 1061 ntBASIC4.21□□□□□ -1.74
NPIPA1Q9UND3 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NPIPA1Q9UND3 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
NPIPA1Q9UND3 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NPIPA1Q9UND3 AL451142.2-201ENST00000429076 2090 ntBASIC4.21□□□□□ -1.74
NPIPA1Q9UND3 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NPIPA1Q9UND3 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.21□□□□□ -1.74
NPIPA1Q9UND3 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.21□□□□□ -1.74
NPIPA1Q9UND3 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
NPIPA1Q9UND3 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
NPIPA1Q9UND3 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
NPIPA1Q9UND3 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.21□□□□□ -1.74
NPIPA1Q9UND3 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
NPIPA1Q9UND3 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.21□□□□□ -1.74
NPIPA1Q9UND3 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
NPIPA1Q9UND3 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.2□□□□□ -1.74
NPIPA1Q9UND3 AC090017.1-201ENST00000548612 1779 ntBASIC4.2□□□□□ -1.74
NPIPA1Q9UND3 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NPIPA1Q9UND3 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
NPIPA1Q9UND3 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NPIPA1Q9UND3 RNA5SP498-201ENST00000411342 120 ntBASIC4.2□□□□□ -1.74
NPIPA1Q9UND3 RNU6-603P-201ENST00000411403 107 ntBASIC4.2□□□□□ -1.74
NPIPA1Q9UND3 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.2□□□□□ -1.74
NPIPA1Q9UND3 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.2□□□□□ -1.74
NPIPA1Q9UND3 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.2□□□□□ -1.74
NPIPA1Q9UND3 CBX1P1-201ENST00000440184 427 ntBASIC4.2□□□□□ -1.74
NPIPA1Q9UND3 TDGF1P1-201ENST00000445734 527 ntBASIC4.2□□□□□ -1.74
NPIPA1Q9UND3 AC108463.1-201ENST00000450258 347 ntBASIC4.2□□□□□ -1.74
NPIPA1Q9UND3 RPL7P48-201ENST00000461513 746 ntBASIC4.2□□□□□ -1.74
NPIPA1Q9UND3 AC011276.1-201ENST00000469688 323 ntBASIC4.2□□□□□ -1.74
NPIPA1Q9UND3 RPL21P126-201ENST00000470049 478 ntBASIC4.2□□□□□ -1.74
NPIPA1Q9UND3 AC005912.1-201ENST00000495392 255 ntBASIC4.2□□□□□ -1.74
NPIPA1Q9UND3 RPS4XP18-201ENST00000495480 763 ntBASIC4.2□□□□□ -1.74
NPIPA1Q9UND3 SUMO1P1-201ENST00000497904 306 ntBASIC4.2□□□□□ -1.74
NPIPA1Q9UND3 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms