Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
NPC1L1Q9UHC9 RNU1-13P-201ENST00000384499 162 ntBASIC5.63□□□□□ -1.51
NPC1L1Q9UHC9 RPS26P8-201ENST00000393490 348 ntBASIC5.63□□□□□ -1.51
NPC1L1Q9UHC9 AL445189.1-201ENST00000405722 338 ntBASIC5.63□□□□□ -1.51
NPC1L1Q9UHC9 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC5.63□□□□□ -1.51
NPC1L1Q9UHC9 RPL23AP38-201ENST00000423801 469 ntBASIC5.63□□□□□ -1.51
NPC1L1Q9UHC9 TRGV7-201ENST00000427089 353 ntBASIC5.63□□□□□ -1.51
NPC1L1Q9UHC9 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.63□□□□□ -1.51
NPC1L1Q9UHC9 AC034236.1-201ENST00000469891 373 ntBASIC5.63□□□□□ -1.51
NPC1L1Q9UHC9 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.63□□□□□ -1.51
NPC1L1Q9UHC9 IFITM8P-201ENST00000522529 394 ntBASIC5.63□□□□□ -1.51
NPC1L1Q9UHC9 GLRXP2-201ENST00000555594 321 ntBASIC5.63□□□□□ -1.51
NPC1L1Q9UHC9 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.63□□□□□ -1.51
NPC1L1Q9UHC9 CYP4A43P-201ENST00000568156 121 ntBASIC5.63□□□□□ -1.51
NPC1L1Q9UHC9 AC010547.7-201ENST00000570323 333 ntBASIC5.63□□□□□ -1.51
NPC1L1Q9UHC9 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.63□□□□□ -1.51
NPC1L1Q9UHC9 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.63□□□□□ -1.51
NPC1L1Q9UHC9 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC5.63□□□□□ -1.51
NPC1L1Q9UHC9 AC087468.1-201ENST00000604365 630 ntBASIC5.63□□□□□ -1.51
NPC1L1Q9UHC9 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NPC1L1Q9UHC9 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC5.63□□□□□ -1.51
NPC1L1Q9UHC9 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NPC1L1Q9UHC9 PROS2P-201ENST00000474651 1951 ntBASIC5.63□□□□□ -1.51
NPC1L1Q9UHC9 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NPC1L1Q9UHC9 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NPC1L1Q9UHC9 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
NPC1L1Q9UHC9 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
NPC1L1Q9UHC9 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NPC1L1Q9UHC9 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
NPC1L1Q9UHC9 RN7SKP280-201ENST00000364196 304 ntBASIC5.62□□□□□ -1.51
NPC1L1Q9UHC9 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
NPC1L1Q9UHC9 EIF4A1P3-201ENST00000411521 244 ntBASIC5.62□□□□□ -1.51
NPC1L1Q9UHC9 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.62□□□□□ -1.51
NPC1L1Q9UHC9 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.62□□□□□ -1.51
NPC1L1Q9UHC9 HLA-N-201ENST00000437516 135 ntBASIC5.62□□□□□ -1.51
NPC1L1Q9UHC9 ARAFP2-201ENST00000440565 559 ntBASIC5.62□□□□□ -1.51
NPC1L1Q9UHC9 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC5.62□□□□□ -1.51
NPC1L1Q9UHC9 RPL7P1-201ENST00000468161 747 ntBASIC5.62□□□□□ -1.51
NPC1L1Q9UHC9 RPL7P9-201ENST00000468715 747 ntBASIC5.62□□□□□ -1.51
NPC1L1Q9UHC9 RPL21P6-201ENST00000479171 504 ntBASIC5.62□□□□□ -1.51
NPC1L1Q9UHC9 AF213884.1-201ENST00000488102 463 ntBASIC5.62□□□□□ -1.51
NPC1L1Q9UHC9 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC5.62□□□□□ -1.51
NPC1L1Q9UHC9 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.62□□□□□ -1.51
NPC1L1Q9UHC9 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC5.62□□□□□ -1.51
NPC1L1Q9UHC9 DYNLL1P4-201ENST00000549314 266 ntBASIC5.62□□□□□ -1.51
NPC1L1Q9UHC9 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NPC1L1Q9UHC9 MIR4429-201ENST00000580105 73 ntBASIC5.62□□□□□ -1.51
NPC1L1Q9UHC9 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.62□□□□□ -1.51
NPC1L1Q9UHC9 AC233280.2-201ENST00000603917 1070 ntBASIC5.62□□□□□ -1.51
NPC1L1Q9UHC9 AC096586.2-201ENST00000610260 441 ntBASIC5.62□□□□□ -1.51
NPC1L1Q9UHC9 AC079298.2-201ENST00000623885 459 ntBASIC5.62□□□□□ -1.51
NPC1L1Q9UHC9 AC034229.5-201ENST00000624258 185 ntBASIC5.62□□□□□ -1.51
NPC1L1Q9UHC9 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.62□□□□□ -1.51
NPC1L1Q9UHC9 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NPC1L1Q9UHC9 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NPC1L1Q9UHC9 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC5.62□□□□□ -1.51
NPC1L1Q9UHC9 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
NPC1L1Q9UHC9 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
NPC1L1Q9UHC9 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
NPC1L1Q9UHC9 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
NPC1L1Q9UHC9 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NPC1L1Q9UHC9 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
NPC1L1Q9UHC9 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
NPC1L1Q9UHC9 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
NPC1L1Q9UHC9 MTND4LP21-201ENST00000415303 295 ntBASIC5.61□□□□□ -1.51
NPC1L1Q9UHC9 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NPC1L1Q9UHC9 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NPC1L1Q9UHC9 AC115285.1-201ENST00000424879 736 ntBASIC5.61□□□□□ -1.51
NPC1L1Q9UHC9 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC5.61□□□□□ -1.51
NPC1L1Q9UHC9 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC5.61□□□□□ -1.51
NPC1L1Q9UHC9 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.61□□□□□ -1.51
NPC1L1Q9UHC9 RPL5P32-201ENST00000454085 879 ntBASIC5.61□□□□□ -1.51
NPC1L1Q9UHC9 EIF2S2P5-201ENST00000457635 968 ntBASIC5.61□□□□□ -1.51
NPC1L1Q9UHC9 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC5.61□□□□□ -1.51
NPC1L1Q9UHC9 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.61□□□□□ -1.51
NPC1L1Q9UHC9 KRT19P6-201ENST00000510983 209 ntBASIC5.61□□□□□ -1.51
NPC1L1Q9UHC9 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NPC1L1Q9UHC9 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC5.61□□□□□ -1.51
NPC1L1Q9UHC9 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC5.61□□□□□ -1.51
NPC1L1Q9UHC9 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.61□□□□□ -1.51
NPC1L1Q9UHC9 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC5.61□□□□□ -1.51
NPC1L1Q9UHC9 AC245389.1-201ENST00000605141 529 ntBASIC5.61□□□□□ -1.51
NPC1L1Q9UHC9 MIR6867-201ENST00000610636 67 ntBASIC5.61□□□□□ -1.51
NPC1L1Q9UHC9 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.61□□□□□ -1.51
NPC1L1Q9UHC9 PDCD6IPP1-202ENST00000622242 1064 ntBASIC5.61□□□□□ -1.51
NPC1L1Q9UHC9 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.61□□□□□ -1.51
NPC1L1Q9UHC9 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.61□□□□□ -1.51
NPC1L1Q9UHC9 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.61□□□□□ -1.51
NPC1L1Q9UHC9 AC093909.5-201ENST00000621839 1799 ntBASIC5.61□□□□□ -1.51
NPC1L1Q9UHC9 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC5.61□□□□□ -1.51
NPC1L1Q9UHC9 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NPC1L1Q9UHC9 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NPC1L1Q9UHC9 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
NPC1L1Q9UHC9 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
NPC1L1Q9UHC9 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NPC1L1Q9UHC9 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NPC1L1Q9UHC9 AC027228.2-201ENST00000567141 2154 ntBASIC5.6□□□□□ -1.51
NPC1L1Q9UHC9 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NPC1L1Q9UHC9 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
NPC1L1Q9UHC9 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms