Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 MTND3P4-201ENST00000453537 303 ntBASIC3.92□□□□□ -1.78
CLCF1Q9UBD9 AP002345.1-201ENST00000456493 928 ntBASIC3.92□□□□□ -1.78
CLCF1Q9UBD9 RPL5P13-201ENST00000462840 709 ntBASIC3.92□□□□□ -1.78
CLCF1Q9UBD9 RPL23AP37-201ENST00000479658 549 ntBASIC3.92□□□□□ -1.78
CLCF1Q9UBD9 AC068587.1-201ENST00000483613 781 ntBASIC3.92□□□□□ -1.78
CLCF1Q9UBD9 RPS4XP18-201ENST00000495480 763 ntBASIC3.92□□□□□ -1.78
CLCF1Q9UBD9 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC3.92□□□□□ -1.78
CLCF1Q9UBD9 ARL4AP1-201ENST00000503220 705 ntBASIC3.92□□□□□ -1.78
CLCF1Q9UBD9 FABP5P6-201ENST00000510588 409 ntBASIC3.92□□□□□ -1.78
CLCF1Q9UBD9 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.92□□□□□ -1.78
CLCF1Q9UBD9 HMGB1P47-201ENST00000511281 589 ntBASIC3.92□□□□□ -1.78
CLCF1Q9UBD9 AC034244.2-201ENST00000514668 858 ntBASIC3.92□□□□□ -1.78
CLCF1Q9UBD9 AC016550.3-201ENST00000515706 767 ntBASIC3.92□□□□□ -1.78
CLCF1Q9UBD9 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC3.92□□□□□ -1.78
CLCF1Q9UBD9 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.92□□□□□ -1.78
CLCF1Q9UBD9 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC3.92□□□□□ -1.78
CLCF1Q9UBD9 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
CLCF1Q9UBD9 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.92□□□□□ -1.78
CLCF1Q9UBD9 ATP5J2P6-201ENST00000565203 266 ntBASIC3.92□□□□□ -1.78
CLCF1Q9UBD9 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC3.92□□□□□ -1.78
CLCF1Q9UBD9 AL008729.2-201ENST00000606393 473 ntBASIC3.92□□□□□ -1.78
CLCF1Q9UBD9 AP002360.3-201ENST00000607673 710 ntBASIC3.92□□□□□ -1.78
CLCF1Q9UBD9 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC3.92□□□□□ -1.78
CLCF1Q9UBD9 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CLCF1Q9UBD9 AL445567.2-201ENST00000618935 498 ntBASIC3.92□□□□□ -1.78
CLCF1Q9UBD9 AP001005.3-201ENST00000622049 129 ntBASIC3.92□□□□□ -1.78
CLCF1Q9UBD9 AC091905.2-201ENST00000623143 306 ntBASIC3.92□□□□□ -1.78
CLCF1Q9UBD9 AP003497.2-201ENST00000624220 967 ntBASIC3.92□□□□□ -1.78
CLCF1Q9UBD9 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC3.92□□□□□ -1.78
CLCF1Q9UBD9 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CLCF1Q9UBD9 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
CLCF1Q9UBD9 AC010300.1-201ENST00000600671 5134 ntBASIC3.92□□□□□ -1.78
CLCF1Q9UBD9 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CLCF1Q9UBD9 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CLCF1Q9UBD9 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC3.92□□□□□ -1.78
CLCF1Q9UBD9 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLCF1Q9UBD9 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLCF1Q9UBD9 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLCF1Q9UBD9 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC3.91□□□□□ -1.78
CLCF1Q9UBD9 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
CLCF1Q9UBD9 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC3.91□□□□□ -1.78
CLCF1Q9UBD9 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC3.91□□□□□ -1.78
CLCF1Q9UBD9 RPS24P12-201ENST00000402084 394 ntBASIC3.91□□□□□ -1.78
CLCF1Q9UBD9 AL133268.1-201ENST00000405676 1401 ntBASIC3.91□□□□□ -1.78
CLCF1Q9UBD9 SNORA74C-2-201ENST00000411179 201 ntBASIC3.91□□□□□ -1.78
CLCF1Q9UBD9 AL590806.1-201ENST00000415818 853 ntBASIC3.91□□□□□ -1.78
CLCF1Q9UBD9 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC3.91□□□□□ -1.78
CLCF1Q9UBD9 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC3.91□□□□□ -1.78
CLCF1Q9UBD9 RPL23AP25-201ENST00000430973 463 ntBASIC3.91□□□□□ -1.78
CLCF1Q9UBD9 TRIM60P13-201ENST00000432350 1283 ntBASIC3.91□□□□□ -1.78
CLCF1Q9UBD9 AP000936.3-201ENST00000438127 255 ntBASIC3.91□□□□□ -1.78
CLCF1Q9UBD9 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.91□□□□□ -1.78
CLCF1Q9UBD9 AL627224.1-201ENST00000448334 444 ntBASIC3.91□□□□□ -1.78
CLCF1Q9UBD9 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.91□□□□□ -1.78
CLCF1Q9UBD9 AL591363.1-201ENST00000450091 483 ntBASIC3.91□□□□□ -1.78
CLCF1Q9UBD9 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC3.91□□□□□ -1.78
CLCF1Q9UBD9 DDX39BP2-208ENST00000453923 258 ntBASIC3.91□□□□□ -1.78
CLCF1Q9UBD9 AC021205.1-201ENST00000468797 348 ntBASIC3.91□□□□□ -1.78
CLCF1Q9UBD9 UQCRHP4-201ENST00000471686 272 ntBASIC3.91□□□□□ -1.78
CLCF1Q9UBD9 AC103987.1-201ENST00000473394 348 ntBASIC3.91□□□□□ -1.78
CLCF1Q9UBD9 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC3.91□□□□□ -1.78
CLCF1Q9UBD9 AC041039.1-201ENST00000485656 536 ntBASIC3.91□□□□□ -1.78
CLCF1Q9UBD9 AC091167.1-201ENST00000492017 396 ntBASIC3.91□□□□□ -1.78
CLCF1Q9UBD9 RN7SL812P-201ENST00000493791 279 ntBASIC3.91□□□□□ -1.78
CLCF1Q9UBD9 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.91□□□□□ -1.78
CLCF1Q9UBD9 ATP6V1G1P6-201ENST00000504007 334 ntBASIC3.91□□□□□ -1.78
CLCF1Q9UBD9 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC3.91□□□□□ -1.78
CLCF1Q9UBD9 AC021146.7-201ENST00000509604 775 ntBASIC3.91□□□□□ -1.78
CLCF1Q9UBD9 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC3.91□□□□□ -1.78
CLCF1Q9UBD9 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLCF1Q9UBD9 MTCYBP19-201ENST00000517463 1124 ntBASIC3.91□□□□□ -1.78
CLCF1Q9UBD9 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC3.91□□□□□ -1.78
CLCF1Q9UBD9 IGLVVI-25-1-201ENST00000521893 249 ntBASIC3.91□□□□□ -1.78
CLCF1Q9UBD9 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC3.91□□□□□ -1.78
CLCF1Q9UBD9 AC068020.1-201ENST00000594215 661 ntBASIC3.91□□□□□ -1.78
CLCF1Q9UBD9 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC3.91□□□□□ -1.78
CLCF1Q9UBD9 IPO5P1-202ENST00000600039 287 ntBASIC3.91□□□□□ -1.78
CLCF1Q9UBD9 AC020910.2-201ENST00000603635 610 ntBASIC3.91□□□□□ -1.78
CLCF1Q9UBD9 AC012557.1-201ENST00000607115 611 ntBASIC3.91□□□□□ -1.78
CLCF1Q9UBD9 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC3.91□□□□□ -1.78
CLCF1Q9UBD9 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
CLCF1Q9UBD9 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC3.91□□□□□ -1.78
CLCF1Q9UBD9 LINC00216-201ENST00000623548 1126 ntBASIC3.91□□□□□ -1.78
CLCF1Q9UBD9 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC3.91□□□□□ -1.78
CLCF1Q9UBD9 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC3.91□□□□□ -1.78
CLCF1Q9UBD9 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.91□□□□□ -1.78
CLCF1Q9UBD9 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.91□□□□□ -1.78
CLCF1Q9UBD9 BCLAF1P2-201ENST00000624956 2609 ntBASIC3.91□□□□□ -1.78
CLCF1Q9UBD9 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CLCF1Q9UBD9 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CLCF1Q9UBD9 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CLCF1Q9UBD9 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC3.9□□□□□ -1.78
CLCF1Q9UBD9 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
CLCF1Q9UBD9 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
CLCF1Q9UBD9 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CLCF1Q9UBD9 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC3.9□□□□□ -1.78
CLCF1Q9UBD9 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
CLCF1Q9UBD9 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC3.9□□□□□ -1.79
CLCF1Q9UBD9 RNU1-132P-201ENST00000364300 164 ntBASIC3.9□□□□□ -1.79
CLCF1Q9UBD9 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms