Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 RPS3AP6-201ENST00000484430 795 ntBASIC5.45□□□□□ -1.54
PHRF1Q9P1Y6 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC5.45□□□□□ -1.54
PHRF1Q9P1Y6 PHBP17-201ENST00000528576 541 ntBASIC5.45□□□□□ -1.54
PHRF1Q9P1Y6 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PHRF1Q9P1Y6 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.45□□□□□ -1.54
PHRF1Q9P1Y6 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC5.45□□□□□ -1.54
PHRF1Q9P1Y6 AC027176.2-201ENST00000559166 746 ntBASIC5.45□□□□□ -1.54
PHRF1Q9P1Y6 AC015726.1-201ENST00000602353 681 ntBASIC5.45□□□□□ -1.54
PHRF1Q9P1Y6 OR51C1P-201ENST00000608504 942 ntBASIC5.45□□□□□ -1.54
PHRF1Q9P1Y6 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.45□□□□□ -1.54
PHRF1Q9P1Y6 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
PHRF1Q9P1Y6 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PHRF1Q9P1Y6 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PHRF1Q9P1Y6 USP8P1-201ENST00000494673 3183 ntBASIC5.44□□□□□ -1.54
PHRF1Q9P1Y6 NDUFB4P4-201ENST00000404822 243 ntBASIC5.44□□□□□ -1.54
PHRF1Q9P1Y6 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.44□□□□□ -1.54
PHRF1Q9P1Y6 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC5.44□□□□□ -1.54
PHRF1Q9P1Y6 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.44□□□□□ -1.54
PHRF1Q9P1Y6 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC5.44□□□□□ -1.54
PHRF1Q9P1Y6 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.44□□□□□ -1.54
PHRF1Q9P1Y6 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.44□□□□□ -1.54
PHRF1Q9P1Y6 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PHRF1Q9P1Y6 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PHRF1Q9P1Y6 MIR7702-201ENST00000621931 59 ntBASIC5.44□□□□□ -1.54
PHRF1Q9P1Y6 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PHRF1Q9P1Y6 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
PHRF1Q9P1Y6 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PHRF1Q9P1Y6 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PHRF1Q9P1Y6 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
PHRF1Q9P1Y6 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
PHRF1Q9P1Y6 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PHRF1Q9P1Y6 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.43□□□□□ -1.54
PHRF1Q9P1Y6 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
PHRF1Q9P1Y6 AC006971.1-201ENST00000407916 4486 ntBASIC5.43□□□□□ -1.54
PHRF1Q9P1Y6 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PHRF1Q9P1Y6 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
PHRF1Q9P1Y6 U1.1-201ENST00000384101 164 ntBASIC5.43□□□□□ -1.54
PHRF1Q9P1Y6 AC245052.5-201ENST00000416320 649 ntBASIC5.43□□□□□ -1.54
PHRF1Q9P1Y6 NPM1P34-201ENST00000428821 893 ntBASIC5.43□□□□□ -1.54
PHRF1Q9P1Y6 AC092691.2-201ENST00000461787 803 ntBASIC5.43□□□□□ -1.54
PHRF1Q9P1Y6 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
PHRF1Q9P1Y6 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC5.43□□□□□ -1.54
PHRF1Q9P1Y6 AC119751.5-201ENST00000514077 770 ntBASIC5.43□□□□□ -1.54
PHRF1Q9P1Y6 RNA5SP179-201ENST00000517284 121 ntBASIC5.43□□□□□ -1.54
PHRF1Q9P1Y6 PTS-202ENST00000524931 696 ntTSL 3 BASIC5.43□□□□□ -1.54
PHRF1Q9P1Y6 AC091516.1-201ENST00000549191 703 ntBASIC5.43□□□□□ -1.54
PHRF1Q9P1Y6 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC5.43□□□□□ -1.54
PHRF1Q9P1Y6 AP005264.7-201ENST00000625003 745 ntBASIC5.43□□□□□ -1.54
PHRF1Q9P1Y6 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC5.43□□□□□ -1.54
PHRF1Q9P1Y6 AL034408.1-202ENST00000636088 415 ntBASIC5.43□□□□□ -1.54
PHRF1Q9P1Y6 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
PHRF1Q9P1Y6 PAPPA-AS1-201ENST00000445861 2450 ntBASIC5.43□□□□□ -1.54
PHRF1Q9P1Y6 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC5.43□□□□□ -1.54
PHRF1Q9P1Y6 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.43□□□□□ -1.54
PHRF1Q9P1Y6 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
PHRF1Q9P1Y6 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PHRF1Q9P1Y6 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
PHRF1Q9P1Y6 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
PHRF1Q9P1Y6 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
PHRF1Q9P1Y6 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
PHRF1Q9P1Y6 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
PHRF1Q9P1Y6 MIR30B-201ENST00000384850 88 ntBASIC5.42□□□□□ -1.54
PHRF1Q9P1Y6 SYF2P2-201ENST00000417620 583 ntBASIC5.42□□□□□ -1.54
PHRF1Q9P1Y6 AL121878.1-201ENST00000418638 859 ntBASIC5.42□□□□□ -1.54
PHRF1Q9P1Y6 RBMY1KP-201ENST00000423480 476 ntBASIC5.42□□□□□ -1.54
PHRF1Q9P1Y6 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC5.42□□□□□ -1.54
PHRF1Q9P1Y6 RNA5SP103-201ENST00000459503 118 ntBASIC5.42□□□□□ -1.54
PHRF1Q9P1Y6 RPS26P28-201ENST00000470806 348 ntBASIC5.42□□□□□ -1.54
PHRF1Q9P1Y6 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC5.42□□□□□ -1.54
PHRF1Q9P1Y6 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC5.42□□□□□ -1.54
PHRF1Q9P1Y6 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC5.42□□□□□ -1.54
PHRF1Q9P1Y6 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC5.42□□□□□ -1.54
PHRF1Q9P1Y6 AC096553.1-201ENST00000605169 829 ntBASIC5.42□□□□□ -1.54
PHRF1Q9P1Y6 AC073530.2-201ENST00000623987 261 ntBASIC5.42□□□□□ -1.54
PHRF1Q9P1Y6 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PHRF1Q9P1Y6 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
PHRF1Q9P1Y6 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PHRF1Q9P1Y6 AL079305.1-201ENST00000623159 3008 ntBASIC5.42□□□□□ -1.54
PHRF1Q9P1Y6 AP001273.1-201ENST00000624493 3152 ntBASIC5.42□□□□□ -1.54
PHRF1Q9P1Y6 RN7SKP74-201ENST00000362849 309 ntBASIC5.41□□□□□ -1.54
PHRF1Q9P1Y6 MIR218-2-201ENST00000385006 110 ntBASIC5.41□□□□□ -1.54
PHRF1Q9P1Y6 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
PHRF1Q9P1Y6 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.41□□□□□ -1.54
PHRF1Q9P1Y6 RPL7P4-203ENST00000430239 730 ntBASIC5.41□□□□□ -1.54
PHRF1Q9P1Y6 AC104978.1-201ENST00000449387 391 ntBASIC5.41□□□□□ -1.54
PHRF1Q9P1Y6 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.41□□□□□ -1.54
PHRF1Q9P1Y6 USP9YP2-201ENST00000504503 1000 ntBASIC5.41□□□□□ -1.54
PHRF1Q9P1Y6 USP9YP1-201ENST00000513521 1002 ntBASIC5.41□□□□□ -1.54
PHRF1Q9P1Y6 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.41□□□□□ -1.54
PHRF1Q9P1Y6 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PHRF1Q9P1Y6 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.41□□□□□ -1.54
PHRF1Q9P1Y6 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.41□□□□□ -1.54
PHRF1Q9P1Y6 AC064801.1-201ENST00000612025 407 ntBASIC5.41□□□□□ -1.54
PHRF1Q9P1Y6 AP001642.1-201ENST00000624727 2117 ntBASIC5.41□□□□□ -1.54
PHRF1Q9P1Y6 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.41□□□□□ -1.54
PHRF1Q9P1Y6 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.41□□□□□ -1.54
PHRF1Q9P1Y6 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
PHRF1Q9P1Y6 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PHRF1Q9P1Y6 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PHRF1Q9P1Y6 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 143.7 ms