Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.89□□□□□ -1.47
VTA1Q9NP79 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.89□□□□□ -1.47
VTA1Q9NP79 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.89□□□□□ -1.47
VTA1Q9NP79 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.89□□□□□ -1.47
VTA1Q9NP79 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.89□□□□□ -1.47
VTA1Q9NP79 AC022031.1-201ENST00000585985 2593 ntBASIC5.89□□□□□ -1.47
VTA1Q9NP79 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
VTA1Q9NP79 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VTA1Q9NP79 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
VTA1Q9NP79 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.89□□□□□ -1.47
VTA1Q9NP79 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
VTA1Q9NP79 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
VTA1Q9NP79 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
VTA1Q9NP79 DBF4P1-201ENST00000412976 1892 ntBASIC5.88□□□□□ -1.47
VTA1Q9NP79 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
VTA1Q9NP79 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.88□□□□□ -1.47
VTA1Q9NP79 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.88□□□□□ -1.47
VTA1Q9NP79 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
VTA1Q9NP79 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
VTA1Q9NP79 RNA5SP455-201ENST00000365190 119 ntBASIC5.88□□□□□ -1.47
VTA1Q9NP79 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
VTA1Q9NP79 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
VTA1Q9NP79 COX6B1P1-201ENST00000415962 213 ntBASIC5.88□□□□□ -1.47
VTA1Q9NP79 AC114814.2-201ENST00000419195 485 ntBASIC5.88□□□□□ -1.47
VTA1Q9NP79 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.88□□□□□ -1.47
VTA1Q9NP79 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.88□□□□□ -1.47
VTA1Q9NP79 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC5.88□□□□□ -1.47
VTA1Q9NP79 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC5.88□□□□□ -1.47
VTA1Q9NP79 AC009784.1-201ENST00000426484 460 ntBASIC5.88□□□□□ -1.47
VTA1Q9NP79 AC073069.1-201ENST00000428657 441 ntBASIC5.88□□□□□ -1.47
VTA1Q9NP79 AL161722.2-201ENST00000434731 981 ntBASIC5.88□□□□□ -1.47
VTA1Q9NP79 AC073143.1-201ENST00000436316 395 ntBASIC5.88□□□□□ -1.47
VTA1Q9NP79 AC092809.1-201ENST00000441469 474 ntBASIC5.88□□□□□ -1.47
VTA1Q9NP79 HMGB1P16-201ENST00000447155 540 ntBASIC5.88□□□□□ -1.47
VTA1Q9NP79 RSL24D1P3-201ENST00000449255 495 ntBASIC5.88□□□□□ -1.47
VTA1Q9NP79 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.88□□□□□ -1.47
VTA1Q9NP79 AC007686.1-201ENST00000488511 463 ntBASIC5.88□□□□□ -1.47
VTA1Q9NP79 RN7SL591P-201ENST00000496150 292 ntBASIC5.88□□□□□ -1.47
VTA1Q9NP79 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.88□□□□□ -1.47
VTA1Q9NP79 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.88□□□□□ -1.47
VTA1Q9NP79 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC5.88□□□□□ -1.47
VTA1Q9NP79 AC006427.1-201ENST00000514359 712 ntBASIC5.88□□□□□ -1.47
VTA1Q9NP79 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.88□□□□□ -1.47
VTA1Q9NP79 OR4A43P-201ENST00000532938 908 ntBASIC5.88□□□□□ -1.47
VTA1Q9NP79 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC5.88□□□□□ -1.47
VTA1Q9NP79 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.88□□□□□ -1.47
VTA1Q9NP79 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.88□□□□□ -1.47
VTA1Q9NP79 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.88□□□□□ -1.47
VTA1Q9NP79 MIR4691-201ENST00000583764 85 ntBASIC5.88□□□□□ -1.47
VTA1Q9NP79 AC009220.3-201ENST00000604318 586 ntBASIC5.88□□□□□ -1.47
VTA1Q9NP79 AL162431.4-201ENST00000604674 411 ntBASIC5.88□□□□□ -1.47
VTA1Q9NP79 AL451064.1-201ENST00000607718 471 ntBASIC5.88□□□□□ -1.47
VTA1Q9NP79 AL627230.1-201ENST00000613077 211 ntBASIC5.88□□□□□ -1.47
VTA1Q9NP79 AL392048.1-201ENST00000613946 534 ntBASIC5.88□□□□□ -1.47
VTA1Q9NP79 AC105227.2-201ENST00000615075 605 ntBASIC5.88□□□□□ -1.47
VTA1Q9NP79 AL591926.8-201ENST00000616876 211 ntBASIC5.88□□□□□ -1.47
VTA1Q9NP79 AC087385.3-201ENST00000620477 187 ntBASIC5.88□□□□□ -1.47
VTA1Q9NP79 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
VTA1Q9NP79 AC067852.7-201ENST00000623270 535 ntBASIC5.88□□□□□ -1.47
VTA1Q9NP79 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
VTA1Q9NP79 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
VTA1Q9NP79 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
VTA1Q9NP79 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.88□□□□□ -1.47
VTA1Q9NP79 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.88□□□□□ -1.47
VTA1Q9NP79 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
VTA1Q9NP79 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
VTA1Q9NP79 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
VTA1Q9NP79 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.88□□□□□ -1.47
VTA1Q9NP79 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
VTA1Q9NP79 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
VTA1Q9NP79 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.87□□□□□ -1.47
VTA1Q9NP79 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.87□□□□□ -1.47
VTA1Q9NP79 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
VTA1Q9NP79 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
VTA1Q9NP79 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.87□□□□□ -1.47
VTA1Q9NP79 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
VTA1Q9NP79 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
VTA1Q9NP79 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.87□□□□□ -1.47
VTA1Q9NP79 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VTA1Q9NP79 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
VTA1Q9NP79 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VTA1Q9NP79 BMS1P3-201ENST00000372011 932 ntBASIC5.87□□□□□ -1.47
VTA1Q9NP79 RNA5SP87-201ENST00000384155 118 ntBASIC5.87□□□□□ -1.47
VTA1Q9NP79 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
VTA1Q9NP79 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
VTA1Q9NP79 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC5.87□□□□□ -1.47
VTA1Q9NP79 OR51A3P-201ENST00000413596 924 ntBASIC5.87□□□□□ -1.47
VTA1Q9NP79 BLOC1S2P1-201ENST00000428431 301 ntBASIC5.87□□□□□ -1.47
VTA1Q9NP79 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC5.87□□□□□ -1.47
VTA1Q9NP79 AC124944.2-201ENST00000429866 1242 ntBASIC5.87□□□□□ -1.47
VTA1Q9NP79 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC5.87□□□□□ -1.47
VTA1Q9NP79 NDUFB4P8-201ENST00000435351 367 ntBASIC5.87□□□□□ -1.47
VTA1Q9NP79 FGF7P5-201ENST00000441829 291 ntBASIC5.87□□□□□ -1.47
VTA1Q9NP79 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC5.87□□□□□ -1.47
VTA1Q9NP79 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.87□□□□□ -1.47
VTA1Q9NP79 AC079776.3-201ENST00000450665 370 ntBASIC5.87□□□□□ -1.47
VTA1Q9NP79 AC022431.1-201ENST00000450941 438 ntBASIC5.87□□□□□ -1.47
VTA1Q9NP79 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC5.87□□□□□ -1.47
VTA1Q9NP79 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.87□□□□□ -1.47
VTA1Q9NP79 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms