Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 MAL2-203ENST00000534619 578 ntTSL 4 BASIC6.08□□□□□ -1.44
SSU72Q9NP77 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SSU72Q9NP77 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC6.08□□□□□ -1.44
SSU72Q9NP77 RPL21P5-201ENST00000554662 472 ntBASIC6.08□□□□□ -1.44
SSU72Q9NP77 AL390334.1-201ENST00000556395 450 ntBASIC6.08□□□□□ -1.44
SSU72Q9NP77 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.08□□□□□ -1.44
SSU72Q9NP77 RPL12P25-202ENST00000598100 674 ntBASIC6.08□□□□□ -1.44
SSU72Q9NP77 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC6.08□□□□□ -1.44
SSU72Q9NP77 AL391646.1-201ENST00000603860 190 ntBASIC6.08□□□□□ -1.44
SSU72Q9NP77 AC097468.3-201ENST00000607956 456 ntBASIC6.08□□□□□ -1.44
SSU72Q9NP77 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.08□□□□□ -1.44
SSU72Q9NP77 AL356274.1-201ENST00000617064 410 ntBASIC6.08□□□□□ -1.44
SSU72Q9NP77 AL355480.4-201ENST00000626823 69 ntBASIC6.08□□□□□ -1.44
SSU72Q9NP77 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC6.08□□□□□ -1.44
SSU72Q9NP77 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC6.08□□□□□ -1.44
SSU72Q9NP77 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
SSU72Q9NP77 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.08□□□□□ -1.44
SSU72Q9NP77 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.08□□□□□ -1.44
SSU72Q9NP77 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SSU72Q9NP77 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SSU72Q9NP77 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
SSU72Q9NP77 AC130304.1-201ENST00000622942 2385 ntBASIC6.08□□□□□ -1.44
SSU72Q9NP77 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
SSU72Q9NP77 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SSU72Q9NP77 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
SSU72Q9NP77 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
SSU72Q9NP77 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC6.08□□□□□ -1.44
SSU72Q9NP77 AC245100.2-201ENST00000454544 1679 ntBASIC6.07□□□□□ -1.44
SSU72Q9NP77 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SSU72Q9NP77 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SSU72Q9NP77 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.07□□□□□ -1.44
SSU72Q9NP77 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SSU72Q9NP77 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SSU72Q9NP77 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SSU72Q9NP77 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SSU72Q9NP77 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SSU72Q9NP77 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SSU72Q9NP77 OR4A15-201ENST00000314706 1035 ntBASIC6.07□□□□□ -1.44
SSU72Q9NP77 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
SSU72Q9NP77 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
SSU72Q9NP77 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC6.07□□□□□ -1.44
SSU72Q9NP77 RNU6-1227P-201ENST00000383981 107 ntBASIC6.07□□□□□ -1.44
SSU72Q9NP77 RNU6-1122P-201ENST00000384449 107 ntBASIC6.07□□□□□ -1.44
SSU72Q9NP77 SNRPEP2-201ENST00000397592 279 ntBASIC6.07□□□□□ -1.44
SSU72Q9NP77 PEX12P1-201ENST00000400284 1048 ntBASIC6.07□□□□□ -1.44
SSU72Q9NP77 Z97832.1-201ENST00000402490 328 ntBASIC6.07□□□□□ -1.44
SSU72Q9NP77 RN7SKP221-201ENST00000410420 301 ntBASIC6.07□□□□□ -1.44
SSU72Q9NP77 RNU2-5P-201ENST00000410533 180 ntBASIC6.07□□□□□ -1.44
SSU72Q9NP77 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SSU72Q9NP77 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC6.07□□□□□ -1.44
SSU72Q9NP77 ZNF90P2-204ENST00000419323 1075 ntBASIC6.07□□□□□ -1.44
SSU72Q9NP77 AC083875.1-201ENST00000419509 405 ntBASIC6.07□□□□□ -1.44
SSU72Q9NP77 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC6.07□□□□□ -1.44
SSU72Q9NP77 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SSU72Q9NP77 USP9YP9-201ENST00000429406 715 ntBASIC6.07□□□□□ -1.44
SSU72Q9NP77 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.07□□□□□ -1.44
SSU72Q9NP77 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC6.07□□□□□ -1.44
SSU72Q9NP77 RAD23BP3-201ENST00000454157 1152 ntBASIC6.07□□□□□ -1.44
SSU72Q9NP77 AC239798.3-201ENST00000454459 408 ntBASIC6.07□□□□□ -1.44
SSU72Q9NP77 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC6.07□□□□□ -1.44
SSU72Q9NP77 RPL12P31-201ENST00000478433 450 ntBASIC6.07□□□□□ -1.44
SSU72Q9NP77 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC6.07□□□□□ -1.44
SSU72Q9NP77 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC6.07□□□□□ -1.44
SSU72Q9NP77 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.07□□□□□ -1.44
SSU72Q9NP77 AC027309.2-201ENST00000520566 192 ntBASIC6.07□□□□□ -1.44
SSU72Q9NP77 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.07□□□□□ -1.44
SSU72Q9NP77 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SSU72Q9NP77 AC013828.2-201ENST00000532487 235 ntBASIC6.07□□□□□ -1.44
SSU72Q9NP77 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC6.07□□□□□ -1.44
SSU72Q9NP77 HPRT1P3-201ENST00000539521 576 ntBASIC6.07□□□□□ -1.44
SSU72Q9NP77 AC126615.2-201ENST00000553003 515 ntBASIC6.07□□□□□ -1.44
SSU72Q9NP77 AL442663.2-201ENST00000554385 511 ntBASIC6.07□□□□□ -1.44
SSU72Q9NP77 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.07□□□□□ -1.44
SSU72Q9NP77 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC6.07□□□□□ -1.44
SSU72Q9NP77 LINC02284-201ENST00000558120 573 ntTSL 5 BASIC6.07□□□□□ -1.44
SSU72Q9NP77 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.07□□□□□ -1.44
SSU72Q9NP77 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC6.07□□□□□ -1.44
SSU72Q9NP77 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.07□□□□□ -1.44
SSU72Q9NP77 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.07□□□□□ -1.44
SSU72Q9NP77 RN7SL131P-201ENST00000579043 256 ntBASIC6.07□□□□□ -1.44
SSU72Q9NP77 AC087283.1-201ENST00000604029 1074 ntBASIC6.07□□□□□ -1.44
SSU72Q9NP77 AC008555.7-201ENST00000605008 583 ntBASIC6.07□□□□□ -1.44
SSU72Q9NP77 AL050343.2-201ENST00000607338 280 ntBASIC6.07□□□□□ -1.44
SSU72Q9NP77 AC018926.3-201ENST00000618841 406 ntBASIC6.07□□□□□ -1.44
SSU72Q9NP77 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC6.07□□□□□ -1.44
SSU72Q9NP77 YWHAEP7-203ENST00000622054 312 ntBASIC6.07□□□□□ -1.44
SSU72Q9NP77 TEX41-254ENST00000626394 423 ntTSL 5 BASIC6.07□□□□□ -1.44
SSU72Q9NP77 AC006453.3-201ENST00000635891 377 ntBASIC6.07□□□□□ -1.44
SSU72Q9NP77 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SSU72Q9NP77 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
SSU72Q9NP77 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
SSU72Q9NP77 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
SSU72Q9NP77 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC6.07□□□□□ -1.44
SSU72Q9NP77 DBF4P1-201ENST00000412976 1892 ntBASIC6.07□□□□□ -1.44
SSU72Q9NP77 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SSU72Q9NP77 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SSU72Q9NP77 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
SSU72Q9NP77 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
SSU72Q9NP77 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
SSU72Q9NP77 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms