Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 AKIRIN1P1-201ENST00000547384 544 ntBASIC5.81□□□□□ -1.48
CD248Q9HCU0 HSPE1P2-201ENST00000554777 306 ntBASIC5.81□□□□□ -1.48
CD248Q9HCU0 AC245505.1-201ENST00000556398 224 ntBASIC5.81□□□□□ -1.48
CD248Q9HCU0 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC5.81□□□□□ -1.48
CD248Q9HCU0 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.81□□□□□ -1.48
CD248Q9HCU0 ELOCP28-201ENST00000590044 317 ntBASIC5.81□□□□□ -1.48
CD248Q9HCU0 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC5.81□□□□□ -1.48
CD248Q9HCU0 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
CD248Q9HCU0 AC126118.1-201ENST00000607744 628 ntBASIC5.81□□□□□ -1.48
CD248Q9HCU0 OR2BH1P-201ENST00000608850 864 ntBASIC5.81□□□□□ -1.48
CD248Q9HCU0 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC5.81□□□□□ -1.48
CD248Q9HCU0 FRG1HP-204ENST00000617940 757 ntBASIC5.81□□□□□ -1.48
CD248Q9HCU0 AC015722.2-201ENST00000622210 551 ntBASIC5.81□□□□□ -1.48
CD248Q9HCU0 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CD248Q9HCU0 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.81□□□□□ -1.48
CD248Q9HCU0 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CD248Q9HCU0 AC114786.1-201ENST00000512892 1415 ntBASIC5.81□□□□□ -1.48
CD248Q9HCU0 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CD248Q9HCU0 AC010329.2-201ENST00000595195 2737 ntBASIC5.81□□□□□ -1.48
CD248Q9HCU0 AL078621.3-201ENST00000623707 2042 ntBASIC5.81□□□□□ -1.48
CD248Q9HCU0 AC011755.1-201ENST00000623763 2049 ntBASIC5.81□□□□□ -1.48
CD248Q9HCU0 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
CD248Q9HCU0 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CD248Q9HCU0 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CD248Q9HCU0 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CD248Q9HCU0 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.8□□□□□ -1.48
CD248Q9HCU0 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
CD248Q9HCU0 RNA5SP183-201ENST00000362452 119 ntBASIC5.8□□□□□ -1.48
CD248Q9HCU0 RNA5SP30-201ENST00000365552 115 ntBASIC5.8□□□□□ -1.48
CD248Q9HCU0 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC5.8□□□□□ -1.48
CD248Q9HCU0 U3.28-201ENST00000391249 210 ntBASIC5.8□□□□□ -1.48
CD248Q9HCU0 AC211486.3-201ENST00000412694 621 ntBASIC5.8□□□□□ -1.48
CD248Q9HCU0 NPM1P40-201ENST00000412758 733 ntBASIC5.8□□□□□ -1.48
CD248Q9HCU0 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.8□□□□□ -1.48
CD248Q9HCU0 GTF2IP2-201ENST00000424290 697 ntBASIC5.8□□□□□ -1.48
CD248Q9HCU0 YWHAZP7-201ENST00000436906 631 ntBASIC5.8□□□□□ -1.48
CD248Q9HCU0 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.8□□□□□ -1.48
CD248Q9HCU0 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC5.8□□□□□ -1.48
CD248Q9HCU0 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC5.8□□□□□ -1.48
CD248Q9HCU0 AC015983.1-201ENST00000441577 373 ntBASIC5.8□□□□□ -1.48
CD248Q9HCU0 CDC27P1-201ENST00000445384 715 ntBASIC5.8□□□□□ -1.48
CD248Q9HCU0 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC5.8□□□□□ -1.48
CD248Q9HCU0 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.8□□□□□ -1.48
CD248Q9HCU0 RN7SL570P-201ENST00000484405 292 ntBASIC5.8□□□□□ -1.48
CD248Q9HCU0 COX6B1P2-201ENST00000489624 230 ntBASIC5.8□□□□□ -1.48
CD248Q9HCU0 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.8□□□□□ -1.48
CD248Q9HCU0 AC091965.2-201ENST00000512324 613 ntBASIC5.8□□□□□ -1.48
CD248Q9HCU0 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.8□□□□□ -1.48
CD248Q9HCU0 NDUFA5P2-201ENST00000519723 344 ntBASIC5.8□□□□□ -1.48
CD248Q9HCU0 C1GALT1P3-201ENST00000522049 819 ntBASIC5.8□□□□□ -1.48
CD248Q9HCU0 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC5.8□□□□□ -1.48
CD248Q9HCU0 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.8□□□□□ -1.48
CD248Q9HCU0 ADI1P3-201ENST00000549509 470 ntBASIC5.8□□□□□ -1.48
CD248Q9HCU0 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC5.8□□□□□ -1.48
CD248Q9HCU0 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC5.8□□□□□ -1.48
CD248Q9HCU0 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.8□□□□□ -1.48
CD248Q9HCU0 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.8□□□□□ -1.48
CD248Q9HCU0 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.8□□□□□ -1.48
CD248Q9HCU0 FKBP1AP1-201ENST00000594588 318 ntBASIC5.8□□□□□ -1.48
CD248Q9HCU0 AC022146.1-201ENST00000595307 847 ntBASIC5.8□□□□□ -1.48
CD248Q9HCU0 AL031281.1-201ENST00000604049 488 ntBASIC5.8□□□□□ -1.48
CD248Q9HCU0 AC005377.1-201ENST00000605126 456 ntBASIC5.8□□□□□ -1.48
CD248Q9HCU0 AL133481.2-203ENST00000607558 139 ntBASIC5.8□□□□□ -1.48
CD248Q9HCU0 AC019131.2-201ENST00000609071 870 ntBASIC5.8□□□□□ -1.48
CD248Q9HCU0 RMST_10.1-201ENST00000616309 154 ntBASIC5.8□□□□□ -1.48
CD248Q9HCU0 AC095031.1-201ENST00000623685 672 ntBASIC5.8□□□□□ -1.48
CD248Q9HCU0 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.8□□□□□ -1.48
CD248Q9HCU0 AC007938.2-201ENST00000604666 2634 ntBASIC5.8□□□□□ -1.48
CD248Q9HCU0 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.8□□□□□ -1.48
CD248Q9HCU0 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CD248Q9HCU0 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.8□□□□□ -1.48
CD248Q9HCU0 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
CD248Q9HCU0 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CD248Q9HCU0 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
CD248Q9HCU0 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.8□□□□□ -1.48
CD248Q9HCU0 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
CD248Q9HCU0 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
CD248Q9HCU0 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.79□□□□□ -1.48
CD248Q9HCU0 AL590763.1-201ENST00000398297 1545 ntBASIC5.79□□□□□ -1.48
CD248Q9HCU0 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CD248Q9HCU0 AC109780.1-201ENST00000451768 1344 ntBASIC5.79□□□□□ -1.48
CD248Q9HCU0 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.79□□□□□ -1.48
CD248Q9HCU0 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
CD248Q9HCU0 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CD248Q9HCU0 RNU6-252P-201ENST00000363232 107 ntBASIC5.79□□□□□ -1.48
CD248Q9HCU0 SNORD56.4-201ENST00000363883 71 ntBASIC5.79□□□□□ -1.48
CD248Q9HCU0 SNORD116.1-201ENST00000365628 92 ntBASIC5.79□□□□□ -1.48
CD248Q9HCU0 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CD248Q9HCU0 SNORA68.2-201ENST00000391263 128 ntBASIC5.79□□□□□ -1.48
CD248Q9HCU0 ATF1P1-201ENST00000406040 927 ntBASIC5.79□□□□□ -1.48
CD248Q9HCU0 NPM1P11-201ENST00000417106 855 ntBASIC5.79□□□□□ -1.48
CD248Q9HCU0 AC007394.1-201ENST00000421941 531 ntBASIC5.79□□□□□ -1.48
CD248Q9HCU0 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.79□□□□□ -1.48
CD248Q9HCU0 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.79□□□□□ -1.48
CD248Q9HCU0 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.79□□□□□ -1.48
CD248Q9HCU0 CLUHP1-201ENST00000435012 1190 ntBASIC5.79□□□□□ -1.48
CD248Q9HCU0 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC5.79□□□□□ -1.48
CD248Q9HCU0 USP9YP22-201ENST00000438971 294 ntBASIC5.79□□□□□ -1.48
CD248Q9HCU0 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CD248Q9HCU0 CASP3P1-201ENST00000446037 609 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms