Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM2Q9C040 AC090114.3-201ENST00000479267 829 ntBASIC4.89□□□□□ -1.63
TRIM2Q9C040 RN7SL547P-201ENST00000490793 290 ntBASIC4.89□□□□□ -1.63
TRIM2Q9C040 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.89□□□□□ -1.63
TRIM2Q9C040 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM2Q9C040 MRPS33P3-201ENST00000513456 322 ntBASIC4.89□□□□□ -1.63
TRIM2Q9C040 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM2Q9C040 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM2Q9C040 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM2Q9C040 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.89□□□□□ -1.63
TRIM2Q9C040 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC4.89□□□□□ -1.63
TRIM2Q9C040 PDCL2P2-201ENST00000533651 189 ntBASIC4.89□□□□□ -1.63
TRIM2Q9C040 ERP27-202ENST00000540097 993 ntTSL 2 BASIC4.89□□□□□ -1.63
TRIM2Q9C040 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC4.89□□□□□ -1.63
TRIM2Q9C040 AL442163.2-201ENST00000553912 710 ntBASIC4.89□□□□□ -1.63
TRIM2Q9C040 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.89□□□□□ -1.63
TRIM2Q9C040 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM2Q9C040 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.89□□□□□ -1.63
TRIM2Q9C040 AC022662.1-201ENST00000580252 331 ntBASIC4.89□□□□□ -1.63
TRIM2Q9C040 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.89□□□□□ -1.63
TRIM2Q9C040 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.89□□□□□ -1.63
TRIM2Q9C040 AC011453.2-201ENST00000603737 729 ntBASIC4.89□□□□□ -1.63
TRIM2Q9C040 IMMP1LP3-201ENST00000604197 224 ntBASIC4.89□□□□□ -1.63
TRIM2Q9C040 AC013244.1-201ENST00000604279 193 ntBASIC4.89□□□□□ -1.63
TRIM2Q9C040 AC080013.3-201ENST00000606839 578 ntBASIC4.89□□□□□ -1.63
TRIM2Q9C040 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC4.89□□□□□ -1.63
TRIM2Q9C040 AC245008.1-201ENST00000608123 476 ntBASIC4.89□□□□□ -1.63
TRIM2Q9C040 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM2Q9C040 MIR6839-201ENST00000620425 113 ntBASIC4.89□□□□□ -1.63
TRIM2Q9C040 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
TRIM2Q9C040 CASC19-284ENST00000642142 1868 ntBASIC4.89□□□□□ -1.63
TRIM2Q9C040 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.89□□□□□ -1.63
TRIM2Q9C040 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
TRIM2Q9C040 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.89□□□□□ -1.63
TRIM2Q9C040 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM2Q9C040 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM2Q9C040 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.89□□□□□ -1.63
TRIM2Q9C040 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.89□□□□□ -1.63
TRIM2Q9C040 SMG1P4-204ENST00000523028 4131 ntBASIC4.89□□□□□ -1.63
TRIM2Q9C040 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
TRIM2Q9C040 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM2Q9C040 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM2Q9C040 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM2Q9C040 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM2Q9C040 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM2Q9C040 AC104623.2-202ENST00000623477 4002 ntBASIC4.88□□□□□ -1.63
TRIM2Q9C040 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM2Q9C040 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.88□□□□□ -1.63
TRIM2Q9C040 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.88□□□□□ -1.63
TRIM2Q9C040 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM2Q9C040 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
TRIM2Q9C040 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.88□□□□□ -1.63
TRIM2Q9C040 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM2Q9C040 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM2Q9C040 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
TRIM2Q9C040 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
TRIM2Q9C040 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM2Q9C040 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM2Q9C040 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
TRIM2Q9C040 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM2Q9C040 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM2Q9C040 AC019155.1-201ENST00000382242 574 ntBASIC4.88□□□□□ -1.63
TRIM2Q9C040 MIR525-201ENST00000384978 85 ntBASIC4.88□□□□□ -1.63
TRIM2Q9C040 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
TRIM2Q9C040 RSL24D1P4-201ENST00000400938 484 ntBASIC4.88□□□□□ -1.63
TRIM2Q9C040 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.88□□□□□ -1.63
TRIM2Q9C040 SNORA11C-201ENST00000408532 129 ntBASIC4.88□□□□□ -1.63
TRIM2Q9C040 RNA5SP487-201ENST00000410186 122 ntBASIC4.88□□□□□ -1.63
TRIM2Q9C040 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.88□□□□□ -1.63
TRIM2Q9C040 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.88□□□□□ -1.63
TRIM2Q9C040 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.88□□□□□ -1.63
TRIM2Q9C040 USP9YP26-201ENST00000421008 661 ntBASIC4.88□□□□□ -1.63
TRIM2Q9C040 AC011233.1-201ENST00000422812 283 ntBASIC4.88□□□□□ -1.63
TRIM2Q9C040 USP9YP11-201ENST00000427537 717 ntBASIC4.88□□□□□ -1.63
TRIM2Q9C040 AP001324.1-201ENST00000428553 399 ntBASIC4.88□□□□□ -1.63
TRIM2Q9C040 BRWD1P3-201ENST00000428816 390 ntBASIC4.88□□□□□ -1.63
TRIM2Q9C040 RPS11P7-201ENST00000442125 465 ntBASIC4.88□□□□□ -1.63
TRIM2Q9C040 AC234781.3-201ENST00000452540 973 ntBASIC4.88□□□□□ -1.63
TRIM2Q9C040 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.88□□□□□ -1.63
TRIM2Q9C040 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC4.88□□□□□ -1.63
TRIM2Q9C040 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.88□□□□□ -1.63
TRIM2Q9C040 AC100832.1-201ENST00000471945 383 ntBASIC4.88□□□□□ -1.63
TRIM2Q9C040 AC011979.1-201ENST00000472300 483 ntBASIC4.88□□□□□ -1.63
TRIM2Q9C040 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.88□□□□□ -1.63
TRIM2Q9C040 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.88□□□□□ -1.63
TRIM2Q9C040 RPL15P21-201ENST00000495592 567 ntBASIC4.88□□□□□ -1.63
TRIM2Q9C040 AC090638.1-201ENST00000498296 909 ntBASIC4.88□□□□□ -1.63
TRIM2Q9C040 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.88□□□□□ -1.63
TRIM2Q9C040 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.88□□□□□ -1.63
TRIM2Q9C040 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.88□□□□□ -1.63
TRIM2Q9C040 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.88□□□□□ -1.63
TRIM2Q9C040 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC4.88□□□□□ -1.63
TRIM2Q9C040 RNA5SP34-201ENST00000516887 130 ntBASIC4.88□□□□□ -1.63
TRIM2Q9C040 IGLV2-28-201ENST00000520681 304 ntBASIC4.88□□□□□ -1.63
TRIM2Q9C040 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.88□□□□□ -1.63
TRIM2Q9C040 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC4.88□□□□□ -1.63
TRIM2Q9C040 AL356057.1-201ENST00000533798 831 ntBASIC4.88□□□□□ -1.63
TRIM2Q9C040 AC027369.5-201ENST00000533838 755 ntBASIC4.88□□□□□ -1.63
TRIM2Q9C040 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.88□□□□□ -1.63
TRIM2Q9C040 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms