Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM54Q9BYV2 MAPK10-338ENST00000641647 3362 ntBASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 AP000542.2-201ENST00000623199 6179 ntBASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 SGO1P2-201ENST00000429458 1589 ntBASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 ADAM5-202ENST00000399789 1942 ntBASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 FAM3C2-201ENST00000312214 681 ntBASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 RNU6-839P-201ENST00000363347 108 ntBASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 GSTM3P2-201ENST00000412746 530 ntBASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 COX5BP7-201ENST00000414780 274 ntBASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 BLOC1S2P1-201ENST00000428431 301 ntBASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 YWHAZP7-201ENST00000436906 631 ntBASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 AL354941.1-201ENST00000438600 464 ntBASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 AC093155.1-201ENST00000440164 826 ntBASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 NPM1P19-201ENST00000450070 712 ntBASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 GAPDHP14-201ENST00000450472 937 ntBASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 PRPF38AP1-201ENST00000451976 933 ntBASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 RFC5P1-201ENST00000454419 874 ntBASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 RPL5P24-201ENST00000463742 885 ntBASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 AC100832.1-201ENST00000471945 383 ntBASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 AC126121.1-201ENST00000482313 553 ntBASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 RN7SL447P-201ENST00000494711 245 ntBASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 MTCYBP16-201ENST00000509187 1129 ntBASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 MTATP6P1-201ENST00000514057 681 ntBASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 AC087373.1-201ENST00000524920 491 ntBASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 HMGB1P40-201ENST00000525121 540 ntBASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 AC005832.3-201ENST00000537929 631 ntBASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 AC022069.1-201ENST00000582910 658 ntBASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 PRPF19P1-201ENST00000584766 898 ntBASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 AC115085.1-201ENST00000588924 229 ntBASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 AC010620.1-201ENST00000601088 1102 ntBASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 VN1R82P-201ENST00000601481 356 ntBASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 AC004943.3-201ENST00000624116 600 ntBASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 AC116563.2-201ENST00000624751 535 ntBASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 AC068620.4-201ENST00000636730 1182 ntBASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 AC093775.1-201ENST00000624154 1868 ntBASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 AC092079.1-201ENST00000558620 1985 ntBASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 MAPK6PS3-201ENST00000403865 2162 ntBASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 AC009313.2-201ENST00000417893 1941 ntBASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM54Q9BYV2 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM54Q9BYV2 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM54Q9BYV2 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
TRIM54Q9BYV2 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM54Q9BYV2 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
TRIM54Q9BYV2 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
TRIM54Q9BYV2 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM54Q9BYV2 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM54Q9BYV2 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC5.24□□□□□ -1.57
TRIM54Q9BYV2 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.24□□□□□ -1.57
TRIM54Q9BYV2 RNA5SP487-201ENST00000410186 122 ntBASIC5.24□□□□□ -1.57
TRIM54Q9BYV2 RNU6-757P-201ENST00000410334 100 ntBASIC5.24□□□□□ -1.57
TRIM54Q9BYV2 RNA5SP80-201ENST00000410475 111 ntBASIC5.24□□□□□ -1.57
TRIM54Q9BYV2 RNU6-272P-201ENST00000411028 104 ntBASIC5.24□□□□□ -1.57
TRIM54Q9BYV2 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC5.24□□□□□ -1.57
TRIM54Q9BYV2 TEX41-202ENST00000414256 604 ntTSL 5 BASIC5.24□□□□□ -1.57
TRIM54Q9BYV2 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.24□□□□□ -1.57
TRIM54Q9BYV2 USP9YP26-201ENST00000421008 661 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms