Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
AP1S3Q96PC3 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
AP1S3Q96PC3 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
AP1S3Q96PC3 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.2□□□□□ -1.9
AP1S3Q96PC3 ERCC6-202ENST00000374127 1782 ntBASIC3.2□□□□□ -1.9
AP1S3Q96PC3 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
AP1S3Q96PC3 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
AP1S3Q96PC3 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.2□□□□□ -1.9
AP1S3Q96PC3 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC3.2□□□□□ -1.9
AP1S3Q96PC3 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.2□□□□□ -1.9
AP1S3Q96PC3 AL136964.1-201ENST00000622038 2990 ntBASIC3.2□□□□□ -1.9
AP1S3Q96PC3 RNA5SP113-201ENST00000410486 84 ntBASIC3.2□□□□□ -1.9
AP1S3Q96PC3 RN7SKP273-201ENST00000411392 314 ntBASIC3.2□□□□□ -1.9
AP1S3Q96PC3 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.2□□□□□ -1.9
AP1S3Q96PC3 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.2□□□□□ -1.9
AP1S3Q96PC3 COX6B1P1-201ENST00000415962 213 ntBASIC3.2□□□□□ -1.9
AP1S3Q96PC3 VN1R31P-201ENST00000417498 730 ntBASIC3.2□□□□□ -1.9
AP1S3Q96PC3 CHEK2P5-201ENST00000423877 246 ntBASIC3.2□□□□□ -1.9
AP1S3Q96PC3 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC3.2□□□□□ -1.9
AP1S3Q96PC3 RBMY2QP-201ENST00000429799 1147 ntBASIC3.2□□□□□ -1.9
AP1S3Q96PC3 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC3.2□□□□□ -1.9
AP1S3Q96PC3 AL049745.1-201ENST00000433953 286 ntBASIC3.2□□□□□ -1.9
AP1S3Q96PC3 AL132765.1-201ENST00000434165 553 ntBASIC3.2□□□□□ -1.9
AP1S3Q96PC3 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC3.2□□□□□ -1.9
AP1S3Q96PC3 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
AP1S3Q96PC3 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.2□□□□□ -1.9
AP1S3Q96PC3 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC3.2□□□□□ -1.9
AP1S3Q96PC3 SNRPGP5-201ENST00000456003 220 ntBASIC3.2□□□□□ -1.9
AP1S3Q96PC3 AC079804.1-201ENST00000461922 436 ntBASIC3.2□□□□□ -1.9
AP1S3Q96PC3 AC087385.1-201ENST00000475062 312 ntBASIC3.2□□□□□ -1.9
AP1S3Q96PC3 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC3.2□□□□□ -1.9
AP1S3Q96PC3 AC109458.1-201ENST00000508858 316 ntBASIC3.2□□□□□ -1.9
AP1S3Q96PC3 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.2□□□□□ -1.9
AP1S3Q96PC3 RN7SKP276-201ENST00000516242 268 ntBASIC3.2□□□□□ -1.9
AP1S3Q96PC3 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.2□□□□□ -1.9
AP1S3Q96PC3 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
AP1S3Q96PC3 AC021006.3-201ENST00000530771 192 ntBASIC3.2□□□□□ -1.9
AP1S3Q96PC3 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC3.2□□□□□ -1.9
AP1S3Q96PC3 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC3.2□□□□□ -1.9
AP1S3Q96PC3 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.2□□□□□ -1.9
AP1S3Q96PC3 MEG8-217ENST00000556637 924 ntTSL 5 BASIC3.2□□□□□ -1.9
AP1S3Q96PC3 AC079171.1-201ENST00000568788 914 ntBASIC3.2□□□□□ -1.9
AP1S3Q96PC3 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.2□□□□□ -1.9
AP1S3Q96PC3 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC3.2□□□□□ -1.9
AP1S3Q96PC3 AC005034.4-201ENST00000603612 899 ntBASIC3.2□□□□□ -1.9
AP1S3Q96PC3 MIR432-201ENST00000606207 94 ntBASIC3.2□□□□□ -1.9
AP1S3Q96PC3 MIR6768-201ENST00000610734 72 ntBASIC3.2□□□□□ -1.9
AP1S3Q96PC3 AL713922.2-201ENST00000619384 716 ntBASIC3.2□□□□□ -1.9
AP1S3Q96PC3 U7.8-201ENST00000619968 63 ntBASIC3.2□□□□□ -1.9
AP1S3Q96PC3 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
AP1S3Q96PC3 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
AP1S3Q96PC3 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
AP1S3Q96PC3 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC3.2□□□□□ -1.9
AP1S3Q96PC3 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
AP1S3Q96PC3 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.2□□□□□ -1.9
AP1S3Q96PC3 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC3.2□□□□□ -1.9
AP1S3Q96PC3 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
AP1S3Q96PC3 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
AP1S3Q96PC3 AC092162.3-201ENST00000624511 1624 ntBASIC3.19□□□□□ -1.9
AP1S3Q96PC3 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.19□□□□□ -1.9
AP1S3Q96PC3 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.19□□□□□ -1.9
AP1S3Q96PC3 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
AP1S3Q96PC3 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
AP1S3Q96PC3 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
AP1S3Q96PC3 MIR765-201ENST00000390226 114 ntBASIC3.19□□□□□ -1.9
AP1S3Q96PC3 RN7SKP100-201ENST00000411258 284 ntBASIC3.19□□□□□ -1.9
AP1S3Q96PC3 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC3.19□□□□□ -1.9
AP1S3Q96PC3 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.19□□□□□ -1.9
AP1S3Q96PC3 SLC9B1P4-201ENST00000421957 1288 ntBASIC3.19□□□□□ -1.9
AP1S3Q96PC3 AC017083.1-201ENST00000428093 483 ntBASIC3.19□□□□□ -1.9
AP1S3Q96PC3 RPL12P28-201ENST00000430852 489 ntBASIC3.19□□□□□ -1.9
AP1S3Q96PC3 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC3.19□□□□□ -1.9
AP1S3Q96PC3 AC092013.1-201ENST00000438795 332 ntBASIC3.19□□□□□ -1.9
AP1S3Q96PC3 RPL23AP93-201ENST00000440847 484 ntBASIC3.19□□□□□ -1.9
AP1S3Q96PC3 AC144530.1-201ENST00000452862 555 ntBASIC3.19□□□□□ -1.9
AP1S3Q96PC3 RPL5P32-201ENST00000454085 879 ntBASIC3.19□□□□□ -1.9
AP1S3Q96PC3 RPL7L1P8-201ENST00000469911 741 ntBASIC3.19□□□□□ -1.9
AP1S3Q96PC3 RN7SL585P-201ENST00000470538 280 ntBASIC3.19□□□□□ -1.9
AP1S3Q96PC3 AC007537.2-201ENST00000472093 511 ntBASIC3.19□□□□□ -1.9
AP1S3Q96PC3 RPSAP50-201ENST00000481955 852 ntBASIC3.19□□□□□ -1.9
AP1S3Q96PC3 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC3.19□□□□□ -1.9
AP1S3Q96PC3 AC106872.4-201ENST00000510050 523 ntBASIC3.19□□□□□ -1.9
AP1S3Q96PC3 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.19□□□□□ -1.9
AP1S3Q96PC3 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.19□□□□□ -1.9
AP1S3Q96PC3 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC3.19□□□□□ -1.9
AP1S3Q96PC3 OR8X1P-201ENST00000534542 869 ntBASIC3.19□□□□□ -1.9
AP1S3Q96PC3 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC3.19□□□□□ -1.9
AP1S3Q96PC3 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC3.19□□□□□ -1.9
AP1S3Q96PC3 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC3.19□□□□□ -1.9
AP1S3Q96PC3 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC3.19□□□□□ -1.9
AP1S3Q96PC3 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC3.19□□□□□ -1.9
AP1S3Q96PC3 MIR1269B-201ENST00000580405 75 ntBASIC3.19□□□□□ -1.9
AP1S3Q96PC3 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.19□□□□□ -1.9
AP1S3Q96PC3 AC009318.3-201ENST00000616916 503 ntBASIC3.19□□□□□ -1.9
AP1S3Q96PC3 MIR6853-201ENST00000619642 74 ntBASIC3.19□□□□□ -1.9
AP1S3Q96PC3 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC3.19□□□□□ -1.9
AP1S3Q96PC3 PWAR6-201ENST00000552334 4618 ntBASIC3.19□□□□□ -1.9
AP1S3Q96PC3 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
AP1S3Q96PC3 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
AP1S3Q96PC3 AC090229.1-201ENST00000590983 1609 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms