Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 AL138721.1-201ENST00000616756 179 ntBASIC1.31□□□□□ -2.2
SYNE1Q8NF91 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 AC005005.4-201ENST00000623789 16698 ntBASIC1.31□□□□□ -2.2
SYNE1Q8NF91 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 Z98745.1-201ENST00000402553 494 ntBASIC1.31□□□□□ -2.2
SYNE1Q8NF91 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 RPS27AP1-201ENST00000475545 471 ntBASIC1.31□□□□□ -2.2
SYNE1Q8NF91 AL132838.2-201ENST00000492041 314 ntBASIC1.31□□□□□ -2.2
SYNE1Q8NF91 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 AC005520.3-201ENST00000602874 370 ntBASIC1.31□□□□□ -2.2
SYNE1Q8NF91 AL121772.2-201ENST00000614331 297 ntBASIC1.31□□□□□ -2.2
SYNE1Q8NF91 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 AC135352.1-201ENST00000506173 1418 ntBASIC1.31□□□□□ -2.2
SYNE1Q8NF91 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC1.31□□□□□ -2.2
SYNE1Q8NF91 MAPK10-303ENST00000641324 3959 ntBASIC1.3□□□□□ -2.2
SYNE1Q8NF91 OR6C64P-201ENST00000419708 825 ntBASIC1.3□□□□□ -2.2
SYNE1Q8NF91 CYCSP32-201ENST00000440548 321 ntBASIC1.3□□□□□ -2.2
SYNE1Q8NF91 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC1.3□□□□□ -2.2
SYNE1Q8NF91 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC1.3□□□□□ -2.2
SYNE1Q8NF91 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
SYNE1Q8NF91 uc_338.13-201ENST00000618243 179 ntBASIC1.3□□□□□ -2.2
SYNE1Q8NF91 AC079684.1-201ENST00000621405 437 ntBASIC1.3□□□□□ -2.2
SYNE1Q8NF91 AC015871.5-202ENST00000623252 701 ntBASIC1.3□□□□□ -2.2
SYNE1Q8NF91 OR6C71P-202ENST00000641886 1107 ntBASIC1.3□□□□□ -2.2
SYNE1Q8NF91 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
SYNE1Q8NF91 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
SYNE1Q8NF91 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC1.3□□□□□ -2.2
SYNE1Q8NF91 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
SYNE1Q8NF91 ACEA_U3.1-201ENST00000363057 217 ntBASIC1.3□□□□□ -2.2
SYNE1Q8NF91 MIR7-3-201ENST00000384898 110 ntBASIC1.3□□□□□ -2.2
SYNE1Q8NF91 AL031584.1-201ENST00000447169 754 ntBASIC1.3□□□□□ -2.2
SYNE1Q8NF91 ATP1B1P1-201ENST00000509767 915 ntBASIC1.3□□□□□ -2.2
SYNE1Q8NF91 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
SYNE1Q8NF91 VN1R92P-201ENST00000598511 928 ntBASIC1.3□□□□□ -2.2
SYNE1Q8NF91 IPO5P1-202ENST00000600039 287 ntBASIC1.3□□□□□ -2.2
SYNE1Q8NF91 OR7A19P-201ENST00000608051 733 ntBASIC1.3□□□□□ -2.2
SYNE1Q8NF91 AC096577.2-201ENST00000611455 153 ntBASIC1.3□□□□□ -2.2
SYNE1Q8NF91 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC1.3□□□□□ -2.2
SYNE1Q8NF91 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
SYNE1Q8NF91 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
SYNE1Q8NF91 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC1.3□□□□□ -2.2
SYNE1Q8NF91 AL034370.1-201ENST00000397254 1590 ntBASIC1.3□□□□□ -2.2
SYNE1Q8NF91 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
SYNE1Q8NF91 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
SYNE1Q8NF91 AL358178.1-201ENST00000407698 397 ntBASIC1.3□□□□□ -2.2
SYNE1Q8NF91 RPS3AP12-201ENST00000443616 753 ntBASIC1.3□□□□□ -2.2
SYNE1Q8NF91 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC1.3□□□□□ -2.2
SYNE1Q8NF91 RPL35AP15-201ENST00000468042 339 ntBASIC1.3□□□□□ -2.2
SYNE1Q8NF91 NPM1P29-201ENST00000483112 803 ntBASIC1.3□□□□□ -2.2
SYNE1Q8NF91 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC1.3□□□□□ -2.2
SYNE1Q8NF91 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC1.3□□□□□ -2.2
SYNE1Q8NF91 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC1.3□□□□□ -2.2
SYNE1Q8NF91 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC1.3□□□□□ -2.2
SYNE1Q8NF91 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC1.3□□□□□ -2.2
SYNE1Q8NF91 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC1.3□□□□□ -2.2
SYNE1Q8NF91 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
SYNE1Q8NF91 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
SYNE1Q8NF91 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC1.3□□□□□ -2.2
SYNE1Q8NF91 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
SYNE1Q8NF91 AL035246.1-201ENST00000433554 1255 ntBASIC1.3□□□□□ -2.2
SYNE1Q8NF91 AC007688.1-201ENST00000475592 759 ntBASIC1.3□□□□□ -2.2
SYNE1Q8NF91 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC1.3□□□□□ -2.2
SYNE1Q8NF91 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC1.3□□□□□ -2.2
SYNE1Q8NF91 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC1.3□□□□□ -2.2
SYNE1Q8NF91 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC1.3□□□□□ -2.2
SYNE1Q8NF91 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC1.3□□□□□ -2.2
SYNE1Q8NF91 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
SYNE1Q8NF91 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
SYNE1Q8NF91 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
SYNE1Q8NF91 RPS24P12-201ENST00000402084 394 ntBASIC1.3□□□□□ -2.2
SYNE1Q8NF91 RPEP2-201ENST00000432149 701 ntBASIC1.3□□□□□ -2.2
SYNE1Q8NF91 AC090686.1-201ENST00000481577 749 ntBASIC1.3□□□□□ -2.2
SYNE1Q8NF91 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
SYNE1Q8NF91 OOSP1P2-201ENST00000579644 351 ntBASIC1.3□□□□□ -2.2
SYNE1Q8NF91 AL592436.1-201ENST00000605135 558 ntBASIC1.3□□□□□ -2.2
SYNE1Q8NF91 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC1.3□□□□□ -2.2
SYNE1Q8NF91 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
SYNE1Q8NF91 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
SYNE1Q8NF91 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC1.3□□□□□ -2.2
SYNE1Q8NF91 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC1.3□□□□□ -2.2
SYNE1Q8NF91 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC1.3□□□□□ -2.2
SYNE1Q8NF91 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC1.3□□□□□ -2.2
SYNE1Q8NF91 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC1.3□□□□□ -2.2
SYNE1Q8NF91 AC039056.2-201ENST00000622261 511 ntBASIC1.3□□□□□ -2.2
SYNE1Q8NF91 LINC01808-202ENST00000641680 1116 ntBASIC1.3□□□□□ -2.2
SYNE1Q8NF91 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC1.3□□□□□ -2.2
SYNE1Q8NF91 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
SYNE1Q8NF91 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
SYNE1Q8NF91 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC1.3□□□□□ -2.2
SYNE1Q8NF91 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
SYNE1Q8NF91 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC1.3□□□□□ -2.2
SYNE1Q8NF91 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms