Protein–RNA interactions for Protein: Q8N9I9

DTX3, Probable E3 ubiquitin-protein ligase DTX3, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX3Q8N9I9 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
DTX3Q8N9I9 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.38□□□□□ -1.55
DTX3Q8N9I9 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
DTX3Q8N9I9 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
DTX3Q8N9I9 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
DTX3Q8N9I9 CUBN-201ENST00000377823 705 ntTSL 3 BASIC5.38□□□□□ -1.55
DTX3Q8N9I9 Y_RNA.450-201ENST00000384198 113 ntBASIC5.38□□□□□ -1.55
DTX3Q8N9I9 RN7SKP17-201ENST00000411242 351 ntBASIC5.38□□□□□ -1.55
DTX3Q8N9I9 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.38□□□□□ -1.55
DTX3Q8N9I9 AL136133.1-201ENST00000413694 376 ntBASIC5.38□□□□□ -1.55
DTX3Q8N9I9 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC5.38□□□□□ -1.55
DTX3Q8N9I9 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.38□□□□□ -1.55
DTX3Q8N9I9 TMBIM7P-201ENST00000418074 855 ntBASIC5.38□□□□□ -1.55
DTX3Q8N9I9 AL121878.1-201ENST00000418638 859 ntBASIC5.38□□□□□ -1.55
DTX3Q8N9I9 MTCYBP24-201ENST00000420387 1106 ntBASIC5.38□□□□□ -1.55
DTX3Q8N9I9 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.38□□□□□ -1.55
DTX3Q8N9I9 PRUNEP1-201ENST00000425846 705 ntBASIC5.38□□□□□ -1.55
DTX3Q8N9I9 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.38□□□□□ -1.55
DTX3Q8N9I9 USP12PX-201ENST00000432383 1057 ntBASIC5.38□□□□□ -1.55
DTX3Q8N9I9 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.38□□□□□ -1.55
DTX3Q8N9I9 AL731534.1-201ENST00000434711 269 ntBASIC5.38□□□□□ -1.55
DTX3Q8N9I9 MTND4LP10-201ENST00000435146 291 ntBASIC5.38□□□□□ -1.55
DTX3Q8N9I9 AC245291.3-201ENST00000443400 292 ntBASIC5.38□□□□□ -1.55
DTX3Q8N9I9 BMS1P10-201ENST00000443754 1120 ntBASIC5.38□□□□□ -1.55
DTX3Q8N9I9 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
DTX3Q8N9I9 snoU109.1-201ENST00000459339 135 ntBASIC5.38□□□□□ -1.55
DTX3Q8N9I9 RN7SL836P-201ENST00000476140 296 ntBASIC5.38□□□□□ -1.55
DTX3Q8N9I9 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
DTX3Q8N9I9 DUTP7-201ENST00000507982 486 ntBASIC5.38□□□□□ -1.55
DTX3Q8N9I9 AF131216.2-201ENST00000512316 564 ntBASIC5.38□□□□□ -1.55
DTX3Q8N9I9 AC010342.1-201ENST00000514047 877 ntBASIC5.38□□□□□ -1.55
DTX3Q8N9I9 AC138517.1-201ENST00000515724 568 ntBASIC5.38□□□□□ -1.55
DTX3Q8N9I9 SCARNA5-201ENST00000516201 276 ntBASIC5.38□□□□□ -1.55
DTX3Q8N9I9 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
DTX3Q8N9I9 COX6B1P4-201ENST00000519826 484 ntBASIC5.38□□□□□ -1.55
DTX3Q8N9I9 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
DTX3Q8N9I9 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC5.38□□□□□ -1.55
DTX3Q8N9I9 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC5.38□□□□□ -1.55
DTX3Q8N9I9 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC5.38□□□□□ -1.55
DTX3Q8N9I9 AC093519.1-201ENST00000566109 298 ntBASIC5.38□□□□□ -1.55
DTX3Q8N9I9 MT1CP-201ENST00000567054 174 ntBASIC5.38□□□□□ -1.55
DTX3Q8N9I9 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.38□□□□□ -1.55
DTX3Q8N9I9 MIR3913-1-201ENST00000577744 102 ntBASIC5.38□□□□□ -1.55
DTX3Q8N9I9 MIR4732-201ENST00000581873 76 ntBASIC5.38□□□□□ -1.55
DTX3Q8N9I9 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC5.38□□□□□ -1.55
DTX3Q8N9I9 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.38□□□□□ -1.55
DTX3Q8N9I9 AC020916.2-201ENST00000591242 360 ntBASIC5.38□□□□□ -1.55
DTX3Q8N9I9 BNIP3P8-201ENST00000597863 560 ntBASIC5.38□□□□□ -1.55
DTX3Q8N9I9 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC5.38□□□□□ -1.55
DTX3Q8N9I9 AP000907.4-201ENST00000604143 237 ntBASIC5.38□□□□□ -1.55
DTX3Q8N9I9 AC091488.1-201ENST00000604239 660 ntBASIC5.38□□□□□ -1.55
DTX3Q8N9I9 AC115286.1-201ENST00000604298 434 ntBASIC5.38□□□□□ -1.55
DTX3Q8N9I9 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.38□□□□□ -1.55
DTX3Q8N9I9 MIR7109-201ENST00000613748 65 ntBASIC5.38□□□□□ -1.55
DTX3Q8N9I9 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
DTX3Q8N9I9 DUXAP9-208ENST00000622815 614 ntBASIC5.38□□□□□ -1.55
DTX3Q8N9I9 AC021106.3-201ENST00000623925 531 ntBASIC5.38□□□□□ -1.55
DTX3Q8N9I9 FAM157B-203ENST00000639350 358 ntBASIC5.38□□□□□ -1.55
DTX3Q8N9I9 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
DTX3Q8N9I9 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
DTX3Q8N9I9 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
DTX3Q8N9I9 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
DTX3Q8N9I9 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
DTX3Q8N9I9 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
DTX3Q8N9I9 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
DTX3Q8N9I9 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
DTX3Q8N9I9 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
DTX3Q8N9I9 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
DTX3Q8N9I9 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC5.38□□□□□ -1.55
DTX3Q8N9I9 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
DTX3Q8N9I9 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
DTX3Q8N9I9 MTCO1P14-201ENST00000441695 1559 ntBASIC5.38□□□□□ -1.55
DTX3Q8N9I9 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
DTX3Q8N9I9 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
DTX3Q8N9I9 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
DTX3Q8N9I9 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
DTX3Q8N9I9 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC5.37□□□□□ -1.55
DTX3Q8N9I9 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
DTX3Q8N9I9 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
DTX3Q8N9I9 RNU6-462P-201ENST00000362659 105 ntBASIC5.37□□□□□ -1.55
DTX3Q8N9I9 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
DTX3Q8N9I9 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.37□□□□□ -1.55
DTX3Q8N9I9 U3.52-201ENST00000384034 216 ntBASIC5.37□□□□□ -1.55
DTX3Q8N9I9 Y_RNA.453-201ENST00000384223 109 ntBASIC5.37□□□□□ -1.55
DTX3Q8N9I9 FCF1P10-201ENST00000407590 479 ntBASIC5.37□□□□□ -1.55
DTX3Q8N9I9 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
DTX3Q8N9I9 AC083875.1-201ENST00000419509 405 ntBASIC5.37□□□□□ -1.55
DTX3Q8N9I9 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
DTX3Q8N9I9 MTCO3P1-205ENST00000422088 832 ntBASIC5.37□□□□□ -1.55
DTX3Q8N9I9 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.37□□□□□ -1.55
DTX3Q8N9I9 AL157884.1-201ENST00000424561 454 ntBASIC5.37□□□□□ -1.55
DTX3Q8N9I9 AC073335.1-201ENST00000427776 363 ntBASIC5.37□□□□□ -1.55
DTX3Q8N9I9 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.37□□□□□ -1.55
DTX3Q8N9I9 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.37□□□□□ -1.55
DTX3Q8N9I9 AC092427.1-201ENST00000439177 601 ntBASIC5.37□□□□□ -1.55
DTX3Q8N9I9 RPS27AP15-201ENST00000447672 466 ntBASIC5.37□□□□□ -1.55
DTX3Q8N9I9 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
DTX3Q8N9I9 RPL26P28-201ENST00000451325 435 ntBASIC5.37□□□□□ -1.55
DTX3Q8N9I9 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC5.37□□□□□ -1.55
DTX3Q8N9I9 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms