Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.62□□□□□ -1.67
CLIP4Q8N3C7 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.62□□□□□ -1.67
CLIP4Q8N3C7 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.62□□□□□ -1.67
CLIP4Q8N3C7 AC012146.2-201ENST00000576545 416 ntBASIC4.62□□□□□ -1.67
CLIP4Q8N3C7 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.62□□□□□ -1.67
CLIP4Q8N3C7 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.62□□□□□ -1.67
CLIP4Q8N3C7 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.62□□□□□ -1.67
CLIP4Q8N3C7 AC018618.2-201ENST00000604770 446 ntBASIC4.62□□□□□ -1.67
CLIP4Q8N3C7 AC126915.2-201ENST00000610957 190 ntBASIC4.62□□□□□ -1.67
CLIP4Q8N3C7 AC139792.2-201ENST00000624218 587 ntBASIC4.62□□□□□ -1.67
CLIP4Q8N3C7 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC4.62□□□□□ -1.67
CLIP4Q8N3C7 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.62□□□□□ -1.67
CLIP4Q8N3C7 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
CLIP4Q8N3C7 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
CLIP4Q8N3C7 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CLIP4Q8N3C7 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CLIP4Q8N3C7 AL133268.1-201ENST00000405676 1401 ntBASIC4.62□□□□□ -1.67
CLIP4Q8N3C7 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
CLIP4Q8N3C7 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CLIP4Q8N3C7 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 AL121950.1-201ENST00000624993 2077 ntBASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 TTC39DP-201ENST00000416781 1688 ntBASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 ANKRD36P1-201ENST00000344424 659 ntBASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 AC104297.1-201ENST00000393779 870 ntBASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 MTND2P18-201ENST00000419962 1030 ntBASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 FO393419.3-201ENST00000428741 282 ntBASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 UBE2V1P1-201ENST00000430836 445 ntBASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 EEF1A1P39-201ENST00000440791 250 ntBASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 KATNBL1P3-201ENST00000443475 909 ntBASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 TCEA1P1-201ENST00000449716 880 ntBASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 IGHV5-78-201ENST00000450948 295 ntBASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 AL606490.1-201ENST00000452266 765 ntBASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 AL445433.1-201ENST00000457507 257 ntBASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 RPL7AP28-201ENST00000464513 571 ntBASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 RN7SL799P-201ENST00000475891 298 ntBASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 AC011037.1-201ENST00000483964 558 ntBASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 AC004815.1-201ENST00000484185 331 ntBASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 AC072052.1-201ENST00000496556 306 ntBASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 AC023050.1-201ENST00000498198 304 ntBASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 AC021146.3-201ENST00000511911 260 ntBASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 SNORA3.4-201ENST00000515969 96 ntBASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 HIGD1AP18-201ENST00000520730 278 ntBASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 OR4A2P-201ENST00000527276 913 ntBASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 AC006518.2-201ENST00000542513 940 ntBASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 AC069366.1-201ENST00000583159 838 ntBASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 AL353778.1-201ENST00000603149 408 ntBASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 RNF138P2-201ENST00000603490 592 ntBASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 AC105254.2-201ENST00000603636 436 ntBASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 AL121890.3-201ENST00000618494 516 ntBASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 AL121895.2-201ENST00000619558 447 ntBASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 AC021106.3-201ENST00000623925 531 ntBASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 AL512506.2-201ENST00000624472 458 ntBASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 AC017007.4-201ENST00000503353 1352 ntBASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 MTCO1P18-201ENST00000455518 1419 ntBASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CLIP4Q8N3C7 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms