Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC3.04□□□□□ -1.92
SCXQ7RTU7 RN7SL802P-201ENST00000577858 299 ntBASIC3.04□□□□□ -1.92
SCXQ7RTU7 SNORA74C-1-201ENST00000580726 201 ntBASIC3.04□□□□□ -1.92
SCXQ7RTU7 AC009303.3-201ENST00000591103 736 ntBASIC3.04□□□□□ -1.92
SCXQ7RTU7 AL121932.1-201ENST00000605542 214 ntBASIC3.04□□□□□ -1.92
SCXQ7RTU7 AC243654.2-201ENST00000612843 443 ntBASIC3.04□□□□□ -1.92
SCXQ7RTU7 AC107905.1-201ENST00000616204 426 ntBASIC3.04□□□□□ -1.92
SCXQ7RTU7 AC005086.4-201ENST00000623065 213 ntBASIC3.04□□□□□ -1.92
SCXQ7RTU7 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.04□□□□□ -1.92
SCXQ7RTU7 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
SCXQ7RTU7 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
SCXQ7RTU7 AL442639.1-201ENST00000625030 1899 ntBASIC3.04□□□□□ -1.92
SCXQ7RTU7 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.04□□□□□ -1.92
SCXQ7RTU7 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
SCXQ7RTU7 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC3.04□□□□□ -1.92
SCXQ7RTU7 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SCXQ7RTU7 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SCXQ7RTU7 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC3.04□□□□□ -1.92
SCXQ7RTU7 AC017104.4-201ENST00000636283 1592 ntBASIC3.04□□□□□ -1.92
SCXQ7RTU7 AC068446.1-201ENST00000556425 1549 ntBASIC3.03□□□□□ -1.92
SCXQ7RTU7 KARSP3-201ENST00000571212 1504 ntBASIC3.03□□□□□ -1.92
SCXQ7RTU7 AC093311.1-201ENST00000506586 2021 ntBASIC3.03□□□□□ -1.92
SCXQ7RTU7 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SCXQ7RTU7 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SCXQ7RTU7 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.03□□□□□ -1.92
SCXQ7RTU7 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SCXQ7RTU7 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SCXQ7RTU7 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SCXQ7RTU7 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
SCXQ7RTU7 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
SCXQ7RTU7 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SCXQ7RTU7 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
SCXQ7RTU7 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
SCXQ7RTU7 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.03□□□□□ -1.92
SCXQ7RTU7 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SCXQ7RTU7 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC3.03□□□□□ -1.92
SCXQ7RTU7 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SCXQ7RTU7 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SCXQ7RTU7 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SCXQ7RTU7 AC126755.2-208ENST00000327792 462 ntBASIC3.03□□□□□ -1.92
SCXQ7RTU7 AC138969.1-213ENST00000331436 462 ntBASIC3.03□□□□□ -1.92
SCXQ7RTU7 IGKV7-3-201ENST00000357453 298 ntBASIC3.03□□□□□ -1.92
SCXQ7RTU7 RNU6-386P-201ENST00000362650 107 ntBASIC3.03□□□□□ -1.92
SCXQ7RTU7 RNU6-891P-201ENST00000384280 111 ntBASIC3.03□□□□□ -1.92
SCXQ7RTU7 MIR195-201ENST00000385194 87 ntBASIC3.03□□□□□ -1.92
SCXQ7RTU7 RNU1-82P-201ENST00000390851 165 ntBASIC3.03□□□□□ -1.92
SCXQ7RTU7 ST13P16-201ENST00000401760 781 ntBASIC3.03□□□□□ -1.92
SCXQ7RTU7 RNA5SP345-201ENST00000410646 108 ntBASIC3.03□□□□□ -1.92
SCXQ7RTU7 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC3.03□□□□□ -1.92
SCXQ7RTU7 RPL21P108-201ENST00000413857 481 ntBASIC3.03□□□□□ -1.92
SCXQ7RTU7 MTND4P11-201ENST00000417020 1058 ntBASIC3.03□□□□□ -1.92
SCXQ7RTU7 TMBIM7P-201ENST00000418074 855 ntBASIC3.03□□□□□ -1.92
SCXQ7RTU7 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.03□□□□□ -1.92
SCXQ7RTU7 BTF3P9-201ENST00000418784 283 ntBASIC3.03□□□□□ -1.92
SCXQ7RTU7 LINC00993-201ENST00000420453 540 ntBASIC3.03□□□□□ -1.92
SCXQ7RTU7 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC3.03□□□□□ -1.92
SCXQ7RTU7 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.03□□□□□ -1.92
SCXQ7RTU7 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SCXQ7RTU7 RPS17P8-201ENST00000434525 335 ntBASIC3.03□□□□□ -1.92
SCXQ7RTU7 CEACAMP1-201ENST00000434624 1035 ntBASIC3.03□□□□□ -1.92
SCXQ7RTU7 PPIAP13-201ENST00000434706 478 ntBASIC3.03□□□□□ -1.92
SCXQ7RTU7 ARL5AP3-201ENST00000439327 386 ntBASIC3.03□□□□□ -1.92
SCXQ7RTU7 ARL4AP3-201ENST00000441452 574 ntBASIC3.03□□□□□ -1.92
SCXQ7RTU7 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.03□□□□□ -1.92
SCXQ7RTU7 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.03□□□□□ -1.92
SCXQ7RTU7 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC3.03□□□□□ -1.92
SCXQ7RTU7 RN7SL517P-201ENST00000462240 305 ntBASIC3.03□□□□□ -1.92
SCXQ7RTU7 FTH1P2-201ENST00000466086 412 ntBASIC3.03□□□□□ -1.92
SCXQ7RTU7 AC018635.1-201ENST00000468292 1030 ntBASIC3.03□□□□□ -1.92
SCXQ7RTU7 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC3.03□□□□□ -1.92
SCXQ7RTU7 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC3.03□□□□□ -1.92
SCXQ7RTU7 AC073073.1-201ENST00000493920 463 ntBASIC3.03□□□□□ -1.92
SCXQ7RTU7 PPM1AP1-201ENST00000502740 1135 ntBASIC3.03□□□□□ -1.92
SCXQ7RTU7 AC091868.1-201ENST00000508746 304 ntBASIC3.03□□□□□ -1.92
SCXQ7RTU7 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC3.03□□□□□ -1.92
SCXQ7RTU7 AC034244.2-201ENST00000514668 858 ntBASIC3.03□□□□□ -1.92
SCXQ7RTU7 RNU1-6P-201ENST00000516290 144 ntBASIC3.03□□□□□ -1.92
SCXQ7RTU7 Y_RNA.719-201ENST00000517156 106 ntBASIC3.03□□□□□ -1.92
SCXQ7RTU7 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC3.03□□□□□ -1.92
SCXQ7RTU7 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.03□□□□□ -1.92
SCXQ7RTU7 HIGD1AP18-201ENST00000520730 278 ntBASIC3.03□□□□□ -1.92
SCXQ7RTU7 AC008676.3-201ENST00000521237 435 ntBASIC3.03□□□□□ -1.92
SCXQ7RTU7 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC3.03□□□□□ -1.92
SCXQ7RTU7 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.03□□□□□ -1.92
SCXQ7RTU7 AC008083.2-201ENST00000546707 476 ntBASIC3.03□□□□□ -1.92
SCXQ7RTU7 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.03□□□□□ -1.92
SCXQ7RTU7 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC3.03□□□□□ -1.92
SCXQ7RTU7 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SCXQ7RTU7 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC3.03□□□□□ -1.92
SCXQ7RTU7 MIR4715-201ENST00000584117 79 ntBASIC3.03□□□□□ -1.92
SCXQ7RTU7 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SCXQ7RTU7 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.03□□□□□ -1.92
SCXQ7RTU7 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.03□□□□□ -1.92
SCXQ7RTU7 AC083899.3-201ENST00000603413 594 ntBASIC3.03□□□□□ -1.92
SCXQ7RTU7 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.03□□□□□ -1.92
SCXQ7RTU7 AC009237.17-201ENST00000618111 748 ntBASIC3.03□□□□□ -1.92
SCXQ7RTU7 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC3.03□□□□□ -1.92
SCXQ7RTU7 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC3.03□□□□□ -1.92
SCXQ7RTU7 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.92
SCXQ7RTU7 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms