Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 AC009163.6-201ENST00000612367 342 ntBASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 OR8G7P-201ENST00000616658 848 ntBASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 AP002782.1-201ENST00000623107 614 ntBASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 AL353662.3-201ENST00000625131 237 ntBASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 UGP2-231ENST00000627474 264 ntTSL 5 BASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 CASC19-206ENST00000641028 1430 ntBASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 SALL4P2-201ENST00000423288 2910 ntBASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 AL034370.1-201ENST00000397254 1590 ntBASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 AL359643.1-201ENST00000404109 423 ntBASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 U3.35-201ENST00000408405 208 ntBASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 AL356968.2-201ENST00000412769 1257 ntBASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 RPS3AP37-201ENST00000419176 745 ntBASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 AC093162.1-201ENST00000419682 124 ntBASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 E2F6P2-201ENST00000420708 748 ntBASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 AL390023.1-201ENST00000428836 262 ntBASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 MYO5BP2-201ENST00000449815 1277 ntBASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 AL133217.1-201ENST00000450980 425 ntBASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 Z95152.1-201ENST00000453556 656 ntBASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 MTCO3P16-201ENST00000454456 754 ntBASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 RPSAP50-201ENST00000481955 852 ntBASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 AC020890.1-201ENST00000491837 504 ntBASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 AC073358.1-201ENST00000505671 684 ntBASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 MRPS33P3-201ENST00000513456 322 ntBASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 RN7SKP46-201ENST00000515942 234 ntBASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 LRRC6P1-201ENST00000532188 885 ntBASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 OR10G5P-201ENST00000532733 358 ntBASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 NDUFAF4P1-201ENST00000559425 519 ntBASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 AC093249.4-201ENST00000564755 259 ntBASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 SNORA74C-1-201ENST00000580726 201 ntBASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 RN7SL622P-201ENST00000585292 275 ntBASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 AC119751.7-201ENST00000600494 245 ntBASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 AL445222.1-201ENST00000607259 628 ntBASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 AC005021.1-201ENST00000608730 355 ntBASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 AL121612.2-201ENST00000612261 482 ntBASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 AC015922.4-201ENST00000612568 690 ntBASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 AC022106.2-201ENST00000620114 757 ntBASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 AC092111.2-201ENST00000611627 1414 ntBASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
ZNF549Q6P9A3 SMG1P6-201ENST00000532337 2930 ntBASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms