Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 NEAT1-202ENST00000501122 22743 ntBASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 HSPA8P17-201ENST00000427029 1382 ntBASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 AL121886.1-201ENST00000358609 435 ntBASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 RNU4-92P-201ENST00000363783 136 ntBASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 RNU1-136P-201ENST00000384181 164 ntBASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 AL078599.1-201ENST00000402075 293 ntBASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 AL008987.1-201ENST00000415528 237 ntBASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 MORF4L1P6-201ENST00000418771 268 ntBASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 HIGD1AP4-201ENST00000430194 280 ntBASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 AC009263.1-201ENST00000441193 1239 ntBASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 AC012512.1-201ENST00000446594 718 ntBASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 RPL7AP52-201ENST00000458096 790 ntBASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 AC097484.1-201ENST00000471148 389 ntBASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 AC004263.1-201ENST00000479327 332 ntBASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 RN7SL346P-201ENST00000491561 294 ntBASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 AL671862.1-201ENST00000515851 349 ntBASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 AC063949.1-201ENST00000552900 865 ntBASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 NIFKP8-201ENST00000560500 874 ntBASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 MIR4697-201ENST00000582977 78 ntBASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 AP000238.1-201ENST00000608759 426 ntBASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 uc_338.9-201ENST00000617424 182 ntBASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 AC079416.3-201ENST00000624479 549 ntBASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 AC017037.3-201ENST00000625016 472 ntBASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 SAMMSON-213ENST00000641336 1521 ntBASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 AC011755.1-201ENST00000623763 2049 ntBASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SLC44A4Q53GD3 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.53
SLC44A4Q53GD3 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
SLC44A4Q53GD3 AC073136.1-201ENST00000449426 2884 ntBASIC5.46□□□□□ -1.53
SLC44A4Q53GD3 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
SLC44A4Q53GD3 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
SLC44A4Q53GD3 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
SLC44A4Q53GD3 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SLC44A4Q53GD3 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SLC44A4Q53GD3 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
SLC44A4Q53GD3 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.46□□□□□ -1.54
SLC44A4Q53GD3 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
SLC44A4Q53GD3 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SLC44A4Q53GD3 RNU6-1339P-201ENST00000363574 91 ntBASIC5.46□□□□□ -1.54
SLC44A4Q53GD3 SNORD116.1-201ENST00000365628 92 ntBASIC5.46□□□□□ -1.54
SLC44A4Q53GD3 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
SLC44A4Q53GD3 SNORD116-8-201ENST00000384365 95 ntBASIC5.46□□□□□ -1.54
SLC44A4Q53GD3 MIR192-201ENST00000384915 110 ntBASIC5.46□□□□□ -1.54
SLC44A4Q53GD3 MIR525-201ENST00000384978 85 ntBASIC5.46□□□□□ -1.54
SLC44A4Q53GD3 SKINT1L-201ENST00000401057 817 ntBASIC5.46□□□□□ -1.54
SLC44A4Q53GD3 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC5.46□□□□□ -1.54
SLC44A4Q53GD3 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.46□□□□□ -1.54
SLC44A4Q53GD3 COX6B1P1-201ENST00000415962 213 ntBASIC5.46□□□□□ -1.54
SLC44A4Q53GD3 AC009518.2-201ENST00000418056 731 ntBASIC5.46□□□□□ -1.54
SLC44A4Q53GD3 HMGB1P49-201ENST00000418882 569 ntBASIC5.46□□□□□ -1.54
SLC44A4Q53GD3 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.46□□□□□ -1.54
SLC44A4Q53GD3 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms