Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HIST1H3AP68431 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
HIST1H3AP68431 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.74□□□□□ -1.81
HIST1H3AP68431 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
HIST1H3AP68431 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HIST1H3AP68431 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
HIST1H3AP68431 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.73□□□□□ -1.81
HIST1H3AP68431 AC025031.4-201ENST00000621248 3271 ntBASIC3.73□□□□□ -1.81
HIST1H3AP68431 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
HIST1H3AP68431 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HIST1H3AP68431 RNA5SP502-201ENST00000362694 119 ntBASIC3.73□□□□□ -1.81
HIST1H3AP68431 RPS4XP9-201ENST00000405151 780 ntBASIC3.73□□□□□ -1.81
HIST1H3AP68431 RAB9AP4-201ENST00000415230 609 ntBASIC3.73□□□□□ -1.81
HIST1H3AP68431 RPS29P17-201ENST00000430795 166 ntBASIC3.73□□□□□ -1.81
HIST1H3AP68431 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC3.73□□□□□ -1.81
HIST1H3AP68431 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC3.73□□□□□ -1.81
HIST1H3AP68431 SBDSP1-204ENST00000453858 737 ntBASIC3.73□□□□□ -1.81
HIST1H3AP68431 EIF4A2P2-201ENST00000455776 1070 ntBASIC3.73□□□□□ -1.81
HIST1H3AP68431 MTND2P28-201ENST00000457540 1044 ntBASIC3.73□□□□□ -1.81
HIST1H3AP68431 SEPT14P1-201ENST00000458703 648 ntBASIC3.73□□□□□ -1.81
HIST1H3AP68431 RN7SL691P-201ENST00000494487 301 ntBASIC3.73□□□□□ -1.81
HIST1H3AP68431 AC146944.2-203ENST00000502493 354 ntBASIC3.73□□□□□ -1.81
HIST1H3AP68431 AL592156.1-201ENST00000508758 304 ntBASIC3.73□□□□□ -1.81
HIST1H3AP68431 AC139495.1-202ENST00000513164 354 ntBASIC3.73□□□□□ -1.81
HIST1H3AP68431 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC3.73□□□□□ -1.81
HIST1H3AP68431 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.73□□□□□ -1.81
HIST1H3AP68431 IGLVIV-65-201ENST00000517313 360 ntBASIC3.73□□□□□ -1.81
HIST1H3AP68431 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC3.73□□□□□ -1.81
HIST1H3AP68431 AC109635.6-201ENST00000525487 1113 ntBASIC3.73□□□□□ -1.81
HIST1H3AP68431 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC3.73□□□□□ -1.81
HIST1H3AP68431 DEFB109D-201ENST00000529497 240 ntBASIC3.73□□□□□ -1.81
HIST1H3AP68431 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.73□□□□□ -1.81
HIST1H3AP68431 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HIST1H3AP68431 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.73□□□□□ -1.81
HIST1H3AP68431 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC3.73□□□□□ -1.81
HIST1H3AP68431 AL713998.2-201ENST00000604538 1198 ntBASIC3.73□□□□□ -1.81
HIST1H3AP68431 FAM27D1-201ENST00000612308 341 ntBASIC3.73□□□□□ -1.81
HIST1H3AP68431 MIR4727-201ENST00000622232 55 ntBASIC3.73□□□□□ -1.81
HIST1H3AP68431 AC008785.1-201ENST00000624475 456 ntBASIC3.73□□□□□ -1.81
HIST1H3AP68431 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC3.73□□□□□ -1.81
HIST1H3AP68431 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC3.73□□□□□ -1.81
HIST1H3AP68431 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.73□□□□□ -1.81
HIST1H3AP68431 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HIST1H3AP68431 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HIST1H3AP68431 A2MP1-204ENST00000566278 4130 ntBASIC3.73□□□□□ -1.81
HIST1H3AP68431 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
HIST1H3AP68431 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
HIST1H3AP68431 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
HIST1H3AP68431 SLC2A3P1-201ENST00000519666 1451 ntBASIC3.73□□□□□ -1.81
HIST1H3AP68431 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HIST1H3AP68431 AC114546.3-201ENST00000623582 1734 ntBASIC3.73□□□□□ -1.81
HIST1H3AP68431 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.72□□□□□ -1.81
HIST1H3AP68431 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HIST1H3AP68431 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HIST1H3AP68431 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HIST1H3AP68431 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.72□□□□□ -1.81
HIST1H3AP68431 AC009313.2-201ENST00000417893 1941 ntBASIC3.72□□□□□ -1.81
HIST1H3AP68431 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HIST1H3AP68431 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.72□□□□□ -1.81
HIST1H3AP68431 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HIST1H3AP68431 AC010132.2-201ENST00000295493 1043 ntBASIC3.72□□□□□ -1.81
HIST1H3AP68431 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
HIST1H3AP68431 RNA5SP447-201ENST00000363749 119 ntBASIC3.72□□□□□ -1.81
HIST1H3AP68431 RNU6-1279P-201ENST00000383917 103 ntBASIC3.72□□□□□ -1.81
HIST1H3AP68431 RNA5SP105-201ENST00000391123 113 ntBASIC3.72□□□□□ -1.81
HIST1H3AP68431 CCL7-202ENST00000394627 696 ntTSL 3 BASIC3.72□□□□□ -1.81
HIST1H3AP68431 AL607077.1-201ENST00000401718 499 ntBASIC3.72□□□□□ -1.81
HIST1H3AP68431 MIR1179-201ENST00000408703 91 ntBASIC3.72□□□□□ -1.81
HIST1H3AP68431 METTL5-204ENST00000409340 472 ntTSL 5 BASIC3.72□□□□□ -1.81
HIST1H3AP68431 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC3.72□□□□□ -1.81
HIST1H3AP68431 RN7SKP235-201ENST00000410662 305 ntBASIC3.72□□□□□ -1.81
HIST1H3AP68431 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC3.72□□□□□ -1.81
HIST1H3AP68431 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.72□□□□□ -1.81
HIST1H3AP68431 DPY19L1P2-201ENST00000426647 915 ntBASIC3.72□□□□□ -1.81
HIST1H3AP68431 CNOT7P1-201ENST00000429006 852 ntBASIC3.72□□□□□ -1.81
HIST1H3AP68431 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC3.72□□□□□ -1.81
HIST1H3AP68431 SERPINA7P1-201ENST00000443077 631 ntBASIC3.72□□□□□ -1.81
HIST1H3AP68431 TXNP2-201ENST00000443918 295 ntBASIC3.72□□□□□ -1.81
HIST1H3AP68431 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.72□□□□□ -1.81
HIST1H3AP68431 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC3.72□□□□□ -1.81
HIST1H3AP68431 RPS29P33-201ENST00000456717 146 ntBASIC3.72□□□□□ -1.81
HIST1H3AP68431 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC3.72□□□□□ -1.81
HIST1H3AP68431 RPL23AP24-201ENST00000458203 385 ntBASIC3.72□□□□□ -1.81
HIST1H3AP68431 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC3.72□□□□□ -1.81
HIST1H3AP68431 AC096741.1-201ENST00000472250 846 ntBASIC3.72□□□□□ -1.81
HIST1H3AP68431 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC3.72□□□□□ -1.81
HIST1H3AP68431 RPL35P6-201ENST00000490024 372 ntBASIC3.72□□□□□ -1.81
HIST1H3AP68431 AC093720.1-201ENST00000505681 714 ntBASIC3.72□□□□□ -1.81
HIST1H3AP68431 PARP4P3-201ENST00000510265 317 ntBASIC3.72□□□□□ -1.81
HIST1H3AP68431 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
HIST1H3AP68431 MTHFD2P4-201ENST00000515074 1025 ntBASIC3.72□□□□□ -1.81
HIST1H3AP68431 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.72□□□□□ -1.81
HIST1H3AP68431 IFITM8P-201ENST00000522529 394 ntBASIC3.72□□□□□ -1.81
HIST1H3AP68431 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.72□□□□□ -1.81
HIST1H3AP68431 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC3.72□□□□□ -1.81
HIST1H3AP68431 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HIST1H3AP68431 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
HIST1H3AP68431 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.72□□□□□ -1.81
HIST1H3AP68431 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.72□□□□□ -1.81
HIST1H3AP68431 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms