Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.14□□□□□ -1.91
CKS1BP61024 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.14□□□□□ -1.91
CKS1BP61024 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
CKS1BP61024 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CKS1BP61024 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CKS1BP61024 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CKS1BP61024 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CKS1BP61024 ZNF826P-207ENST00000622273 1910 ntBASIC3.13□□□□□ -1.91
CKS1BP61024 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CKS1BP61024 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CKS1BP61024 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
CKS1BP61024 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.13□□□□□ -1.91
CKS1BP61024 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
CKS1BP61024 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CKS1BP61024 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CKS1BP61024 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CKS1BP61024 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CKS1BP61024 RN7SKP160-201ENST00000363804 340 ntBASIC3.13□□□□□ -1.91
CKS1BP61024 RNA5SP428-201ENST00000365129 132 ntBASIC3.13□□□□□ -1.91
CKS1BP61024 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CKS1BP61024 HSPE1P26-201ENST00000405341 275 ntBASIC3.13□□□□□ -1.91
CKS1BP61024 MIR1286-201ENST00000408112 78 ntBASIC3.13□□□□□ -1.91
CKS1BP61024 RN7SKP106-201ENST00000410832 272 ntBASIC3.13□□□□□ -1.91
CKS1BP61024 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.13□□□□□ -1.91
CKS1BP61024 PRELID3BP11-201ENST00000414230 479 ntBASIC3.13□□□□□ -1.91
CKS1BP61024 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC3.13□□□□□ -1.91
CKS1BP61024 Z74021.1-201ENST00000423610 407 ntBASIC3.13□□□□□ -1.91
CKS1BP61024 AC009965.2-201ENST00000425328 970 ntBASIC3.13□□□□□ -1.91
CKS1BP61024 NPM1P24-201ENST00000428039 894 ntBASIC3.13□□□□□ -1.91
CKS1BP61024 FGF12-202ENST00000430714 603 ntTSL 2 BASIC3.13□□□□□ -1.91
CKS1BP61024 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC3.13□□□□□ -1.91
CKS1BP61024 AC083863.1-201ENST00000438811 231 ntBASIC3.13□□□□□ -1.91
CKS1BP61024 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC3.13□□□□□ -1.91
CKS1BP61024 TXNP1-201ENST00000441872 371 ntBASIC3.13□□□□□ -1.91
CKS1BP61024 RPL34P20-201ENST00000442771 351 ntBASIC3.13□□□□□ -1.91
CKS1BP61024 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC3.13□□□□□ -1.91
CKS1BP61024 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC3.13□□□□□ -1.91
CKS1BP61024 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC3.13□□□□□ -1.91
CKS1BP61024 AC069277.2-201ENST00000454211 432 ntBASIC3.13□□□□□ -1.91
CKS1BP61024 EIF4A2P4-201ENST00000458691 1196 ntBASIC3.13□□□□□ -1.91
CKS1BP61024 RN7SL172P-201ENST00000460535 303 ntBASIC3.13□□□□□ -1.91
CKS1BP61024 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.13□□□□□ -1.91
CKS1BP61024 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.13□□□□□ -1.91
CKS1BP61024 RN7SL30P-201ENST00000488416 306 ntBASIC3.13□□□□□ -1.91
CKS1BP61024 RPL5P23-201ENST00000496040 868 ntBASIC3.13□□□□□ -1.91
CKS1BP61024 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.13□□□□□ -1.91
CKS1BP61024 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC3.13□□□□□ -1.91
CKS1BP61024 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
CKS1BP61024 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC3.13□□□□□ -1.91
CKS1BP61024 AC022832.1-201ENST00000530718 645 ntBASIC3.13□□□□□ -1.91
CKS1BP61024 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC3.13□□□□□ -1.91
CKS1BP61024 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CKS1BP61024 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.13□□□□□ -1.91
CKS1BP61024 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC3.13□□□□□ -1.91
CKS1BP61024 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC3.13□□□□□ -1.91
CKS1BP61024 AC093249.4-201ENST00000564755 259 ntBASIC3.13□□□□□ -1.91
CKS1BP61024 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC3.13□□□□□ -1.91
CKS1BP61024 AC011477.5-201ENST00000586571 259 ntBASIC3.13□□□□□ -1.91
CKS1BP61024 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC3.13□□□□□ -1.91
CKS1BP61024 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC3.13□□□□□ -1.91
CKS1BP61024 SNX6P1-201ENST00000601728 1224 ntBASIC3.13□□□□□ -1.91
CKS1BP61024 AP003392.5-201ENST00000607857 415 ntBASIC3.13□□□□□ -1.91
CKS1BP61024 AC015982.1-201ENST00000608113 465 ntBASIC3.13□□□□□ -1.91
CKS1BP61024 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.13□□□□□ -1.91
CKS1BP61024 AL022401.1-201ENST00000619498 108 ntBASIC3.13□□□□□ -1.91
CKS1BP61024 LDHA-225ENST00000625635 141 ntTSL 5 BASIC3.13□□□□□ -1.91
CKS1BP61024 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.13□□□□□ -1.91
CKS1BP61024 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC3.13□□□□□ -1.91
CKS1BP61024 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CKS1BP61024 AL592494.2-201ENST00000425455 1548 ntBASIC3.13□□□□□ -1.91
CKS1BP61024 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
CKS1BP61024 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC3.13□□□□□ -1.91
CKS1BP61024 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CKS1BP61024 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CKS1BP61024 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.12□□□□□ -1.91
CKS1BP61024 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.12□□□□□ -1.91
CKS1BP61024 AL021368.2-201ENST00000606125 5352 ntBASIC3.12□□□□□ -1.91
CKS1BP61024 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.12□□□□□ -1.91
CKS1BP61024 AC010928.1-201ENST00000592477 1447 ntBASIC3.12□□□□□ -1.91
CKS1BP61024 MFSD8-236ENST00000641509 4050 ntBASIC3.12□□□□□ -1.91
CKS1BP61024 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CKS1BP61024 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CKS1BP61024 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CKS1BP61024 FAM3C2-201ENST00000312214 681 ntBASIC3.12□□□□□ -1.91
CKS1BP61024 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC3.12□□□□□ -1.91
CKS1BP61024 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
CKS1BP61024 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC3.12□□□□□ -1.91
CKS1BP61024 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CKS1BP61024 FCF1P5-201ENST00000406490 482 ntBASIC3.12□□□□□ -1.91
CKS1BP61024 AL591848.1-201ENST00000413092 322 ntBASIC3.12□□□□□ -1.91
CKS1BP61024 GTF2IP5-201ENST00000414608 731 ntBASIC3.12□□□□□ -1.91
CKS1BP61024 BMS1P13-201ENST00000417301 885 ntBASIC3.12□□□□□ -1.91
CKS1BP61024 AC114814.2-201ENST00000419195 485 ntBASIC3.12□□□□□ -1.91
CKS1BP61024 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC3.12□□□□□ -1.91
CKS1BP61024 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC3.12□□□□□ -1.91
CKS1BP61024 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.12□□□□□ -1.91
CKS1BP61024 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.12□□□□□ -1.91
CKS1BP61024 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC3.12□□□□□ -1.91
CKS1BP61024 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.12□□□□□ -1.91
CKS1BP61024 AURKAPS1-201ENST00000451805 1212 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms