Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC3.64□□□□□ -1.83
SPCS3P61009 U3.53-201ENST00000628922 216 ntBASIC3.64□□□□□ -1.83
SPCS3P61009 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.64□□□□□ -1.83
SPCS3P61009 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SPCS3P61009 AC125257.1-201ENST00000560400 2930 ntBASIC3.64□□□□□ -1.83
SPCS3P61009 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.64□□□□□ -1.83
SPCS3P61009 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.64□□□□□ -1.83
SPCS3P61009 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SPCS3P61009 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SPCS3P61009 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.63□□□□□ -1.83
SPCS3P61009 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC3.63□□□□□ -1.83
SPCS3P61009 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.63□□□□□ -1.83
SPCS3P61009 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SPCS3P61009 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC3.63□□□□□ -1.83
SPCS3P61009 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SPCS3P61009 RNA5SP307-201ENST00000362863 116 ntBASIC3.63□□□□□ -1.83
SPCS3P61009 SNORA71.2-201ENST00000364941 134 ntBASIC3.63□□□□□ -1.83
SPCS3P61009 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC3.63□□□□□ -1.83
SPCS3P61009 MIR124-3-201ENST00000384866 87 ntBASIC3.63□□□□□ -1.83
SPCS3P61009 MIR765-201ENST00000390226 114 ntBASIC3.63□□□□□ -1.83
SPCS3P61009 RN7SKP167-201ENST00000411047 285 ntBASIC3.63□□□□□ -1.83
SPCS3P61009 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC3.63□□□□□ -1.83
SPCS3P61009 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC3.63□□□□□ -1.83
SPCS3P61009 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SPCS3P61009 CDY14P-201ENST00000431260 1014 ntBASIC3.63□□□□□ -1.83
SPCS3P61009 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.63□□□□□ -1.83
SPCS3P61009 HLA-N-201ENST00000437516 135 ntBASIC3.63□□□□□ -1.83
SPCS3P61009 AC016831.4-201ENST00000438302 307 ntBASIC3.63□□□□□ -1.83
SPCS3P61009 GSTA7P-201ENST00000438425 448 ntBASIC3.63□□□□□ -1.83
SPCS3P61009 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.63□□□□□ -1.83
SPCS3P61009 CDY12P-201ENST00000440679 1015 ntBASIC3.63□□□□□ -1.83
SPCS3P61009 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.63□□□□□ -1.83
SPCS3P61009 CDY13P-201ENST00000445813 1015 ntBASIC3.63□□□□□ -1.83
SPCS3P61009 CDY23P-201ENST00000451661 1014 ntBASIC3.63□□□□□ -1.83
SPCS3P61009 RPL7AP52-201ENST00000458096 790 ntBASIC3.63□□□□□ -1.83
SPCS3P61009 AC011037.1-201ENST00000483964 558 ntBASIC3.63□□□□□ -1.83
SPCS3P61009 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
SPCS3P61009 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.63□□□□□ -1.83
SPCS3P61009 AC104164.2-201ENST00000496953 495 ntBASIC3.63□□□□□ -1.83
SPCS3P61009 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.63□□□□□ -1.83
SPCS3P61009 SNX5P1-201ENST00000505757 1041 ntBASIC3.63□□□□□ -1.83
SPCS3P61009 AC106872.4-201ENST00000510050 523 ntBASIC3.63□□□□□ -1.83
SPCS3P61009 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC3.63□□□□□ -1.83
SPCS3P61009 AL161713.1-201ENST00000555538 145 ntBASIC3.63□□□□□ -1.83
SPCS3P61009 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC3.63□□□□□ -1.83
SPCS3P61009 AC007687.1-201ENST00000602704 304 ntBASIC3.63□□□□□ -1.83
SPCS3P61009 AC115621.1-201ENST00000604653 858 ntBASIC3.63□□□□□ -1.83
SPCS3P61009 AL592436.1-201ENST00000605135 558 ntBASIC3.63□□□□□ -1.83
SPCS3P61009 MIR6768-201ENST00000610734 72 ntBASIC3.63□□□□□ -1.83
SPCS3P61009 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SPCS3P61009 AC092628.2-201ENST00000622492 339 ntBASIC3.63□□□□□ -1.83
SPCS3P61009 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC3.63□□□□□ -1.83
SPCS3P61009 TEX41-256ENST00000626411 368 ntTSL 5 BASIC3.63□□□□□ -1.83
SPCS3P61009 U6.98-201ENST00000637157 84 ntBASIC3.63□□□□□ -1.83
SPCS3P61009 MIR4302-201ENST00000638058 60 ntBASIC3.63□□□□□ -1.83
SPCS3P61009 ZNF137P-201ENST00000456718 1920 ntBASIC3.63□□□□□ -1.83
SPCS3P61009 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SPCS3P61009 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SPCS3P61009 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.63□□□□□ -1.83
SPCS3P61009 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC3.63□□□□□ -1.83
SPCS3P61009 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SPCS3P61009 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.63□□□□□ -1.83
SPCS3P61009 CASC19-284ENST00000642142 1868 ntBASIC3.62□□□□□ -1.83
SPCS3P61009 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
SPCS3P61009 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SPCS3P61009 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC3.62□□□□□ -1.83
SPCS3P61009 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
SPCS3P61009 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.62□□□□□ -1.83
SPCS3P61009 INTS6P1-201ENST00000504674 2530 ntBASIC3.62□□□□□ -1.83
SPCS3P61009 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SPCS3P61009 AC000367.1-201ENST00000452711 1766 ntBASIC3.62□□□□□ -1.83
SPCS3P61009 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
SPCS3P61009 RNA5SP167-201ENST00000365461 116 ntBASIC3.62□□□□□ -1.83
SPCS3P61009 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC3.62□□□□□ -1.83
SPCS3P61009 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC3.62□□□□□ -1.83
SPCS3P61009 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SPCS3P61009 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC3.62□□□□□ -1.83
SPCS3P61009 RNU6-171P-201ENST00000384354 107 ntBASIC3.62□□□□□ -1.83
SPCS3P61009 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
SPCS3P61009 RN7SKP206-201ENST00000410823 293 ntBASIC3.62□□□□□ -1.83
SPCS3P61009 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.62□□□□□ -1.83
SPCS3P61009 USP9YP31-201ENST00000431405 881 ntBASIC3.62□□□□□ -1.83
SPCS3P61009 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.62□□□□□ -1.83
SPCS3P61009 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SPCS3P61009 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC3.62□□□□□ -1.83
SPCS3P61009 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.62□□□□□ -1.83
SPCS3P61009 RNU6-1218P-201ENST00000458990 108 ntBASIC3.62□□□□□ -1.83
SPCS3P61009 snoU13.20-201ENST00000459180 104 ntBASIC3.62□□□□□ -1.83
SPCS3P61009 AP000873.1-201ENST00000463987 400 ntBASIC3.62□□□□□ -1.83
SPCS3P61009 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC3.62□□□□□ -1.83
SPCS3P61009 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC3.62□□□□□ -1.83
SPCS3P61009 BTF3P13-201ENST00000513224 490 ntBASIC3.62□□□□□ -1.83
SPCS3P61009 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.62□□□□□ -1.83
SPCS3P61009 RNA5SP92-201ENST00000516437 110 ntBASIC3.62□□□□□ -1.83
SPCS3P61009 Vault.1-201ENST00000516474 102 ntBASIC3.62□□□□□ -1.83
SPCS3P61009 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC3.62□□□□□ -1.83
SPCS3P61009 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC3.62□□□□□ -1.83
SPCS3P61009 OR5M7P-201ENST00000526140 972 ntBASIC3.62□□□□□ -1.83
SPCS3P61009 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC3.62□□□□□ -1.83
SPCS3P61009 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms