Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
HDAC4P56524 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HDAC4P56524 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.1□□□□□ -1.59
HDAC4P56524 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.1□□□□□ -1.59
HDAC4P56524 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HDAC4P56524 TLK1P1-201ENST00000456760 2440 ntBASIC5.09□□□□□ -1.59
HDAC4P56524 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.09□□□□□ -1.59
HDAC4P56524 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.09□□□□□ -1.59
HDAC4P56524 AC099654.2-201ENST00000433031 1980 ntBASIC5.09□□□□□ -1.59
HDAC4P56524 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
HDAC4P56524 CCT8P1-201ENST00000413611 1657 ntBASIC5.09□□□□□ -1.59
HDAC4P56524 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HDAC4P56524 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
HDAC4P56524 AC131971.1-201ENST00000332881 1482 ntBASIC5.09□□□□□ -1.59
HDAC4P56524 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HDAC4P56524 AP000756.2-201ENST00000624168 2567 ntBASIC5.09□□□□□ -1.59
HDAC4P56524 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.09□□□□□ -1.59
HDAC4P56524 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
HDAC4P56524 AC234772.1-201ENST00000377927 937 ntBASIC5.09□□□□□ -1.59
HDAC4P56524 RNU6-207P-201ENST00000384137 107 ntBASIC5.09□□□□□ -1.59
HDAC4P56524 RNU6-185P-201ENST00000384421 107 ntBASIC5.09□□□□□ -1.59
HDAC4P56524 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
HDAC4P56524 AC093719.1-202ENST00000392735 373 ntBASIC5.09□□□□□ -1.59
HDAC4P56524 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC5.09□□□□□ -1.59
HDAC4P56524 EIF4A1P1-201ENST00000420241 934 ntBASIC5.09□□□□□ -1.59
HDAC4P56524 USP12PY-201ENST00000427677 1064 ntBASIC5.09□□□□□ -1.59
HDAC4P56524 FO393419.3-201ENST00000428741 282 ntBASIC5.09□□□□□ -1.59
HDAC4P56524 AC092162.1-201ENST00000432828 434 ntBASIC5.09□□□□□ -1.59
HDAC4P56524 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.09□□□□□ -1.59
HDAC4P56524 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC5.09□□□□□ -1.59
HDAC4P56524 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.09□□□□□ -1.59
HDAC4P56524 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.09□□□□□ -1.59
HDAC4P56524 RPL34P26-201ENST00000445636 354 ntBASIC5.09□□□□□ -1.59
HDAC4P56524 AC092685.1-201ENST00000447960 1243 ntBASIC5.09□□□□□ -1.59
HDAC4P56524 snoU13.20-201ENST00000459180 104 ntBASIC5.09□□□□□ -1.59
HDAC4P56524 GYG1P1-201ENST00000460864 698 ntBASIC5.09□□□□□ -1.59
HDAC4P56524 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HDAC4P56524 AC104164.3-201ENST00000467363 1258 ntBASIC5.09□□□□□ -1.59
HDAC4P56524 UBE2V1P12-201ENST00000503954 474 ntBASIC5.09□□□□□ -1.59
HDAC4P56524 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HDAC4P56524 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HDAC4P56524 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.09□□□□□ -1.59
HDAC4P56524 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HDAC4P56524 AC107918.3-201ENST00000533272 382 ntBASIC5.09□□□□□ -1.59
HDAC4P56524 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.09□□□□□ -1.59
HDAC4P56524 AC008033.2-201ENST00000542626 177 ntBASIC5.09□□□□□ -1.59
HDAC4P56524 AP003717.3-201ENST00000544832 1180 ntBASIC5.09□□□□□ -1.59
HDAC4P56524 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.09□□□□□ -1.59
HDAC4P56524 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.09□□□□□ -1.59
HDAC4P56524 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.09□□□□□ -1.59
HDAC4P56524 AC011374.2-201ENST00000607135 526 ntBASIC5.09□□□□□ -1.59
HDAC4P56524 AC010424.2-201ENST00000607594 443 ntBASIC5.09□□□□□ -1.59
HDAC4P56524 AC124016.2-201ENST00000610058 665 ntBASIC5.09□□□□□ -1.59
HDAC4P56524 RNU6-1192P-201ENST00000612197 107 ntBASIC5.09□□□□□ -1.59
HDAC4P56524 RNU6-489P-201ENST00000618289 107 ntBASIC5.09□□□□□ -1.59
HDAC4P56524 AL512427.1-201ENST00000618593 349 ntBASIC5.09□□□□□ -1.59
HDAC4P56524 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC5.09□□□□□ -1.59
HDAC4P56524 AC013437.2-201ENST00000639587 677 ntBASIC5.09□□□□□ -1.59
HDAC4P56524 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HDAC4P56524 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HDAC4P56524 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HDAC4P56524 AC093535.2-201ENST00000624769 2326 ntBASIC5.09□□□□□ -1.59
HDAC4P56524 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
HDAC4P56524 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HDAC4P56524 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.09□□□□□ -1.59
HDAC4P56524 AL450326.2-201ENST00000421913 1962 ntBASIC5.09□□□□□ -1.6
HDAC4P56524 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.09□□□□□ -1.6
HDAC4P56524 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
HDAC4P56524 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
HDAC4P56524 AC126323.6-202ENST00000568092 3511 ntBASIC5.09□□□□□ -1.6
HDAC4P56524 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.09□□□□□ -1.6
HDAC4P56524 INTS6P1-201ENST00000504674 2530 ntBASIC5.08□□□□□ -1.6
HDAC4P56524 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HDAC4P56524 AC106754.1-201ENST00000562632 1513 ntBASIC5.08□□□□□ -1.6
HDAC4P56524 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HDAC4P56524 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
HDAC4P56524 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
HDAC4P56524 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HDAC4P56524 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
HDAC4P56524 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HDAC4P56524 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
HDAC4P56524 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.08□□□□□ -1.6
HDAC4P56524 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.08□□□□□ -1.6
HDAC4P56524 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
HDAC4P56524 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
HDAC4P56524 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HDAC4P56524 RNU6-452P-201ENST00000384406 107 ntBASIC5.08□□□□□ -1.6
HDAC4P56524 MIR142-201ENST00000384835 87 ntBASIC5.08□□□□□ -1.6
HDAC4P56524 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HDAC4P56524 AL109941.1-201ENST00000401925 229 ntBASIC5.08□□□□□ -1.6
HDAC4P56524 VN1R51P-201ENST00000411675 945 ntBASIC5.08□□□□□ -1.6
HDAC4P56524 MTCO2P8-201ENST00000412213 658 ntBASIC5.08□□□□□ -1.6
HDAC4P56524 TRGV6-201ENST00000417928 299 ntBASIC5.08□□□□□ -1.6
HDAC4P56524 TMBIM7P-201ENST00000418074 855 ntBASIC5.08□□□□□ -1.6
HDAC4P56524 AC106883.1-201ENST00000418805 562 ntBASIC5.08□□□□□ -1.6
HDAC4P56524 OR2AM1P-201ENST00000422137 422 ntBASIC5.08□□□□□ -1.6
HDAC4P56524 AC241520.1-201ENST00000422654 1099 ntBASIC5.08□□□□□ -1.6
HDAC4P56524 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC5.08□□□□□ -1.6
HDAC4P56524 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.08□□□□□ -1.6
HDAC4P56524 RPS7P2-201ENST00000435134 607 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 135.8 ms