Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AL672167.1-205ENST00000641112 3080 ntBASIC4.65□□□□□ -1.66
CDH12P55289 SALL4P2-201ENST00000423288 2910 ntBASIC4.65□□□□□ -1.66
CDH12P55289 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.65□□□□□ -1.66
CDH12P55289 AC100871.1-201ENST00000507871 1456 ntBASIC4.65□□□□□ -1.66
CDH12P55289 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.65□□□□□ -1.66
CDH12P55289 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.65□□□□□ -1.67
CDH12P55289 MIR323A-201ENST00000362199 86 ntBASIC4.65□□□□□ -1.67
CDH12P55289 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CDH12P55289 MIR143-201ENST00000385300 106 ntBASIC4.65□□□□□ -1.67
CDH12P55289 CASP3-203ENST00000393588 677 ntTSL 4 BASIC4.65□□□□□ -1.67
CDH12P55289 AC005522.1-201ENST00000395416 346 ntBASIC4.65□□□□□ -1.67
CDH12P55289 OR3A2-201ENST00000408891 1076 ntBASIC4.65□□□□□ -1.67
CDH12P55289 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.65□□□□□ -1.67
CDH12P55289 AC108075.1-201ENST00000424692 529 ntBASIC4.65□□□□□ -1.67
CDH12P55289 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.65□□□□□ -1.67
CDH12P55289 AC234064.1-201ENST00000436312 247 ntBASIC4.65□□□□□ -1.67
CDH12P55289 AC009263.1-201ENST00000441193 1239 ntBASIC4.65□□□□□ -1.67
CDH12P55289 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.65□□□□□ -1.67
CDH12P55289 AL691482.1-201ENST00000453255 87 ntBASIC4.65□□□□□ -1.67
CDH12P55289 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.65□□□□□ -1.67
CDH12P55289 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.65□□□□□ -1.67
CDH12P55289 RPL7P51-201ENST00000490532 749 ntBASIC4.65□□□□□ -1.67
CDH12P55289 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC4.65□□□□□ -1.67
CDH12P55289 AC010486.2-201ENST00000505572 483 ntBASIC4.65□□□□□ -1.67
CDH12P55289 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.65□□□□□ -1.67
CDH12P55289 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.65□□□□□ -1.67
CDH12P55289 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.65□□□□□ -1.67
CDH12P55289 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.65□□□□□ -1.67
CDH12P55289 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC4.65□□□□□ -1.67
CDH12P55289 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CDH12P55289 AP002373.2-201ENST00000541631 1060 ntBASIC4.65□□□□□ -1.67
CDH12P55289 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
CDH12P55289 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.65□□□□□ -1.67
CDH12P55289 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CDH12P55289 AC090695.1-201ENST00000561269 1222 ntBASIC4.65□□□□□ -1.67
CDH12P55289 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC4.65□□□□□ -1.67
CDH12P55289 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC4.65□□□□□ -1.67
CDH12P55289 AGGF1P6-201ENST00000569213 976 ntBASIC4.65□□□□□ -1.67
CDH12P55289 CYCSP40-201ENST00000575927 294 ntBASIC4.65□□□□□ -1.67
CDH12P55289 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.65□□□□□ -1.67
CDH12P55289 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.65□□□□□ -1.67
CDH12P55289 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
CDH12P55289 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC4.65□□□□□ -1.67
CDH12P55289 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.65□□□□□ -1.67
CDH12P55289 MIR8069-1-201ENST00000616627 86 ntBASIC4.65□□□□□ -1.67
CDH12P55289 MIR8069-2-201ENST00000621412 86 ntBASIC4.65□□□□□ -1.67
CDH12P55289 AC109454.4-201ENST00000623411 649 ntBASIC4.65□□□□□ -1.67
CDH12P55289 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.65□□□□□ -1.67
CDH12P55289 ZNF663P-202ENST00000641770 1131 ntBASIC4.65□□□□□ -1.67
CDH12P55289 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CDH12P55289 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CDH12P55289 AC000367.1-201ENST00000452711 1766 ntBASIC4.65□□□□□ -1.67
CDH12P55289 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CDH12P55289 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.65□□□□□ -1.67
CDH12P55289 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.65□□□□□ -1.67
CDH12P55289 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CDH12P55289 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
CDH12P55289 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.65□□□□□ -1.67
CDH12P55289 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
CDH12P55289 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.64□□□□□ -1.67
CDH12P55289 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CDH12P55289 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
CDH12P55289 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.64□□□□□ -1.67
CDH12P55289 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
CDH12P55289 AC104260.2-201ENST00000623551 3497 ntBASIC4.64□□□□□ -1.67
CDH12P55289 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDH12P55289 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CDH12P55289 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.64□□□□□ -1.67
CDH12P55289 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDH12P55289 IGKV7-3-201ENST00000357453 298 ntBASIC4.64□□□□□ -1.67
CDH12P55289 RNU6-1339P-201ENST00000363574 91 ntBASIC4.64□□□□□ -1.67
CDH12P55289 RNU6-83P-201ENST00000384568 112 ntBASIC4.64□□□□□ -1.67
CDH12P55289 AL359643.1-201ENST00000404109 423 ntBASIC4.64□□□□□ -1.67
CDH12P55289 AL590084.1-201ENST00000407885 387 ntBASIC4.64□□□□□ -1.67
CDH12P55289 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.64□□□□□ -1.67
CDH12P55289 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.64□□□□□ -1.67
CDH12P55289 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.64□□□□□ -1.67
CDH12P55289 TMBIM7P-201ENST00000418074 855 ntBASIC4.64□□□□□ -1.67
CDH12P55289 RPF2P1-201ENST00000424137 906 ntBASIC4.64□□□□□ -1.67
CDH12P55289 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CDH12P55289 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.64□□□□□ -1.67
CDH12P55289 AL121776.1-201ENST00000429337 372 ntBASIC4.64□□□□□ -1.67
CDH12P55289 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.64□□□□□ -1.67
CDH12P55289 CFL1P1-202ENST00000432948 411 ntBASIC4.64□□□□□ -1.67
CDH12P55289 FGF7P5-201ENST00000441829 291 ntBASIC4.64□□□□□ -1.67
CDH12P55289 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC4.64□□□□□ -1.67
CDH12P55289 MTND2P14-201ENST00000482139 351 ntBASIC4.64□□□□□ -1.67
CDH12P55289 RPS4XP1-201ENST00000482189 787 ntBASIC4.64□□□□□ -1.67
CDH12P55289 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.64□□□□□ -1.67
CDH12P55289 AC084024.2-201ENST00000503480 791 ntBASIC4.64□□□□□ -1.67
CDH12P55289 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.64□□□□□ -1.67
CDH12P55289 AC108471.1-201ENST00000513977 287 ntBASIC4.64□□□□□ -1.67
CDH12P55289 BX510359.5-201ENST00000515651 304 ntBASIC4.64□□□□□ -1.67
CDH12P55289 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.64□□□□□ -1.67
CDH12P55289 EIF4A2P5-201ENST00000529914 499 ntBASIC4.64□□□□□ -1.67
CDH12P55289 AC124293.1-201ENST00000530034 493 ntBASIC4.64□□□□□ -1.67
CDH12P55289 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC4.64□□□□□ -1.67
CDH12P55289 AC024940.3-201ENST00000538551 316 ntBASIC4.64□□□□□ -1.67
CDH12P55289 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC4.64□□□□□ -1.67
CDH12P55289 POLR2KP1-201ENST00000553226 168 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms