Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 RPS24P16-201ENST00000497294 392 ntBASIC4.66□□□□□ -1.66
SOX2P48431 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC4.66□□□□□ -1.66
SOX2P48431 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC4.66□□□□□ -1.66
SOX2P48431 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC4.66□□□□□ -1.66
SOX2P48431 APOBEC3AP1-201ENST00000511396 287 ntBASIC4.66□□□□□ -1.66
SOX2P48431 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC4.66□□□□□ -1.66
SOX2P48431 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.66□□□□□ -1.66
SOX2P48431 MTND4LP31-201ENST00000514859 294 ntBASIC4.66□□□□□ -1.66
SOX2P48431 SCARNA16.4-201ENST00000516956 187 ntBASIC4.66□□□□□ -1.66
SOX2P48431 RN7SKP99-201ENST00000517028 307 ntBASIC4.66□□□□□ -1.66
SOX2P48431 SNORA43.3-201ENST00000517240 103 ntBASIC4.66□□□□□ -1.66
SOX2P48431 AC011853.1-201ENST00000518911 454 ntBASIC4.66□□□□□ -1.66
SOX2P48431 IGKV2-36-201ENST00000519999 223 ntBASIC4.66□□□□□ -1.66
SOX2P48431 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.66□□□□□ -1.66
SOX2P48431 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC4.66□□□□□ -1.66
SOX2P48431 AC018442.3-201ENST00000523025 183 ntBASIC4.66□□□□□ -1.66
SOX2P48431 AP004607.2-201ENST00000533949 322 ntBASIC4.66□□□□□ -1.66
SOX2P48431 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC4.66□□□□□ -1.66
SOX2P48431 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SOX2P48431 AC006349.1-201ENST00000555526 235 ntBASIC4.66□□□□□ -1.66
SOX2P48431 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC4.66□□□□□ -1.66
SOX2P48431 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.66□□□□□ -1.66
SOX2P48431 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.66□□□□□ -1.66
SOX2P48431 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC4.66□□□□□ -1.66
SOX2P48431 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC4.66□□□□□ -1.66
SOX2P48431 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC4.66□□□□□ -1.66
SOX2P48431 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC4.66□□□□□ -1.66
SOX2P48431 RN7SL356P-201ENST00000582228 248 ntBASIC4.66□□□□□ -1.66
SOX2P48431 VN1R84P-201ENST00000593697 235 ntBASIC4.66□□□□□ -1.66
SOX2P48431 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.66□□□□□ -1.66
SOX2P48431 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.66□□□□□ -1.66
SOX2P48431 AL390838.2-201ENST00000602394 274 ntBASIC4.66□□□□□ -1.66
SOX2P48431 AC025165.5-201ENST00000602802 578 ntBASIC4.66□□□□□ -1.66
SOX2P48431 AC010738.1-201ENST00000604970 987 ntBASIC4.66□□□□□ -1.66
SOX2P48431 AL592221.1-201ENST00000605266 382 ntBASIC4.66□□□□□ -1.66
SOX2P48431 AC131235.4-201ENST00000609288 620 ntBASIC4.66□□□□□ -1.66
SOX2P48431 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4.66□□□□□ -1.66
SOX2P48431 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.66□□□□□ -1.66
SOX2P48431 AC073592.6-201ENST00000624271 415 ntBASIC4.66□□□□□ -1.66
SOX2P48431 AC116618.1-201ENST00000634617 774 ntBASIC4.66□□□□□ -1.66
SOX2P48431 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC4.66□□□□□ -1.66
SOX2P48431 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
SOX2P48431 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
SOX2P48431 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SOX2P48431 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.66□□□□□ -1.66
SOX2P48431 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
SOX2P48431 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
SOX2P48431 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SOX2P48431 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.66□□□□□ -1.66
SOX2P48431 AL022322.2-201ENST00000624072 20397 ntBASIC4.66□□□□□ -1.66
SOX2P48431 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.65□□□□□ -1.66
SOX2P48431 HSPA8P14-201ENST00000552265 1805 ntBASIC4.65□□□□□ -1.66
SOX2P48431 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
SOX2P48431 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SOX2P48431 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
SOX2P48431 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.65□□□□□ -1.67
SOX2P48431 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SOX2P48431 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.65□□□□□ -1.67
SOX2P48431 RN7SKP153-201ENST00000365026 316 ntBASIC4.65□□□□□ -1.67
SOX2P48431 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
SOX2P48431 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SOX2P48431 AL021407.1-201ENST00000404531 386 ntBASIC4.65□□□□□ -1.67
SOX2P48431 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.65□□□□□ -1.67
SOX2P48431 BTF3L4P1-201ENST00000413813 468 ntBASIC4.65□□□□□ -1.67
SOX2P48431 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.65□□□□□ -1.67
SOX2P48431 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC4.65□□□□□ -1.67
SOX2P48431 AC048351.1-201ENST00000420064 602 ntBASIC4.65□□□□□ -1.67
SOX2P48431 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.65□□□□□ -1.67
SOX2P48431 MTCO3P21-201ENST00000430791 643 ntBASIC4.65□□□□□ -1.67
SOX2P48431 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SOX2P48431 RPL12P17-201ENST00000432393 498 ntBASIC4.65□□□□□ -1.67
SOX2P48431 AC098826.1-201ENST00000433943 471 ntBASIC4.65□□□□□ -1.67
SOX2P48431 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.65□□□□□ -1.67
SOX2P48431 AP000936.3-201ENST00000438127 255 ntBASIC4.65□□□□□ -1.67
SOX2P48431 TXNP5-201ENST00000441043 315 ntBASIC4.65□□□□□ -1.67
SOX2P48431 GTF3AP5-201ENST00000442645 697 ntBASIC4.65□□□□□ -1.67
SOX2P48431 AL450996.1-201ENST00000445574 1202 ntBASIC4.65□□□□□ -1.67
SOX2P48431 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC4.65□□□□□ -1.67
SOX2P48431 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.65□□□□□ -1.67
SOX2P48431 FAR2P1-206ENST00000449736 709 ntBASIC4.65□□□□□ -1.67
SOX2P48431 GAPDHP14-201ENST00000450472 937 ntBASIC4.65□□□□□ -1.67
SOX2P48431 AC117394.1-201ENST00000477323 567 ntBASIC4.65□□□□□ -1.67
SOX2P48431 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC4.65□□□□□ -1.67
SOX2P48431 AC122718.2-201ENST00000505325 591 ntBASIC4.65□□□□□ -1.67
SOX2P48431 AC109481.1-201ENST00000509173 282 ntBASIC4.65□□□□□ -1.67
SOX2P48431 AC006499.4-201ENST00000510947 694 ntBASIC4.65□□□□□ -1.67
SOX2P48431 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC4.65□□□□□ -1.67
SOX2P48431 HNRNPKP5-201ENST00000515300 253 ntBASIC4.65□□□□□ -1.67
SOX2P48431 RNU6-1225P-201ENST00000516336 65 ntBASIC4.65□□□□□ -1.67
SOX2P48431 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.65□□□□□ -1.67
SOX2P48431 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.65□□□□□ -1.67
SOX2P48431 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.65□□□□□ -1.67
SOX2P48431 AC022360.1-201ENST00000521058 340 ntBASIC4.65□□□□□ -1.67
SOX2P48431 COX6B1P6-201ENST00000522347 255 ntBASIC4.65□□□□□ -1.67
SOX2P48431 OR5AZ1P-201ENST00000527448 943 ntBASIC4.65□□□□□ -1.67
SOX2P48431 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC4.65□□□□□ -1.67
SOX2P48431 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.65□□□□□ -1.67
SOX2P48431 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.65□□□□□ -1.67
SOX2P48431 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.65□□□□□ -1.67
SOX2P48431 IGBP1P1-201ENST00000554337 1009 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms