Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.23□□□□□ -1.73
CXCL12P48061 AL356968.2-201ENST00000412769 1257 ntBASIC4.23□□□□□ -1.73
CXCL12P48061 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.23□□□□□ -1.73
CXCL12P48061 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC4.23□□□□□ -1.73
CXCL12P48061 AC008280.1-201ENST00000418851 412 ntBASIC4.23□□□□□ -1.73
CXCL12P48061 PDSS1P1-201ENST00000422953 1114 ntBASIC4.23□□□□□ -1.73
CXCL12P48061 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.23□□□□□ -1.73
CXCL12P48061 TCEA1P3-201ENST00000443005 880 ntBASIC4.23□□□□□ -1.73
CXCL12P48061 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.23□□□□□ -1.73
CXCL12P48061 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CXCL12P48061 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CXCL12P48061 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.23□□□□□ -1.73
CXCL12P48061 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.23□□□□□ -1.73
CXCL12P48061 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.23□□□□□ -1.73
CXCL12P48061 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.23□□□□□ -1.73
CXCL12P48061 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.23□□□□□ -1.73
CXCL12P48061 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.23□□□□□ -1.73
CXCL12P48061 AL354798.1-201ENST00000622505 329 ntBASIC4.23□□□□□ -1.73
CXCL12P48061 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
CXCL12P48061 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.23□□□□□ -1.73
CXCL12P48061 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CXCL12P48061 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.23□□□□□ -1.73
CXCL12P48061 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
CXCL12P48061 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CXCL12P48061 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CXCL12P48061 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.22□□□□□ -1.73
CXCL12P48061 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.22□□□□□ -1.73
CXCL12P48061 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.22□□□□□ -1.73
CXCL12P48061 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CXCL12P48061 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.22□□□□□ -1.73
CXCL12P48061 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
CXCL12P48061 PCAT14-202ENST00000627127 3935 ntBASIC4.22□□□□□ -1.73
CXCL12P48061 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CXCL12P48061 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CXCL12P48061 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CXCL12P48061 RNU1-83P-201ENST00000363426 164 ntBASIC4.22□□□□□ -1.73
CXCL12P48061 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CXCL12P48061 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CXCL12P48061 SNORA11C-201ENST00000408532 129 ntBASIC4.22□□□□□ -1.73
CXCL12P48061 RNU4-6P-201ENST00000410804 122 ntBASIC4.22□□□□□ -1.73
CXCL12P48061 RAB9AP3-201ENST00000412737 573 ntBASIC4.22□□□□□ -1.73
CXCL12P48061 TPT1P2-201ENST00000413105 503 ntBASIC4.22□□□□□ -1.73
CXCL12P48061 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.22□□□□□ -1.73
CXCL12P48061 BTG3P1-201ENST00000435859 716 ntBASIC4.22□□□□□ -1.73
CXCL12P48061 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CXCL12P48061 RAB9AP1-201ENST00000449393 573 ntBASIC4.22□□□□□ -1.73
CXCL12P48061 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.22□□□□□ -1.73
CXCL12P48061 AC002553.2-201ENST00000453217 340 ntBASIC4.22□□□□□ -1.73
CXCL12P48061 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.22□□□□□ -1.73
CXCL12P48061 RPL38P1-201ENST00000460914 211 ntBASIC4.22□□□□□ -1.73
CXCL12P48061 RPS29P19-201ENST00000479709 171 ntBASIC4.22□□□□□ -1.73
CXCL12P48061 BLNK-209ENST00000495266 440 ntTSL 5 BASIC4.22□□□□□ -1.73
CXCL12P48061 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.22□□□□□ -1.73
CXCL12P48061 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.22□□□□□ -1.73
CXCL12P48061 AC026726.1-201ENST00000512859 601 ntBASIC4.22□□□□□ -1.73
CXCL12P48061 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.22□□□□□ -1.73
CXCL12P48061 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.22□□□□□ -1.73
CXCL12P48061 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.22□□□□□ -1.73
CXCL12P48061 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.22□□□□□ -1.73
CXCL12P48061 MIR4660-201ENST00000583549 74 ntBASIC4.22□□□□□ -1.73
CXCL12P48061 RN7SL435P-201ENST00000584418 282 ntBASIC4.22□□□□□ -1.73
CXCL12P48061 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.22□□□□□ -1.73
CXCL12P48061 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.22□□□□□ -1.73
CXCL12P48061 AL161756.2-201ENST00000604597 246 ntBASIC4.22□□□□□ -1.73
CXCL12P48061 AL160290.3-201ENST00000604869 165 ntBASIC4.22□□□□□ -1.73
CXCL12P48061 Z98200.1-201ENST00000607298 470 ntBASIC4.22□□□□□ -1.73
CXCL12P48061 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.22□□□□□ -1.73
CXCL12P48061 AC007546.2-201ENST00000623996 360 ntBASIC4.22□□□□□ -1.73
CXCL12P48061 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.22□□□□□ -1.73
CXCL12P48061 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.22□□□□□ -1.73
CXCL12P48061 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CXCL12P48061 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CXCL12P48061 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CXCL12P48061 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CXCL12P48061 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
CXCL12P48061 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
CXCL12P48061 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.21□□□□□ -1.73
CXCL12P48061 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.21□□□□□ -1.73
CXCL12P48061 AC011503.2-201ENST00000594230 1500 ntBASIC4.21□□□□□ -1.73
CXCL12P48061 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
CXCL12P48061 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.21□□□□□ -1.74
CXCL12P48061 RNA5SP119-201ENST00000362715 117 ntBASIC4.21□□□□□ -1.74
CXCL12P48061 AL592291.1-201ENST00000403830 352 ntBASIC4.21□□□□□ -1.74
CXCL12P48061 AL358178.1-201ENST00000407698 397 ntBASIC4.21□□□□□ -1.74
CXCL12P48061 SNORA74C-2-201ENST00000411179 201 ntBASIC4.21□□□□□ -1.74
CXCL12P48061 Z74021.1-201ENST00000423610 407 ntBASIC4.21□□□□□ -1.74
CXCL12P48061 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.21□□□□□ -1.74
CXCL12P48061 NPM1P48-201ENST00000436002 853 ntBASIC4.21□□□□□ -1.74
CXCL12P48061 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.21□□□□□ -1.74
CXCL12P48061 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.21□□□□□ -1.74
CXCL12P48061 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.21□□□□□ -1.74
CXCL12P48061 AP000942.1-201ENST00000463969 747 ntBASIC4.21□□□□□ -1.74
CXCL12P48061 ACTR3P3-201ENST00000480448 893 ntBASIC4.21□□□□□ -1.74
CXCL12P48061 AL139099.1-201ENST00000497398 403 ntBASIC4.21□□□□□ -1.74
CXCL12P48061 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.21□□□□□ -1.74
CXCL12P48061 RN7SKP141-201ENST00000516167 338 ntBASIC4.21□□□□□ -1.74
CXCL12P48061 AP000619.3-201ENST00000535634 1127 ntBASIC4.21□□□□□ -1.74
CXCL12P48061 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.21□□□□□ -1.74
CXCL12P48061 AL358913.1-201ENST00000554342 121 ntBASIC4.21□□□□□ -1.74
CXCL12P48061 AC027455.1-201ENST00000574104 594 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms