Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
MMP13P45452 Y_RNA.599-201ENST00000410489 109 ntBASIC5.12□□□□□ -1.59
MMP13P45452 RN7SKP278-201ENST00000410504 342 ntBASIC5.12□□□□□ -1.59
MMP13P45452 RN7SKP213-201ENST00000410746 298 ntBASIC5.12□□□□□ -1.59
MMP13P45452 DPPA2P3-201ENST00000411853 655 ntBASIC5.12□□□□□ -1.59
MMP13P45452 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC5.12□□□□□ -1.59
MMP13P45452 AL627308.1-201ENST00000435693 821 ntBASIC5.12□□□□□ -1.59
MMP13P45452 AC000041.1-201ENST00000439655 175 ntBASIC5.12□□□□□ -1.59
MMP13P45452 AL450023.3-201ENST00000440592 271 ntBASIC5.12□□□□□ -1.59
MMP13P45452 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.12□□□□□ -1.59
MMP13P45452 OR7E125P-201ENST00000443450 846 ntBASIC5.12□□□□□ -1.59
MMP13P45452 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.12□□□□□ -1.59
MMP13P45452 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.12□□□□□ -1.59
MMP13P45452 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.12□□□□□ -1.59
MMP13P45452 TCEA1P1-201ENST00000449716 880 ntBASIC5.12□□□□□ -1.59
MMP13P45452 AL133217.1-201ENST00000450980 425 ntBASIC5.12□□□□□ -1.59
MMP13P45452 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.12□□□□□ -1.59
MMP13P45452 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
MMP13P45452 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.12□□□□□ -1.59
MMP13P45452 AC147055.3-201ENST00000510547 851 ntBASIC5.12□□□□□ -1.59
MMP13P45452 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
MMP13P45452 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC5.12□□□□□ -1.59
MMP13P45452 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC5.12□□□□□ -1.59
MMP13P45452 AC012339.2-201ENST00000523996 453 ntBASIC5.12□□□□□ -1.59
MMP13P45452 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.12□□□□□ -1.59
MMP13P45452 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.12□□□□□ -1.59
MMP13P45452 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.12□□□□□ -1.59
MMP13P45452 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.12□□□□□ -1.59
MMP13P45452 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.12□□□□□ -1.59
MMP13P45452 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
MMP13P45452 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC5.12□□□□□ -1.59
MMP13P45452 AL158042.1-201ENST00000605338 460 ntBASIC5.12□□□□□ -1.59
MMP13P45452 AC018638.7-201ENST00000605836 1114 ntBASIC5.12□□□□□ -1.59
MMP13P45452 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC5.12□□□□□ -1.59
MMP13P45452 AC093799.2-201ENST00000610062 578 ntBASIC5.12□□□□□ -1.59
MMP13P45452 AL627230.1-201ENST00000613077 211 ntBASIC5.12□□□□□ -1.59
MMP13P45452 AL591926.8-201ENST00000616876 211 ntBASIC5.12□□□□□ -1.59
MMP13P45452 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
MMP13P45452 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
MMP13P45452 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
MMP13P45452 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
MMP13P45452 CASC19-206ENST00000641028 1430 ntBASIC5.12□□□□□ -1.59
MMP13P45452 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
MMP13P45452 AL022322.2-201ENST00000624072 20397 ntBASIC5.12□□□□□ -1.59
MMP13P45452 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
MMP13P45452 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.12□□□□□ -1.59
MMP13P45452 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
MMP13P45452 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
MMP13P45452 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
MMP13P45452 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.11□□□□□ -1.59
MMP13P45452 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.11□□□□□ -1.59
MMP13P45452 HSPA8P18-201ENST00000439846 1928 ntBASIC5.11□□□□□ -1.59
MMP13P45452 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
MMP13P45452 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.11□□□□□ -1.59
MMP13P45452 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
MMP13P45452 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
MMP13P45452 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
MMP13P45452 RNU6-249P-201ENST00000363016 102 ntBASIC5.11□□□□□ -1.59
MMP13P45452 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
MMP13P45452 SNORA70.10-201ENST00000384515 134 ntBASIC5.11□□□□□ -1.59
MMP13P45452 ATP5HP3-201ENST00000396994 486 ntBASIC5.11□□□□□ -1.59
MMP13P45452 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.11□□□□□ -1.59
MMP13P45452 HMGB3P7-201ENST00000400214 611 ntBASIC5.11□□□□□ -1.59
MMP13P45452 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC5.11□□□□□ -1.59
MMP13P45452 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
MMP13P45452 OR6C64P-201ENST00000419708 825 ntBASIC5.11□□□□□ -1.59
MMP13P45452 E2F6P2-201ENST00000420708 748 ntBASIC5.11□□□□□ -1.59
MMP13P45452 USP9YP26-201ENST00000421008 661 ntBASIC5.11□□□□□ -1.59
MMP13P45452 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.11□□□□□ -1.59
MMP13P45452 EIF4HP2-201ENST00000424380 563 ntBASIC5.11□□□□□ -1.59
MMP13P45452 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC5.11□□□□□ -1.59
MMP13P45452 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.11□□□□□ -1.59
MMP13P45452 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.11□□□□□ -1.59
MMP13P45452 AL606490.7-201ENST00000433136 191 ntBASIC5.11□□□□□ -1.59
MMP13P45452 AC007563.3-201ENST00000433233 371 ntBASIC5.11□□□□□ -1.59
MMP13P45452 NMNAT1P2-201ENST00000435192 860 ntBASIC5.11□□□□□ -1.59
MMP13P45452 MTND4P6-201ENST00000438297 472 ntBASIC5.11□□□□□ -1.59
MMP13P45452 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC5.11□□□□□ -1.59
MMP13P45452 AC073648.4-201ENST00000442655 781 ntBASIC5.11□□□□□ -1.59
MMP13P45452 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.11□□□□□ -1.59
MMP13P45452 AL157884.3-201ENST00000448273 1184 ntBASIC5.11□□□□□ -1.59
MMP13P45452 AC073850.1-201ENST00000449243 255 ntBASIC5.11□□□□□ -1.59
MMP13P45452 MYO5BP2-201ENST00000449815 1277 ntBASIC5.11□□□□□ -1.59
MMP13P45452 MTCO3P16-201ENST00000454456 754 ntBASIC5.11□□□□□ -1.59
MMP13P45452 HMGB1P4-201ENST00000455362 567 ntBASIC5.11□□□□□ -1.59
MMP13P45452 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC5.11□□□□□ -1.59
MMP13P45452 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC5.11□□□□□ -1.59
MMP13P45452 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.11□□□□□ -1.59
MMP13P45452 RPS3AP22-201ENST00000488297 769 ntBASIC5.11□□□□□ -1.59
MMP13P45452 RN7SL591P-201ENST00000496150 292 ntBASIC5.11□□□□□ -1.59
MMP13P45452 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
MMP13P45452 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.11□□□□□ -1.59
MMP13P45452 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.11□□□□□ -1.59
MMP13P45452 AC008494.2-201ENST00000514544 370 ntBASIC5.11□□□□□ -1.59
MMP13P45452 RNA5SP43-201ENST00000516559 110 ntBASIC5.11□□□□□ -1.59
MMP13P45452 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.11□□□□□ -1.59
MMP13P45452 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.11□□□□□ -1.59
MMP13P45452 AC013701.1-201ENST00000522657 465 ntBASIC5.11□□□□□ -1.59
MMP13P45452 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.11□□□□□ -1.59
MMP13P45452 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms