Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.97□□□□□ -1.61
HADHAP40939 RN7SKP147-201ENST00000517154 244 ntBASIC4.97□□□□□ -1.61
HADHAP40939 AC008562.1-201ENST00000521763 330 ntBASIC4.97□□□□□ -1.61
HADHAP40939 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HADHAP40939 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.97□□□□□ -1.61
HADHAP40939 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.97□□□□□ -1.61
HADHAP40939 HNRNPCP4-201ENST00000571636 900 ntBASIC4.97□□□□□ -1.61
HADHAP40939 AC110743.1-201ENST00000584870 478 ntBASIC4.97□□□□□ -1.61
HADHAP40939 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.97□□□□□ -1.61
HADHAP40939 AC068620.3-201ENST00000602749 560 ntBASIC4.97□□□□□ -1.61
HADHAP40939 RNF138P2-201ENST00000603490 592 ntBASIC4.97□□□□□ -1.61
HADHAP40939 AC116651.1-201ENST00000609724 556 ntBASIC4.97□□□□□ -1.61
HADHAP40939 AL049539.1-201ENST00000611964 459 ntBASIC4.97□□□□□ -1.61
HADHAP40939 AC023509.5-201ENST00000617434 807 ntBASIC4.97□□□□□ -1.61
HADHAP40939 AC090510.2-201ENST00000617465 629 ntBASIC4.97□□□□□ -1.61
HADHAP40939 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.97□□□□□ -1.61
HADHAP40939 AL049777.1-201ENST00000622740 518 ntBASIC4.97□□□□□ -1.61
HADHAP40939 AL353662.3-201ENST00000625131 237 ntBASIC4.97□□□□□ -1.61
HADHAP40939 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.97□□□□□ -1.61
HADHAP40939 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.97□□□□□ -1.61
HADHAP40939 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HADHAP40939 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HADHAP40939 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.97□□□□□ -1.61
HADHAP40939 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HADHAP40939 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.96□□□□□ -1.61
HADHAP40939 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.96□□□□□ -1.61
HADHAP40939 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.96□□□□□ -1.61
HADHAP40939 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.96□□□□□ -1.61
HADHAP40939 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.61
HADHAP40939 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HADHAP40939 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
HADHAP40939 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.96□□□□□ -1.62
HADHAP40939 AC000123.3-201ENST00000624029 4975 ntBASIC4.96□□□□□ -1.62
HADHAP40939 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HADHAP40939 RNA5SP428-201ENST00000365129 132 ntBASIC4.96□□□□□ -1.62
HADHAP40939 AC234772.1-201ENST00000377927 937 ntBASIC4.96□□□□□ -1.62
HADHAP40939 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
HADHAP40939 AL024507.1-201ENST00000412741 274 ntBASIC4.96□□□□□ -1.62
HADHAP40939 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.96□□□□□ -1.62
HADHAP40939 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC4.96□□□□□ -1.62
HADHAP40939 GJA6P-201ENST00000415117 1042 ntBASIC4.96□□□□□ -1.62
HADHAP40939 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.96□□□□□ -1.62
HADHAP40939 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.96□□□□□ -1.62
HADHAP40939 AC002542.1-201ENST00000440683 193 ntBASIC4.96□□□□□ -1.62
HADHAP40939 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.96□□□□□ -1.62
HADHAP40939 HSFY3P-201ENST00000444242 1191 ntBASIC4.96□□□□□ -1.62
HADHAP40939 TPTE2P6-202ENST00000445572 1007 ntBASIC4.96□□□□□ -1.62
HADHAP40939 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.96□□□□□ -1.62
HADHAP40939 BX284632.1-201ENST00000478218 541 ntBASIC4.96□□□□□ -1.62
HADHAP40939 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HADHAP40939 NAMPTP2-201ENST00000505629 1115 ntBASIC4.96□□□□□ -1.62
HADHAP40939 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.96□□□□□ -1.62
HADHAP40939 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.96□□□□□ -1.62
HADHAP40939 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC4.96□□□□□ -1.62
HADHAP40939 PCNPP1-201ENST00000552501 511 ntBASIC4.96□□□□□ -1.62
HADHAP40939 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.96□□□□□ -1.62
HADHAP40939 AC090751.1-201ENST00000566966 267 ntBASIC4.96□□□□□ -1.62
HADHAP40939 MIR4700-201ENST00000578311 74 ntBASIC4.96□□□□□ -1.62
HADHAP40939 MIR4691-201ENST00000583764 85 ntBASIC4.96□□□□□ -1.62
HADHAP40939 AC133644.2-201ENST00000608142 540 ntBASIC4.96□□□□□ -1.62
HADHAP40939 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.96□□□□□ -1.62
HADHAP40939 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.96□□□□□ -1.62
HADHAP40939 OR2L1P-202ENST00000641567 1023 ntBASIC4.96□□□□□ -1.62
HADHAP40939 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HADHAP40939 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.96□□□□□ -1.62
HADHAP40939 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.96□□□□□ -1.62
HADHAP40939 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.96□□□□□ -1.62
HADHAP40939 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.96□□□□□ -1.62
HADHAP40939 NSRP1P1-201ENST00000444067 1693 ntBASIC4.96□□□□□ -1.62
HADHAP40939 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.96□□□□□ -1.62
HADHAP40939 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.95□□□□□ -1.62
HADHAP40939 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
HADHAP40939 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HADHAP40939 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.95□□□□□ -1.62
HADHAP40939 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HADHAP40939 USP9YP4-201ENST00000424401 1745 ntBASIC4.95□□□□□ -1.62
HADHAP40939 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
HADHAP40939 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
HADHAP40939 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HADHAP40939 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
HADHAP40939 RNU6-1339P-201ENST00000363574 91 ntBASIC4.95□□□□□ -1.62
HADHAP40939 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HADHAP40939 RNU6-1176P-201ENST00000390955 107 ntBASIC4.95□□□□□ -1.62
HADHAP40939 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.95□□□□□ -1.62
HADHAP40939 AP002530.1-201ENST00000405705 684 ntBASIC4.95□□□□□ -1.62
HADHAP40939 MIR1303-201ENST00000408625 86 ntBASIC4.95□□□□□ -1.62
HADHAP40939 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.95□□□□□ -1.62
HADHAP40939 EIF4HP2-201ENST00000424380 563 ntBASIC4.95□□□□□ -1.62
HADHAP40939 RPS6P14-201ENST00000425165 719 ntBASIC4.95□□□□□ -1.62
HADHAP40939 DYNLL1P7-201ENST00000429273 258 ntBASIC4.95□□□□□ -1.62
HADHAP40939 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
HADHAP40939 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.95□□□□□ -1.62
HADHAP40939 FABP5P3-201ENST00000437960 408 ntBASIC4.95□□□□□ -1.62
HADHAP40939 AC073052.1-201ENST00000440417 714 ntBASIC4.95□□□□□ -1.62
HADHAP40939 RPS7P5-201ENST00000441482 581 ntBASIC4.95□□□□□ -1.62
HADHAP40939 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.95□□□□□ -1.62
HADHAP40939 GEMIN8P3-201ENST00000445417 720 ntBASIC4.95□□□□□ -1.62
HADHAP40939 HMGN1P5-201ENST00000448591 263 ntBASIC4.95□□□□□ -1.62
HADHAP40939 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.95□□□□□ -1.62
HADHAP40939 CCNB1IP1P3-201ENST00000454702 829 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms