Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC5□□□□□ -1.61
HOXC13P31276 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC5□□□□□ -1.61
HOXC13P31276 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
HOXC13P31276 AC010680.3-201ENST00000604215 520 ntBASIC5□□□□□ -1.61
HOXC13P31276 AC073137.1-201ENST00000605636 634 ntBASIC5□□□□□ -1.61
HOXC13P31276 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5□□□□□ -1.61
HOXC13P31276 AC007497.1-201ENST00000610421 561 ntBASIC5□□□□□ -1.61
HOXC13P31276 AC068724.3-201ENST00000625906 87 ntBASIC5□□□□□ -1.61
HOXC13P31276 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5□□□□□ -1.61
HOXC13P31276 AL353743.4-201ENST00000422653 1547 ntBASIC5□□□□□ -1.61
HOXC13P31276 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
HOXC13P31276 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5□□□□□ -1.61
HOXC13P31276 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
HOXC13P31276 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5□□□□□ -1.61
HOXC13P31276 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HOXC13P31276 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
HOXC13P31276 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HOXC13P31276 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HOXC13P31276 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HOXC13P31276 KARSP3-201ENST00000571212 1504 ntBASIC4.99□□□□□ -1.61
HOXC13P31276 MIR708-201ENST00000390708 88 ntBASIC4.99□□□□□ -1.61
HOXC13P31276 MIR1193-201ENST00000408109 78 ntBASIC4.99□□□□□ -1.61
HOXC13P31276 U3.35-201ENST00000408405 208 ntBASIC4.99□□□□□ -1.61
HOXC13P31276 AC114755.2-201ENST00000413520 361 ntBASIC4.99□□□□□ -1.61
HOXC13P31276 AL592293.2-201ENST00000422292 996 ntBASIC4.99□□□□□ -1.61
HOXC13P31276 MTND2P9-201ENST00000422293 931 ntBASIC4.99□□□□□ -1.61
HOXC13P31276 GTF2IP2-201ENST00000424290 697 ntBASIC4.99□□□□□ -1.61
HOXC13P31276 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.99□□□□□ -1.61
HOXC13P31276 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC4.99□□□□□ -1.61
HOXC13P31276 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.99□□□□□ -1.61
HOXC13P31276 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.99□□□□□ -1.61
HOXC13P31276 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.99□□□□□ -1.61
HOXC13P31276 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.99□□□□□ -1.61
HOXC13P31276 RN7SKP141-201ENST00000516167 338 ntBASIC4.99□□□□□ -1.61
HOXC13P31276 RNU6-709P-201ENST00000517257 104 ntBASIC4.99□□□□□ -1.61
HOXC13P31276 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.99□□□□□ -1.61
HOXC13P31276 BUD31P1-201ENST00000521828 359 ntBASIC4.99□□□□□ -1.61
HOXC13P31276 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.99□□□□□ -1.61
HOXC13P31276 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.99□□□□□ -1.61
HOXC13P31276 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.99□□□□□ -1.61
HOXC13P31276 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.99□□□□□ -1.61
HOXC13P31276 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HOXC13P31276 SNORA74C-1-201ENST00000580726 201 ntBASIC4.99□□□□□ -1.61
HOXC13P31276 KPNA2P3-201ENST00000584190 848 ntBASIC4.99□□□□□ -1.61
HOXC13P31276 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.99□□□□□ -1.61
HOXC13P31276 ZNF92P3-201ENST00000596594 954 ntBASIC4.99□□□□□ -1.61
HOXC13P31276 AL121932.1-201ENST00000605542 214 ntBASIC4.99□□□□□ -1.61
HOXC13P31276 AC144521.1-201ENST00000607148 956 ntBASIC4.99□□□□□ -1.61
HOXC13P31276 AL355816.2-201ENST00000610049 647 ntBASIC4.99□□□□□ -1.61
HOXC13P31276 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.99□□□□□ -1.61
HOXC13P31276 AC005962.2-201ENST00000611427 652 ntBASIC4.99□□□□□ -1.61
HOXC13P31276 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.99□□□□□ -1.61
HOXC13P31276 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
HOXC13P31276 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.99□□□□□ -1.61
HOXC13P31276 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HOXC13P31276 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
HOXC13P31276 AL133412.1-201ENST00000380194 2992 ntBASIC4.99□□□□□ -1.61
HOXC13P31276 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.99□□□□□ -1.61
HOXC13P31276 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.99□□□□□ -1.61
HOXC13P31276 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
HOXC13P31276 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.98□□□□□ -1.61
HOXC13P31276 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
HOXC13P31276 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HOXC13P31276 AC008549.2-201ENST00000333482 706 ntBASIC4.98□□□□□ -1.61
HOXC13P31276 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.98□□□□□ -1.61
HOXC13P31276 TAF9BP2-201ENST00000400856 499 ntBASIC4.98□□□□□ -1.61
HOXC13P31276 RNU4-74P-201ENST00000411280 161 ntBASIC4.98□□□□□ -1.61
HOXC13P31276 AC114814.2-201ENST00000419195 485 ntBASIC4.98□□□□□ -1.61
HOXC13P31276 RPS12P5-201ENST00000423449 371 ntBASIC4.98□□□□□ -1.61
HOXC13P31276 FABP7P1-201ENST00000424004 391 ntBASIC4.98□□□□□ -1.61
HOXC13P31276 NRBF2P3-201ENST00000432731 865 ntBASIC4.98□□□□□ -1.61
HOXC13P31276 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.98□□□□□ -1.61
HOXC13P31276 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.98□□□□□ -1.61
HOXC13P31276 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.98□□□□□ -1.61
HOXC13P31276 MTCYBP21-201ENST00000443300 1113 ntBASIC4.98□□□□□ -1.61
HOXC13P31276 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.98□□□□□ -1.61
HOXC13P31276 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.98□□□□□ -1.61
HOXC13P31276 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.98□□□□□ -1.61
HOXC13P31276 SCARNA22-201ENST00000503991 125 ntBASIC4.98□□□□□ -1.61
HOXC13P31276 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.98□□□□□ -1.61
HOXC13P31276 RN7SKP122-201ENST00000515923 296 ntBASIC4.98□□□□□ -1.61
HOXC13P31276 AC103833.1-201ENST00000517442 172 ntBASIC4.98□□□□□ -1.61
HOXC13P31276 AC134698.5-201ENST00000519444 336 ntBASIC4.98□□□□□ -1.61
HOXC13P31276 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.98□□□□□ -1.61
HOXC13P31276 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.98□□□□□ -1.61
HOXC13P31276 OR8K2P-201ENST00000524645 927 ntBASIC4.98□□□□□ -1.61
HOXC13P31276 AP003168.1-201ENST00000530091 307 ntBASIC4.98□□□□□ -1.61
HOXC13P31276 AC022882.1-201ENST00000532142 501 ntBASIC4.98□□□□□ -1.61
HOXC13P31276 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC4.98□□□□□ -1.61
HOXC13P31276 POLR2KP1-201ENST00000553226 168 ntBASIC4.98□□□□□ -1.61
HOXC13P31276 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.98□□□□□ -1.61
HOXC13P31276 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.98□□□□□ -1.61
HOXC13P31276 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.98□□□□□ -1.61
HOXC13P31276 CYCSP40-201ENST00000575927 294 ntBASIC4.98□□□□□ -1.61
HOXC13P31276 RN7SL690P-201ENST00000582087 240 ntBASIC4.98□□□□□ -1.61
HOXC13P31276 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.98□□□□□ -1.61
HOXC13P31276 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.98□□□□□ -1.61
HOXC13P31276 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.98□□□□□ -1.61
HOXC13P31276 AC135178.6-201ENST00000605314 398 ntBASIC4.98□□□□□ -1.61
HOXC13P31276 AL450270.1-201ENST00000606160 391 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms