Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AL645927.2-201ENST00000618350 349 ntBASIC5.02□□□□□ -1.61
HOXC8P31273 MIR6891-201ENST00000618788 93 ntBASIC5.02□□□□□ -1.61
HOXC8P31273 AL023881.1-201ENST00000621088 301 ntBASIC5.02□□□□□ -1.61
HOXC8P31273 AP000843.1-201ENST00000624880 701 ntBASIC5.02□□□□□ -1.61
HOXC8P31273 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC5.02□□□□□ -1.61
HOXC8P31273 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HOXC8P31273 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.02□□□□□ -1.61
HOXC8P31273 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HOXC8P31273 LINC00622-201ENST00000562811 1570 ntBASIC5.02□□□□□ -1.61
HOXC8P31273 HSPD1P11-201ENST00000508643 1702 ntBASIC5.02□□□□□ -1.61
HOXC8P31273 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HOXC8P31273 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.02□□□□□ -1.61
HOXC8P31273 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
HOXC8P31273 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
HOXC8P31273 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
HOXC8P31273 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
HOXC8P31273 AL138820.1-201ENST00000617901 5305 ntBASIC5.02□□□□□ -1.61
HOXC8P31273 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC5.02□□□□□ -1.61
HOXC8P31273 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.01□□□□□ -1.61
HOXC8P31273 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HOXC8P31273 AC107027.3-201ENST00000565095 3473 ntBASIC5.01□□□□□ -1.61
HOXC8P31273 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
HOXC8P31273 AL445487.1-201ENST00000415694 1580 ntBASIC5.01□□□□□ -1.61
HOXC8P31273 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HOXC8P31273 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.01□□□□□ -1.61
HOXC8P31273 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HOXC8P31273 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
HOXC8P31273 OR5P1P-201ENST00000299512 925 ntBASIC5.01□□□□□ -1.61
HOXC8P31273 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC5.01□□□□□ -1.61
HOXC8P31273 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
HOXC8P31273 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HOXC8P31273 TAF9BP2-201ENST00000400856 499 ntBASIC5.01□□□□□ -1.61
HOXC8P31273 MIR1193-201ENST00000408109 78 ntBASIC5.01□□□□□ -1.61
HOXC8P31273 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.01□□□□□ -1.61
HOXC8P31273 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HOXC8P31273 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HOXC8P31273 AL139095.3-201ENST00000419672 1203 ntBASIC5.01□□□□□ -1.61
HOXC8P31273 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC5.01□□□□□ -1.61
HOXC8P31273 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.01□□□□□ -1.61
HOXC8P31273 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.01□□□□□ -1.61
HOXC8P31273 AC074367.1-201ENST00000438685 1125 ntBASIC5.01□□□□□ -1.61
HOXC8P31273 AL589765.3-201ENST00000446084 462 ntBASIC5.01□□□□□ -1.61
HOXC8P31273 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.01□□□□□ -1.61
HOXC8P31273 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.01□□□□□ -1.61
HOXC8P31273 DHFRP3-201ENST00000455595 559 ntBASIC5.01□□□□□ -1.61
HOXC8P31273 RNU6-1218P-201ENST00000458990 108 ntBASIC5.01□□□□□ -1.61
HOXC8P31273 RPL7AP28-201ENST00000464513 571 ntBASIC5.01□□□□□ -1.61
HOXC8P31273 RPL23AP12-201ENST00000467573 473 ntBASIC5.01□□□□□ -1.61
HOXC8P31273 AC025768.1-201ENST00000510057 267 ntBASIC5.01□□□□□ -1.61
HOXC8P31273 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HOXC8P31273 RNA5SP230-201ENST00000517039 122 ntBASIC5.01□□□□□ -1.61
HOXC8P31273 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HOXC8P31273 CYCSP29-201ENST00000533731 318 ntBASIC5.01□□□□□ -1.61
HOXC8P31273 AC025884.1-201ENST00000556034 378 ntBASIC5.01□□□□□ -1.61
HOXC8P31273 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC5.01□□□□□ -1.61
HOXC8P31273 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.01□□□□□ -1.61
HOXC8P31273 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.01□□□□□ -1.61
HOXC8P31273 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.01□□□□□ -1.61
HOXC8P31273 PSMA6P4-201ENST00000603247 718 ntBASIC5.01□□□□□ -1.61
HOXC8P31273 BNIP3P19-201ENST00000605397 577 ntBASIC5.01□□□□□ -1.61
HOXC8P31273 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.01□□□□□ -1.61
HOXC8P31273 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HOXC8P31273 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
HOXC8P31273 AP001002.1-201ENST00000625148 1513 ntBASIC5.01□□□□□ -1.61
HOXC8P31273 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HOXC8P31273 AL731566.1-201ENST00000620490 1937 ntBASIC5.01□□□□□ -1.61
HOXC8P31273 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
HOXC8P31273 EIF2AP4-201ENST00000424793 1781 ntBASIC5.01□□□□□ -1.61
HOXC8P31273 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
HOXC8P31273 AL391684.1-202ENST00000641293 1636 ntBASIC5.01□□□□□ -1.61
HOXC8P31273 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
HOXC8P31273 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
HOXC8P31273 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5□□□□□ -1.61
HOXC8P31273 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5□□□□□ -1.61
HOXC8P31273 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5□□□□□ -1.61
HOXC8P31273 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5□□□□□ -1.61
HOXC8P31273 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
HOXC8P31273 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5□□□□□ -1.61
HOXC8P31273 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC5□□□□□ -1.61
HOXC8P31273 RNA5SP366-201ENST00000365454 123 ntBASIC5□□□□□ -1.61
HOXC8P31273 HMGB1P10-201ENST00000395823 563 ntBASIC5□□□□□ -1.61
HOXC8P31273 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5□□□□□ -1.61
HOXC8P31273 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5□□□□□ -1.61
HOXC8P31273 AC073464.3-201ENST00000422564 712 ntBASIC5□□□□□ -1.61
HOXC8P31273 ELOCP6-201ENST00000429066 328 ntBASIC5□□□□□ -1.61
HOXC8P31273 ACTR3P2-201ENST00000439585 1257 ntBASIC5□□□□□ -1.61
HOXC8P31273 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC5□□□□□ -1.61
HOXC8P31273 MTCYBP21-201ENST00000443300 1113 ntBASIC5□□□□□ -1.61
HOXC8P31273 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5□□□□□ -1.61
HOXC8P31273 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5□□□□□ -1.61
HOXC8P31273 ZNF736P6Y-201ENST00000447526 1213 ntBASIC5□□□□□ -1.61
HOXC8P31273 ELOCP12-201ENST00000458706 328 ntBASIC5□□□□□ -1.61
HOXC8P31273 AC015908.1-201ENST00000478739 476 ntBASIC5□□□□□ -1.61
HOXC8P31273 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC5□□□□□ -1.61
HOXC8P31273 AC103833.1-201ENST00000517442 172 ntBASIC5□□□□□ -1.61
HOXC8P31273 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5□□□□□ -1.61
HOXC8P31273 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5□□□□□ -1.61
HOXC8P31273 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC5□□□□□ -1.61
HOXC8P31273 AC138832.1-201ENST00000522871 556 ntBASIC5□□□□□ -1.61
HOXC8P31273 TRAV8-5-201ENST00000537369 341 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms