Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
CNGA1P29973 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CNGA1P29973 AC097063.1-201ENST00000426714 1797 ntBASIC6.09□□□□□ -1.43
CNGA1P29973 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CNGA1P29973 AL512646.1-201ENST00000269395 1077 ntBASIC6.09□□□□□ -1.43
CNGA1P29973 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
CNGA1P29973 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CNGA1P29973 LRRC37BP1-201ENST00000398851 714 ntBASIC6.09□□□□□ -1.43
CNGA1P29973 GSTA8P-201ENST00000404253 637 ntBASIC6.09□□□□□ -1.43
CNGA1P29973 RNU2-65P-201ENST00000410162 185 ntBASIC6.09□□□□□ -1.43
CNGA1P29973 GSTM3P2-201ENST00000412746 530 ntBASIC6.09□□□□□ -1.43
CNGA1P29973 RPSAP35-201ENST00000413753 818 ntBASIC6.09□□□□□ -1.43
CNGA1P29973 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC6.09□□□□□ -1.43
CNGA1P29973 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC6.09□□□□□ -1.43
CNGA1P29973 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC6.09□□□□□ -1.43
CNGA1P29973 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC6.09□□□□□ -1.43
CNGA1P29973 MTCO1P54-201ENST00000430139 712 ntBASIC6.09□□□□□ -1.43
CNGA1P29973 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC6.09□□□□□ -1.43
CNGA1P29973 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC6.09□□□□□ -1.43
CNGA1P29973 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC6.09□□□□□ -1.43
CNGA1P29973 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.09□□□□□ -1.43
CNGA1P29973 AC234781.3-201ENST00000452540 973 ntBASIC6.09□□□□□ -1.43
CNGA1P29973 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC6.09□□□□□ -1.43
CNGA1P29973 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CNGA1P29973 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC6.09□□□□□ -1.43
CNGA1P29973 AC104971.1-201ENST00000495117 578 ntBASIC6.09□□□□□ -1.43
CNGA1P29973 AC008885.2-201ENST00000509506 930 ntBASIC6.09□□□□□ -1.43
CNGA1P29973 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.09□□□□□ -1.43
CNGA1P29973 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC6.09□□□□□ -1.43
CNGA1P29973 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC6.09□□□□□ -1.43
CNGA1P29973 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC6.09□□□□□ -1.43
CNGA1P29973 NBEAP1-201ENST00000554452 979 ntBASIC6.09□□□□□ -1.43
CNGA1P29973 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC6.09□□□□□ -1.43
CNGA1P29973 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.09□□□□□ -1.43
CNGA1P29973 AGGF1P6-201ENST00000569213 976 ntBASIC6.09□□□□□ -1.43
CNGA1P29973 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.09□□□□□ -1.43
CNGA1P29973 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC6.09□□□□□ -1.43
CNGA1P29973 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC6.09□□□□□ -1.43
CNGA1P29973 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC6.09□□□□□ -1.43
CNGA1P29973 PSMA6P4-201ENST00000603247 718 ntBASIC6.09□□□□□ -1.43
CNGA1P29973 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.09□□□□□ -1.43
CNGA1P29973 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC6.09□□□□□ -1.43
CNGA1P29973 AC105227.2-201ENST00000615075 605 ntBASIC6.09□□□□□ -1.43
CNGA1P29973 uc_338.18-201ENST00000615451 175 ntBASIC6.09□□□□□ -1.43
CNGA1P29973 AC138965.3-201ENST00000623875 498 ntBASIC6.09□□□□□ -1.43
CNGA1P29973 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CNGA1P29973 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC6.09□□□□□ -1.43
CNGA1P29973 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
CNGA1P29973 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
CNGA1P29973 HSPA8P14-201ENST00000552265 1805 ntBASIC6.09□□□□□ -1.44
CNGA1P29973 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.08□□□□□ -1.44
CNGA1P29973 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CNGA1P29973 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC6.08□□□□□ -1.44
CNGA1P29973 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.08□□□□□ -1.44
CNGA1P29973 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
CNGA1P29973 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC6.08□□□□□ -1.44
CNGA1P29973 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC6.08□□□□□ -1.44
CNGA1P29973 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CNGA1P29973 AC092162.3-201ENST00000624511 1624 ntBASIC6.08□□□□□ -1.44
CNGA1P29973 RN7SKP104-201ENST00000362605 328 ntBASIC6.08□□□□□ -1.44
CNGA1P29973 RNU6-560P-201ENST00000364007 108 ntBASIC6.08□□□□□ -1.44
CNGA1P29973 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC6.08□□□□□ -1.44
CNGA1P29973 Y_RNA.465-201ENST00000384293 102 ntBASIC6.08□□□□□ -1.44
CNGA1P29973 RNA5SP187-201ENST00000384400 119 ntBASIC6.08□□□□□ -1.44
CNGA1P29973 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.08□□□□□ -1.44
CNGA1P29973 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC6.08□□□□□ -1.44
CNGA1P29973 AC073143.1-201ENST00000436316 395 ntBASIC6.08□□□□□ -1.44
CNGA1P29973 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC6.08□□□□□ -1.44
CNGA1P29973 HMGB1P48-201ENST00000446155 598 ntBASIC6.08□□□□□ -1.44
CNGA1P29973 AC104306.1-201ENST00000449702 371 ntBASIC6.08□□□□□ -1.44
CNGA1P29973 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.08□□□□□ -1.44
CNGA1P29973 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC6.08□□□□□ -1.44
CNGA1P29973 RPL7AP10-201ENST00000481016 791 ntBASIC6.08□□□□□ -1.44
CNGA1P29973 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC6.08□□□□□ -1.44
CNGA1P29973 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC6.08□□□□□ -1.44
CNGA1P29973 DYNLL1P6-201ENST00000503440 264 ntBASIC6.08□□□□□ -1.44
CNGA1P29973 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC6.08□□□□□ -1.44
CNGA1P29973 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC6.08□□□□□ -1.44
CNGA1P29973 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC6.08□□□□□ -1.44
CNGA1P29973 AC092709.1-201ENST00000521355 1045 ntBASIC6.08□□□□□ -1.44
CNGA1P29973 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC6.08□□□□□ -1.44
CNGA1P29973 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC6.08□□□□□ -1.44
CNGA1P29973 AC137768.1-201ENST00000549998 553 ntBASIC6.08□□□□□ -1.44
CNGA1P29973 AC004217.3-201ENST00000551552 878 ntBASIC6.08□□□□□ -1.44
CNGA1P29973 AC009962.1-201ENST00000567327 3813 ntBASIC6.08□□□□□ -1.44
CNGA1P29973 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC6.08□□□□□ -1.44
CNGA1P29973 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC6.08□□□□□ -1.44
CNGA1P29973 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC6.08□□□□□ -1.44
CNGA1P29973 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.08□□□□□ -1.44
CNGA1P29973 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC6.08□□□□□ -1.44
CNGA1P29973 AL353778.1-201ENST00000603149 408 ntBASIC6.08□□□□□ -1.44
CNGA1P29973 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC6.08□□□□□ -1.44
CNGA1P29973 AC006363.1-201ENST00000603806 463 ntBASIC6.08□□□□□ -1.44
CNGA1P29973 AC023158.2-201ENST00000614876 543 ntBASIC6.08□□□□□ -1.44
CNGA1P29973 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC6.08□□□□□ -1.44
CNGA1P29973 AC091905.4-201ENST00000623432 202 ntBASIC6.08□□□□□ -1.44
CNGA1P29973 CR392039.4-201ENST00000624968 501 ntBASIC6.08□□□□□ -1.44
CNGA1P29973 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC6.08□□□□□ -1.44
CNGA1P29973 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
CNGA1P29973 AC019072.1-201ENST00000604535 1551 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms