Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
RFX1P22670 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RFX1P22670 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC7.08□□□□□ -1.28
RFX1P22670 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC7.08□□□□□ -1.28
RFX1P22670 AC119674.1-213ENST00000641177 1386 ntBASIC7.08□□□□□ -1.28
RFX1P22670 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RFX1P22670 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
RFX1P22670 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC7.07□□□□□ -1.28
RFX1P22670 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC7.07□□□□□ -1.28
RFX1P22670 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RFX1P22670 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RFX1P22670 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
RFX1P22670 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC7.07□□□□□ -1.28
RFX1P22670 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
RFX1P22670 AC110373.1-201ENST00000505994 3505 ntBASIC7.07□□□□□ -1.28
RFX1P22670 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC7.07□□□□□ -1.28
RFX1P22670 AC009779.8-201ENST00000641684 4384 ntBASIC7.07□□□□□ -1.28
RFX1P22670 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
RFX1P22670 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
RFX1P22670 OR9K1P-201ENST00000326513 941 ntBASIC7.07□□□□□ -1.28
RFX1P22670 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RFX1P22670 RNY4P34-201ENST00000364779 95 ntBASIC7.07□□□□□ -1.28
RFX1P22670 RNU6-441P-201ENST00000384545 106 ntBASIC7.07□□□□□ -1.28
RFX1P22670 AC087752.1-201ENST00000391360 558 ntBASIC7.07□□□□□ -1.28
RFX1P22670 AL590635.1-201ENST00000406314 586 ntBASIC7.07□□□□□ -1.28
RFX1P22670 RNA5SP431-201ENST00000410312 120 ntBASIC7.07□□□□□ -1.28
RFX1P22670 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC7.07□□□□□ -1.28
RFX1P22670 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC7.07□□□□□ -1.28
RFX1P22670 MTCYBP45-201ENST00000435243 565 ntBASIC7.07□□□□□ -1.28
RFX1P22670 ARPC3P1-201ENST00000437218 533 ntBASIC7.07□□□□□ -1.28
RFX1P22670 USP9YP8-201ENST00000441913 500 ntBASIC7.07□□□□□ -1.28
RFX1P22670 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC7.07□□□□□ -1.28
RFX1P22670 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RFX1P22670 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC7.07□□□□□ -1.28
RFX1P22670 MTCO3P20-201ENST00000454926 688 ntBASIC7.07□□□□□ -1.28
RFX1P22670 RPL7P22-201ENST00000466005 733 ntBASIC7.07□□□□□ -1.28
RFX1P22670 AP000852.1-201ENST00000472460 573 ntBASIC7.07□□□□□ -1.28
RFX1P22670 AC090453.1-201ENST00000495560 436 ntBASIC7.07□□□□□ -1.28
RFX1P22670 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC7.07□□□□□ -1.28
RFX1P22670 AC006390.1-201ENST00000508068 283 ntBASIC7.07□□□□□ -1.28
RFX1P22670 AC018797.1-201ENST00000510791 255 ntBASIC7.07□□□□□ -1.28
RFX1P22670 snoU109.6-201ENST00000516831 118 ntBASIC7.07□□□□□ -1.28
RFX1P22670 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC7.07□□□□□ -1.28
RFX1P22670 TRIM51DP-201ENST00000529746 596 ntBASIC7.07□□□□□ -1.28
RFX1P22670 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC7.07□□□□□ -1.28
RFX1P22670 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC7.07□□□□□ -1.28
RFX1P22670 AC005519.1-201ENST00000554490 601 ntBASIC7.07□□□□□ -1.28
RFX1P22670 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC7.07□□□□□ -1.28
RFX1P22670 AC090616.5-202ENST00000582111 297 ntBASIC7.07□□□□□ -1.28
RFX1P22670 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC7.07□□□□□ -1.28
RFX1P22670 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC7.07□□□□□ -1.28
RFX1P22670 AC245052.7-201ENST00000601161 359 ntBASIC7.07□□□□□ -1.28
RFX1P22670 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC7.07□□□□□ -1.28
RFX1P22670 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC7.07□□□□□ -1.28
RFX1P22670 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC7.07□□□□□ -1.28
RFX1P22670 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC7.07□□□□□ -1.28
RFX1P22670 AP003122.6-201ENST00000623831 495 ntBASIC7.07□□□□□ -1.28
RFX1P22670 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC7.07□□□□□ -1.28
RFX1P22670 AC111152.1-202ENST00000635848 339 ntBASIC7.07□□□□□ -1.28
RFX1P22670 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
RFX1P22670 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC7.07□□□□□ -1.28
RFX1P22670 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RFX1P22670 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC7.07□□□□□ -1.28
RFX1P22670 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
RFX1P22670 AC026523.2-201ENST00000625039 7739 ntBASIC7.07□□□□□ -1.28
RFX1P22670 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC7.07□□□□□ -1.28
RFX1P22670 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
RFX1P22670 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC7.07□□□□□ -1.28
RFX1P22670 AC017104.4-201ENST00000636283 1592 ntBASIC7.07□□□□□ -1.28
RFX1P22670 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
RFX1P22670 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC7.07□□□□□ -1.28
RFX1P22670 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RFX1P22670 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RFX1P22670 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC7.06□□□□□ -1.28
RFX1P22670 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RFX1P22670 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC7.06□□□□□ -1.28
RFX1P22670 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC7.06□□□□□ -1.28
RFX1P22670 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RFX1P22670 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC7.06□□□□□ -1.28
RFX1P22670 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
RFX1P22670 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC7.06□□□□□ -1.28
RFX1P22670 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
RFX1P22670 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RFX1P22670 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
RFX1P22670 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
RFX1P22670 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC7.06□□□□□ -1.28
RFX1P22670 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC7.06□□□□□ -1.28
RFX1P22670 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
RFX1P22670 CBX3P1-201ENST00000325243 554 ntBASIC7.06□□□□□ -1.28
RFX1P22670 RNU1-85P-201ENST00000364127 164 ntBASIC7.06□□□□□ -1.28
RFX1P22670 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC7.06□□□□□ -1.28
RFX1P22670 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC7.06□□□□□ -1.28
RFX1P22670 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
RFX1P22670 ATP5A1P8-201ENST00000423669 1291 ntBASIC7.06□□□□□ -1.28
RFX1P22670 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC7.06□□□□□ -1.28
RFX1P22670 RPEP2-201ENST00000432149 701 ntBASIC7.06□□□□□ -1.28
RFX1P22670 RPL23AP74-201ENST00000437246 471 ntBASIC7.06□□□□□ -1.28
RFX1P22670 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC7.06□□□□□ -1.28
RFX1P22670 GAPDHP33-201ENST00000443168 1013 ntBASIC7.06□□□□□ -1.28
RFX1P22670 RPS26P56-201ENST00000444468 240 ntBASIC7.06□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms