Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC006326.1-201ENST00000445465 787 ntBASIC4.69□□□□□ -1.66
HLA-DPA1P20036 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.69□□□□□ -1.66
HLA-DPA1P20036 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.69□□□□□ -1.66
HLA-DPA1P20036 TPT1P1-201ENST00000458495 518 ntBASIC4.69□□□□□ -1.66
HLA-DPA1P20036 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.69□□□□□ -1.66
HLA-DPA1P20036 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.69□□□□□ -1.66
HLA-DPA1P20036 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.69□□□□□ -1.66
HLA-DPA1P20036 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.69□□□□□ -1.66
HLA-DPA1P20036 DEFB109D-201ENST00000529497 240 ntBASIC4.69□□□□□ -1.66
HLA-DPA1P20036 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.69□□□□□ -1.66
HLA-DPA1P20036 AL161713.1-201ENST00000555538 145 ntBASIC4.69□□□□□ -1.66
HLA-DPA1P20036 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.69□□□□□ -1.66
HLA-DPA1P20036 MIR4270-201ENST00000581799 70 ntBASIC4.69□□□□□ -1.66
HLA-DPA1P20036 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.69□□□□□ -1.66
HLA-DPA1P20036 AC003001.2-201ENST00000616294 831 ntBASIC4.69□□□□□ -1.66
HLA-DPA1P20036 AP000843.1-201ENST00000624880 701 ntBASIC4.69□□□□□ -1.66
HLA-DPA1P20036 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.69□□□□□ -1.66
HLA-DPA1P20036 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DPA1P20036 AC134882.1-201ENST00000603738 1676 ntBASIC4.69□□□□□ -1.66
HLA-DPA1P20036 AC135352.1-201ENST00000506173 1418 ntBASIC4.69□□□□□ -1.66
HLA-DPA1P20036 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.69□□□□□ -1.66
HLA-DPA1P20036 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.69□□□□□ -1.66
HLA-DPA1P20036 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DPA1P20036 AC015813.6-201ENST00000624409 5808 ntBASIC4.68□□□□□ -1.66
HLA-DPA1P20036 AC007529.1-201ENST00000418574 2178 ntBASIC4.68□□□□□ -1.66
HLA-DPA1P20036 AL355852.1-201ENST00000454081 1771 ntBASIC4.68□□□□□ -1.66
HLA-DPA1P20036 AC125257.1-201ENST00000560400 2930 ntBASIC4.68□□□□□ -1.66
HLA-DPA1P20036 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DPA1P20036 METTL21EP-201ENST00000298105 713 ntBASIC4.68□□□□□ -1.66
HLA-DPA1P20036 UBBP2-201ENST00000376781 231 ntBASIC4.68□□□□□ -1.66
HLA-DPA1P20036 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
HLA-DPA1P20036 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
HLA-DPA1P20036 MIR298-201ENST00000401212 88 ntBASIC4.68□□□□□ -1.66
HLA-DPA1P20036 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DPA1P20036 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.68□□□□□ -1.66
HLA-DPA1P20036 ATG4AP1-201ENST00000416893 538 ntBASIC4.68□□□□□ -1.66
HLA-DPA1P20036 MTND2P15-201ENST00000418575 892 ntBASIC4.68□□□□□ -1.66
HLA-DPA1P20036 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.68□□□□□ -1.66
HLA-DPA1P20036 ARL2BPP3-201ENST00000421226 480 ntBASIC4.68□□□□□ -1.66
HLA-DPA1P20036 Z74021.1-201ENST00000423610 407 ntBASIC4.68□□□□□ -1.66
HLA-DPA1P20036 BX119904.1-201ENST00000432026 348 ntBASIC4.68□□□□□ -1.66
HLA-DPA1P20036 AL513321.1-201ENST00000441175 761 ntBASIC4.68□□□□□ -1.66
HLA-DPA1P20036 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.68□□□□□ -1.66
HLA-DPA1P20036 AC092685.1-201ENST00000447960 1243 ntBASIC4.68□□□□□ -1.66
HLA-DPA1P20036 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.68□□□□□ -1.66
HLA-DPA1P20036 MTND2P6-201ENST00000455337 1030 ntBASIC4.68□□□□□ -1.66
HLA-DPA1P20036 RPL5P30-201ENST00000465511 891 ntBASIC4.68□□□□□ -1.66
HLA-DPA1P20036 AC006967.1-201ENST00000467608 589 ntBASIC4.68□□□□□ -1.66
HLA-DPA1P20036 OR52A4P-202ENST00000481634 799 ntBASIC4.68□□□□□ -1.66
HLA-DPA1P20036 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
HLA-DPA1P20036 CDH12P4-201ENST00000517835 295 ntBASIC4.68□□□□□ -1.66
HLA-DPA1P20036 CDH12P3-201ENST00000517935 295 ntBASIC4.68□□□□□ -1.66
HLA-DPA1P20036 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.68□□□□□ -1.66
HLA-DPA1P20036 CDH12P1-201ENST00000518435 295 ntBASIC4.68□□□□□ -1.66
HLA-DPA1P20036 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.68□□□□□ -1.66
HLA-DPA1P20036 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.68□□□□□ -1.66
HLA-DPA1P20036 AC093014.1-201ENST00000548926 724 ntBASIC4.68□□□□□ -1.66
HLA-DPA1P20036 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.68□□□□□ -1.66
HLA-DPA1P20036 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DPA1P20036 AC233266.2-201ENST00000567067 528 ntBASIC4.68□□□□□ -1.66
HLA-DPA1P20036 MIR4700-201ENST00000578311 74 ntBASIC4.68□□□□□ -1.66
HLA-DPA1P20036 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.68□□□□□ -1.66
HLA-DPA1P20036 AC040174.2-201ENST00000602701 465 ntBASIC4.68□□□□□ -1.66
HLA-DPA1P20036 AC135178.6-201ENST00000605314 398 ntBASIC4.68□□□□□ -1.66
HLA-DPA1P20036 AL161616.1-201ENST00000611867 286 ntBASIC4.68□□□□□ -1.66
HLA-DPA1P20036 AP001642.1-201ENST00000624727 2117 ntBASIC4.68□□□□□ -1.66
HLA-DPA1P20036 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DPA1P20036 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DPA1P20036 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DPA1P20036 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DPA1P20036 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DPA1P20036 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DPA1P20036 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HLA-DPA1P20036 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HLA-DPA1P20036 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.67□□□□□ -1.66
HLA-DPA1P20036 AC126323.6-202ENST00000568092 3511 ntBASIC4.67□□□□□ -1.66
HLA-DPA1P20036 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
HLA-DPA1P20036 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HLA-DPA1P20036 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC4.67□□□□□ -1.66
HLA-DPA1P20036 MAPK10-303ENST00000641324 3959 ntBASIC4.67□□□□□ -1.66
HLA-DPA1P20036 AL590240.1-201ENST00000334118 313 ntBASIC4.67□□□□□ -1.66
HLA-DPA1P20036 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HLA-DPA1P20036 SNORA71.2-201ENST00000364941 134 ntBASIC4.67□□□□□ -1.66
HLA-DPA1P20036 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
HLA-DPA1P20036 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
HLA-DPA1P20036 RPL21P43-201ENST00000425440 472 ntBASIC4.67□□□□□ -1.66
HLA-DPA1P20036 ACTR3P2-201ENST00000439585 1257 ntBASIC4.67□□□□□ -1.66
HLA-DPA1P20036 MTCYBP21-201ENST00000443300 1113 ntBASIC4.67□□□□□ -1.66
HLA-DPA1P20036 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.67□□□□□ -1.66
HLA-DPA1P20036 AC104763.1-201ENST00000475274 360 ntBASIC4.67□□□□□ -1.66
HLA-DPA1P20036 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.67□□□□□ -1.66
HLA-DPA1P20036 MTATP6P22-201ENST00000507369 598 ntBASIC4.67□□□□□ -1.66
HLA-DPA1P20036 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.67□□□□□ -1.66
HLA-DPA1P20036 AC103833.1-201ENST00000517442 172 ntBASIC4.67□□□□□ -1.66
HLA-DPA1P20036 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.67□□□□□ -1.66
HLA-DPA1P20036 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.67□□□□□ -1.66
HLA-DPA1P20036 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.67□□□□□ -1.66
HLA-DPA1P20036 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.67□□□□□ -1.66
HLA-DPA1P20036 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.67□□□□□ -1.66
HLA-DPA1P20036 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms