Protein–RNA interactions for Protein: P12814

ACTN1, Alpha-actinin-1, humanhuman

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1P12814 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
ACTN1P12814 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
ACTN1P12814 VPS35P1-201ENST00000563400 1518 ntBASIC5.22□□□□□ -1.57
ACTN1P12814 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
ACTN1P12814 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
ACTN1P12814 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
ACTN1P12814 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
ACTN1P12814 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.21□□□□□ -1.58
ACTN1P12814 UBBP2-201ENST00000376781 231 ntBASIC5.21□□□□□ -1.58
ACTN1P12814 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
ACTN1P12814 MIR23A-201ENST00000385245 73 ntBASIC5.21□□□□□ -1.58
ACTN1P12814 OR6C69P-201ENST00000394268 893 ntBASIC5.21□□□□□ -1.58
ACTN1P12814 ATP5F1P6-201ENST00000402768 767 ntBASIC5.21□□□□□ -1.58
ACTN1P12814 RPL5P19-201ENST00000404228 893 ntBASIC5.21□□□□□ -1.58
ACTN1P12814 ARL4AP5-201ENST00000404372 599 ntBASIC5.21□□□□□ -1.58
ACTN1P12814 LINC00993-201ENST00000420453 540 ntBASIC5.21□□□□□ -1.58
ACTN1P12814 RPS27AP12-201ENST00000429552 465 ntBASIC5.21□□□□□ -1.58
ACTN1P12814 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.21□□□□□ -1.58
ACTN1P12814 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.21□□□□□ -1.58
ACTN1P12814 TDGF1P1-201ENST00000445734 527 ntBASIC5.21□□□□□ -1.58
ACTN1P12814 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.21□□□□□ -1.58
ACTN1P12814 EIF2S2P5-201ENST00000457635 968 ntBASIC5.21□□□□□ -1.58
ACTN1P12814 AC021205.1-201ENST00000468797 348 ntBASIC5.21□□□□□ -1.58
ACTN1P12814 AC107398.1-201ENST00000486904 505 ntBASIC5.21□□□□□ -1.58
ACTN1P12814 AC020890.1-201ENST00000491837 504 ntBASIC5.21□□□□□ -1.58
ACTN1P12814 AC007016.1-201ENST00000512110 244 ntBASIC5.21□□□□□ -1.58
ACTN1P12814 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.21□□□□□ -1.58
ACTN1P12814 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.21□□□□□ -1.58
ACTN1P12814 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.21□□□□□ -1.58
ACTN1P12814 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
ACTN1P12814 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC5.21□□□□□ -1.58
ACTN1P12814 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC5.21□□□□□ -1.58
ACTN1P12814 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5.21□□□□□ -1.58
ACTN1P12814 SETP1-201ENST00000556014 845 ntBASIC5.21□□□□□ -1.58
ACTN1P12814 SULT1C2P2-201ENST00000562517 294 ntBASIC5.21□□□□□ -1.58
ACTN1P12814 AC084783.1-201ENST00000565846 910 ntBASIC5.21□□□□□ -1.58
ACTN1P12814 MIR5699-201ENST00000578903 90 ntBASIC5.21□□□□□ -1.58
ACTN1P12814 CBX3P2-202ENST00000583365 535 ntBASIC5.21□□□□□ -1.58
ACTN1P12814 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.21□□□□□ -1.58
ACTN1P12814 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
ACTN1P12814 MIR8069-1-201ENST00000616627 86 ntBASIC5.21□□□□□ -1.58
ACTN1P12814 MIR8069-2-201ENST00000621412 86 ntBASIC5.21□□□□□ -1.58
ACTN1P12814 AC095038.2-201ENST00000621464 1070 ntBASIC5.21□□□□□ -1.58
ACTN1P12814 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.21□□□□□ -1.58
ACTN1P12814 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
ACTN1P12814 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.21□□□□□ -1.58
ACTN1P12814 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
ACTN1P12814 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
ACTN1P12814 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.21□□□□□ -1.58
ACTN1P12814 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
ACTN1P12814 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ACTN1P12814 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
ACTN1P12814 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
ACTN1P12814 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ACTN1P12814 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.2□□□□□ -1.58
ACTN1P12814 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
ACTN1P12814 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ACTN1P12814 OR4K17-201ENST00000315543 1032 ntBASIC5.2□□□□□ -1.58
ACTN1P12814 SNORA48.7-201ENST00000391302 135 ntBASIC5.2□□□□□ -1.58
ACTN1P12814 TAF9BP2-201ENST00000400856 499 ntBASIC5.2□□□□□ -1.58
ACTN1P12814 AL591848.1-201ENST00000413092 322 ntBASIC5.2□□□□□ -1.58
ACTN1P12814 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.2□□□□□ -1.58
ACTN1P12814 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.2□□□□□ -1.58
ACTN1P12814 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.2□□□□□ -1.58
ACTN1P12814 AC022022.1-201ENST00000430304 178 ntBASIC5.2□□□□□ -1.58
ACTN1P12814 RPS17P8-201ENST00000434525 335 ntBASIC5.2□□□□□ -1.58
ACTN1P12814 AL512661.1-201ENST00000434586 1253 ntBASIC5.2□□□□□ -1.58
ACTN1P12814 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.2□□□□□ -1.58
ACTN1P12814 CACYBPP1-201ENST00000438592 684 ntBASIC5.2□□□□□ -1.58
ACTN1P12814 AL450263.2-201ENST00000439400 589 ntBASIC5.2□□□□□ -1.58
ACTN1P12814 CDC27P1-201ENST00000445384 715 ntBASIC5.2□□□□□ -1.58
ACTN1P12814 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.2□□□□□ -1.58
ACTN1P12814 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ACTN1P12814 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC5.2□□□□□ -1.58
ACTN1P12814 AL133244.1-201ENST00000456007 258 ntBASIC5.2□□□□□ -1.58
ACTN1P12814 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
ACTN1P12814 TPT1P1-201ENST00000458495 518 ntBASIC5.2□□□□□ -1.58
ACTN1P12814 NPM1P29-201ENST00000483112 803 ntBASIC5.2□□□□□ -1.58
ACTN1P12814 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.2□□□□□ -1.58
ACTN1P12814 AC091868.1-201ENST00000508746 304 ntBASIC5.2□□□□□ -1.58
ACTN1P12814 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
ACTN1P12814 HMGN1P15-201ENST00000513870 295 ntBASIC5.2□□□□□ -1.58
ACTN1P12814 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.2□□□□□ -1.58
ACTN1P12814 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC5.2□□□□□ -1.58
ACTN1P12814 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC5.2□□□□□ -1.58
ACTN1P12814 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC5.2□□□□□ -1.58
ACTN1P12814 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
ACTN1P12814 AC008782.1-201ENST00000603386 430 ntBASIC5.2□□□□□ -1.58
ACTN1P12814 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.2□□□□□ -1.58
ACTN1P12814 AC004232.3-201ENST00000622977 525 ntBASIC5.2□□□□□ -1.58
ACTN1P12814 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ACTN1P12814 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.2□□□□□ -1.58
ACTN1P12814 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.2□□□□□ -1.58
ACTN1P12814 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.2□□□□□ -1.58
ACTN1P12814 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
ACTN1P12814 TLK1P1-201ENST00000456760 2440 ntBASIC5.19□□□□□ -1.58
ACTN1P12814 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
ACTN1P12814 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
ACTN1P12814 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.19□□□□□ -1.58
ACTN1P12814 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms