Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.23□□□□□ -1.89
CXCL1P09341 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.23□□□□□ -1.89
CXCL1P09341 VN1R40P-201ENST00000455196 941 ntBASIC3.23□□□□□ -1.89
CXCL1P09341 SETP20-201ENST00000457046 852 ntBASIC3.23□□□□□ -1.89
CXCL1P09341 AC004801.2-202ENST00000463559 283 ntBASIC3.23□□□□□ -1.89
CXCL1P09341 AC007537.2-201ENST00000472093 511 ntBASIC3.23□□□□□ -1.89
CXCL1P09341 RN7SL174P-201ENST00000475578 289 ntBASIC3.23□□□□□ -1.89
CXCL1P09341 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.23□□□□□ -1.89
CXCL1P09341 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC3.23□□□□□ -1.89
CXCL1P09341 BTF3P13-201ENST00000513224 490 ntBASIC3.23□□□□□ -1.89
CXCL1P09341 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.23□□□□□ -1.89
CXCL1P09341 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
CXCL1P09341 IGHVIII-67-4-201ENST00000524281 296 ntBASIC3.23□□□□□ -1.89
CXCL1P09341 OSBPL9P2-201ENST00000526582 1228 ntBASIC3.23□□□□□ -1.89
CXCL1P09341 AP001880.2-201ENST00000538233 448 ntBASIC3.23□□□□□ -1.89
CXCL1P09341 HAUS8P1-201ENST00000549005 542 ntBASIC3.23□□□□□ -1.89
CXCL1P09341 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC3.23□□□□□ -1.89
CXCL1P09341 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC3.23□□□□□ -1.89
CXCL1P09341 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC3.23□□□□□ -1.89
CXCL1P09341 AC084757.1-201ENST00000559987 490 ntBASIC3.23□□□□□ -1.89
CXCL1P09341 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC3.23□□□□□ -1.89
CXCL1P09341 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC3.23□□□□□ -1.89
CXCL1P09341 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC3.23□□□□□ -1.89
CXCL1P09341 SUMO2P15-201ENST00000604285 278 ntBASIC3.23□□□□□ -1.89
CXCL1P09341 ELOCP34-201ENST00000604436 327 ntBASIC3.23□□□□□ -1.89
CXCL1P09341 MIR6891-201ENST00000618788 93 ntBASIC3.23□□□□□ -1.89
CXCL1P09341 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC3.23□□□□□ -1.89
CXCL1P09341 LINC01808-202ENST00000641680 1116 ntBASIC3.23□□□□□ -1.89
CXCL1P09341 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.23□□□□□ -1.89
CXCL1P09341 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CXCL1P09341 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.23□□□□□ -1.89
CXCL1P09341 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
CXCL1P09341 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.23□□□□□ -1.89
CXCL1P09341 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
CXCL1P09341 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
CXCL1P09341 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
CXCL1P09341 AC009229.4-201ENST00000623854 1947 ntBASIC3.23□□□□□ -1.89
CXCL1P09341 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CXCL1P09341 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
CXCL1P09341 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CXCL1P09341 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CXCL1P09341 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CXCL1P09341 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CXCL1P09341 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.22□□□□□ -1.89
CXCL1P09341 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC3.22□□□□□ -1.89
CXCL1P09341 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CXCL1P09341 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
CXCL1P09341 METTL5-202ENST00000308099 629 ntTSL 3 BASIC3.22□□□□□ -1.89
CXCL1P09341 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
CXCL1P09341 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
CXCL1P09341 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC3.22□□□□□ -1.89
CXCL1P09341 MIR765-201ENST00000390226 114 ntBASIC3.22□□□□□ -1.89
CXCL1P09341 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC3.22□□□□□ -1.89
CXCL1P09341 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CXCL1P09341 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC3.22□□□□□ -1.89
CXCL1P09341 AC019050.1-201ENST00000418508 492 ntBASIC3.22□□□□□ -1.89
CXCL1P09341 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC3.22□□□□□ -1.89
CXCL1P09341 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CXCL1P09341 EIF1P3-201ENST00000423841 334 ntBASIC3.22□□□□□ -1.89
CXCL1P09341 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CXCL1P09341 AL359265.2-201ENST00000434367 631 ntBASIC3.22□□□□□ -1.89
CXCL1P09341 AC005154.2-201ENST00000438110 379 ntBASIC3.22□□□□□ -1.89
CXCL1P09341 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CXCL1P09341 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC3.22□□□□□ -1.89
CXCL1P09341 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CXCL1P09341 SUMO2P1-206ENST00000445436 284 ntBASIC3.22□□□□□ -1.89
CXCL1P09341 RPL7P48-201ENST00000461513 746 ntBASIC3.22□□□□□ -1.89
CXCL1P09341 AC104164.2-201ENST00000496953 495 ntBASIC3.22□□□□□ -1.89
CXCL1P09341 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.22□□□□□ -1.89
CXCL1P09341 RN7SKP276-201ENST00000516242 268 ntBASIC3.22□□□□□ -1.89
CXCL1P09341 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC3.22□□□□□ -1.89
CXCL1P09341 IGKV1-32-201ENST00000519290 311 ntBASIC3.22□□□□□ -1.89
CXCL1P09341 AP000827.1-201ENST00000527814 258 ntBASIC3.22□□□□□ -1.89
CXCL1P09341 OR5M2P-201ENST00000529003 936 ntBASIC3.22□□□□□ -1.89
CXCL1P09341 AC021006.3-201ENST00000530771 192 ntBASIC3.22□□□□□ -1.89
CXCL1P09341 AL133457.1-201ENST00000564251 987 ntBASIC3.22□□□□□ -1.89
CXCL1P09341 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CXCL1P09341 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC3.22□□□□□ -1.89
CXCL1P09341 MIR3667-201ENST00000581025 74 ntBASIC3.22□□□□□ -1.89
CXCL1P09341 MIR3176-201ENST00000582210 90 ntBASIC3.22□□□□□ -1.89
CXCL1P09341 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CXCL1P09341 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC3.22□□□□□ -1.89
CXCL1P09341 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CXCL1P09341 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CXCL1P09341 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.22□□□□□ -1.89
CXCL1P09341 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.22□□□□□ -1.89
CXCL1P09341 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CXCL1P09341 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.22□□□□□ -1.89
CXCL1P09341 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC3.22□□□□□ -1.89
CXCL1P09341 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.22□□□□□ -1.89
CXCL1P09341 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.22□□□□□ -1.89
CXCL1P09341 MAPK10-372ENST00000641954 3413 ntBASIC3.22□□□□□ -1.89
CXCL1P09341 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.22□□□□□ -1.89
CXCL1P09341 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CXCL1P09341 AC114546.3-201ENST00000623582 1734 ntBASIC3.22□□□□□ -1.89
CXCL1P09341 SPATA2P1-201ENST00000431223 2055 ntBASIC3.21□□□□□ -1.89
CXCL1P09341 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
CXCL1P09341 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CXCL1P09341 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CXCL1P09341 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms