Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
MMP3P08254 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
MMP3P08254 AC008126.1-201ENST00000549019 480 ntBASIC5.15□□□□□ -1.59
MMP3P08254 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5.15□□□□□ -1.59
MMP3P08254 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
MMP3P08254 MIR4509-3-201ENST00000578671 94 ntBASIC5.15□□□□□ -1.59
MMP3P08254 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC5.15□□□□□ -1.59
MMP3P08254 AC069366.1-201ENST00000583159 838 ntBASIC5.15□□□□□ -1.59
MMP3P08254 MIR4509-2-201ENST00000583920 94 ntBASIC5.15□□□□□ -1.59
MMP3P08254 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
MMP3P08254 AC103792.1-201ENST00000603591 919 ntBASIC5.15□□□□□ -1.59
MMP3P08254 AC006363.1-201ENST00000603806 463 ntBASIC5.15□□□□□ -1.59
MMP3P08254 AL445435.1-201ENST00000604232 665 ntBASIC5.15□□□□□ -1.59
MMP3P08254 AC099785.1-201ENST00000605697 437 ntBASIC5.15□□□□□ -1.59
MMP3P08254 RMST_10.1-201ENST00000616309 154 ntBASIC5.15□□□□□ -1.59
MMP3P08254 MIR4509-1-201ENST00000618224 94 ntBASIC5.15□□□□□ -1.59
MMP3P08254 AC068787.1-201ENST00000623908 691 ntBASIC5.15□□□□□ -1.59
MMP3P08254 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC5.15□□□□□ -1.59
MMP3P08254 AC068724.3-201ENST00000625906 87 ntBASIC5.15□□□□□ -1.59
MMP3P08254 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC5.15□□□□□ -1.59
MMP3P08254 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC5.15□□□□□ -1.59
MMP3P08254 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.15□□□□□ -1.59
MMP3P08254 MTND5P11-201ENST00000511037 1812 ntBASIC5.15□□□□□ -1.59
MMP3P08254 AC015813.6-201ENST00000624409 5808 ntBASIC5.15□□□□□ -1.59
MMP3P08254 AL136164.3-201ENST00000624429 3978 ntBASIC5.15□□□□□ -1.59
MMP3P08254 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
MMP3P08254 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.15□□□□□ -1.59
MMP3P08254 ADAM5-202ENST00000399789 1942 ntBASIC5.15□□□□□ -1.59
MMP3P08254 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
MMP3P08254 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.15□□□□□ -1.59
MMP3P08254 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.14□□□□□ -1.59
MMP3P08254 AC135352.1-201ENST00000506173 1418 ntBASIC5.14□□□□□ -1.59
MMP3P08254 AL022311.1-201ENST00000623726 19416 ntBASIC5.14□□□□□ -1.59
MMP3P08254 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
MMP3P08254 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
MMP3P08254 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
MMP3P08254 AL034370.1-201ENST00000397254 1590 ntBASIC5.14□□□□□ -1.59
MMP3P08254 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
MMP3P08254 RNU5B-4P-201ENST00000363508 111 ntBASIC5.14□□□□□ -1.59
MMP3P08254 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
MMP3P08254 RNU6-207P-201ENST00000384137 107 ntBASIC5.14□□□□□ -1.59
MMP3P08254 RNU6-298P-201ENST00000390888 96 ntBASIC5.14□□□□□ -1.59
MMP3P08254 RNA5SP105-201ENST00000391123 113 ntBASIC5.14□□□□□ -1.59
MMP3P08254 RPL21P108-201ENST00000413857 481 ntBASIC5.14□□□□□ -1.59
MMP3P08254 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC5.14□□□□□ -1.59
MMP3P08254 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.14□□□□□ -1.59
MMP3P08254 AC009506.2-201ENST00000420635 840 ntBASIC5.14□□□□□ -1.59
MMP3P08254 AC012519.1-201ENST00000424588 610 ntBASIC5.14□□□□□ -1.59
MMP3P08254 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.14□□□□□ -1.59
MMP3P08254 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.14□□□□□ -1.59
MMP3P08254 AC093716.1-201ENST00000435923 377 ntBASIC5.14□□□□□ -1.59
MMP3P08254 RPL23AP93-201ENST00000440847 484 ntBASIC5.14□□□□□ -1.59
MMP3P08254 RPS27P5-201ENST00000444247 244 ntBASIC5.14□□□□□ -1.59
MMP3P08254 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC5.14□□□□□ -1.59
MMP3P08254 HMGB1P5-202ENST00000451497 985 ntBASIC5.14□□□□□ -1.59
MMP3P08254 RN7SL41P-201ENST00000476144 297 ntBASIC5.14□□□□□ -1.59
MMP3P08254 OR11I1P-201ENST00000486033 954 ntBASIC5.14□□□□□ -1.59
MMP3P08254 AC098799.3-201ENST00000506095 438 ntBASIC5.14□□□□□ -1.59
MMP3P08254 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC5.14□□□□□ -1.59
MMP3P08254 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
MMP3P08254 AP000827.1-201ENST00000527814 258 ntBASIC5.14□□□□□ -1.59
MMP3P08254 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.14□□□□□ -1.59
MMP3P08254 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC5.14□□□□□ -1.59
MMP3P08254 AC127024.5-201ENST00000580085 462 ntBASIC5.14□□□□□ -1.59
MMP3P08254 MIR3939-201ENST00000582614 106 ntBASIC5.14□□□□□ -1.59
MMP3P08254 AC012254.4-201ENST00000588843 273 ntBASIC5.14□□□□□ -1.59
MMP3P08254 AL606834.3-201ENST00000602615 496 ntBASIC5.14□□□□□ -1.59
MMP3P08254 SUMO2P14-201ENST00000604488 293 ntBASIC5.14□□□□□ -1.59
MMP3P08254 VN1R9P-201ENST00000614184 867 ntBASIC5.14□□□□□ -1.59
MMP3P08254 OR8G7P-201ENST00000616658 848 ntBASIC5.14□□□□□ -1.59
MMP3P08254 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC5.14□□□□□ -1.59
MMP3P08254 RPL23AP61-201ENST00000623642 466 ntBASIC5.14□□□□□ -1.59
MMP3P08254 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
MMP3P08254 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.14□□□□□ -1.59
MMP3P08254 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
MMP3P08254 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
MMP3P08254 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.14□□□□□ -1.59
MMP3P08254 AC109446.4-201ENST00000623235 2755 ntBASIC5.14□□□□□ -1.59
MMP3P08254 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
MMP3P08254 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.14□□□□□ -1.59
MMP3P08254 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
MMP3P08254 AC005005.4-201ENST00000623789 16698 ntBASIC5.13□□□□□ -1.59
MMP3P08254 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.13□□□□□ -1.59
MMP3P08254 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.13□□□□□ -1.59
MMP3P08254 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.13□□□□□ -1.59
MMP3P08254 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
MMP3P08254 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
MMP3P08254 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
MMP3P08254 OR6C69P-201ENST00000394268 893 ntBASIC5.13□□□□□ -1.59
MMP3P08254 RN7SKP27-201ENST00000410684 333 ntBASIC5.13□□□□□ -1.59
MMP3P08254 AC010385.1-201ENST00000412374 256 ntBASIC5.13□□□□□ -1.59
MMP3P08254 AL590806.1-201ENST00000415818 853 ntBASIC5.13□□□□□ -1.59
MMP3P08254 PTP4A1P7-201ENST00000423476 514 ntBASIC5.13□□□□□ -1.59
MMP3P08254 PNRC2P1-201ENST00000423940 420 ntBASIC5.13□□□□□ -1.59
MMP3P08254 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.13□□□□□ -1.59
MMP3P08254 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.13□□□□□ -1.59
MMP3P08254 AL138787.1-202ENST00000437804 898 ntBASIC5.13□□□□□ -1.59
MMP3P08254 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC5.13□□□□□ -1.59
MMP3P08254 AC044797.1-201ENST00000445744 679 ntBASIC5.13□□□□□ -1.59
MMP3P08254 AC069540.1-201ENST00000446320 988 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms