Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 MRPL50P1-201ENST00000431951 384 ntBASIC4.14□□□□□ -1.75
HLA-DQB2P05538 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.14□□□□□ -1.75
HLA-DQB2P05538 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.14□□□□□ -1.75
HLA-DQB2P05538 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HLA-DQB2P05538 RPL10P17-201ENST00000453852 316 ntBASIC4.14□□□□□ -1.75
HLA-DQB2P05538 RPL38P1-201ENST00000460914 211 ntBASIC4.14□□□□□ -1.75
HLA-DQB2P05538 CEACAMP10-202ENST00000495431 496 ntBASIC4.14□□□□□ -1.75
HLA-DQB2P05538 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC4.14□□□□□ -1.75
HLA-DQB2P05538 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.14□□□□□ -1.75
HLA-DQB2P05538 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.14□□□□□ -1.75
HLA-DQB2P05538 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.14□□□□□ -1.75
HLA-DQB2P05538 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.14□□□□□ -1.75
HLA-DQB2P05538 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HLA-DQB2P05538 AC010547.7-201ENST00000570323 333 ntBASIC4.14□□□□□ -1.75
HLA-DQB2P05538 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.14□□□□□ -1.75
HLA-DQB2P05538 AC009237.17-201ENST00000618111 748 ntBASIC4.14□□□□□ -1.75
HLA-DQB2P05538 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC4.14□□□□□ -1.75
HLA-DQB2P05538 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.14□□□□□ -1.75
HLA-DQB2P05538 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HLA-DQB2P05538 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.14□□□□□ -1.75
HLA-DQB2P05538 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.14□□□□□ -1.75
HLA-DQB2P05538 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
HLA-DQB2P05538 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HLA-DQB2P05538 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
HLA-DQB2P05538 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
HLA-DQB2P05538 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.13□□□□□ -1.75
HLA-DQB2P05538 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HLA-DQB2P05538 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HLA-DQB2P05538 AL121657.1-201ENST00000327215 531 ntBASIC4.13□□□□□ -1.75
HLA-DQB2P05538 RNA5SP130-201ENST00000364431 114 ntBASIC4.13□□□□□ -1.75
HLA-DQB2P05538 SNORA62-201ENST00000365493 153 ntBASIC4.13□□□□□ -1.75
HLA-DQB2P05538 RHOT1P2-201ENST00000366423 333 ntBASIC4.13□□□□□ -1.75
HLA-DQB2P05538 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HLA-DQB2P05538 AC007068.1-201ENST00000396690 844 ntBASIC4.13□□□□□ -1.75
HLA-DQB2P05538 AL049693.1-201ENST00000402760 611 ntBASIC4.13□□□□□ -1.75
HLA-DQB2P05538 AL034379.1-201ENST00000423216 253 ntBASIC4.13□□□□□ -1.75
HLA-DQB2P05538 GTF2IP2-201ENST00000424290 697 ntBASIC4.13□□□□□ -1.75
HLA-DQB2P05538 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.13□□□□□ -1.75
HLA-DQB2P05538 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.13□□□□□ -1.75
HLA-DQB2P05538 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.13□□□□□ -1.75
HLA-DQB2P05538 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.13□□□□□ -1.75
HLA-DQB2P05538 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.13□□□□□ -1.75
HLA-DQB2P05538 RPL7P19-201ENST00000469948 618 ntBASIC4.13□□□□□ -1.75
HLA-DQB2P05538 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.13□□□□□ -1.75
HLA-DQB2P05538 RNA5SP154-201ENST00000516193 111 ntBASIC4.13□□□□□ -1.75
HLA-DQB2P05538 IGKV2-38-201ENST00000517443 247 ntBASIC4.13□□□□□ -1.75
HLA-DQB2P05538 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.13□□□□□ -1.75
HLA-DQB2P05538 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.13□□□□□ -1.75
HLA-DQB2P05538 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.13□□□□□ -1.75
HLA-DQB2P05538 AC025627.2-201ENST00000576220 160 ntBASIC4.13□□□□□ -1.75
HLA-DQB2P05538 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.13□□□□□ -1.75
HLA-DQB2P05538 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC4.13□□□□□ -1.75
HLA-DQB2P05538 ELOCP28-201ENST00000590044 317 ntBASIC4.13□□□□□ -1.75
HLA-DQB2P05538 AC104662.1-201ENST00000604448 511 ntBASIC4.13□□□□□ -1.75
HLA-DQB2P05538 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.13□□□□□ -1.75
HLA-DQB2P05538 AC006338.2-201ENST00000616864 791 ntBASIC4.13□□□□□ -1.75
HLA-DQB2P05538 AC090506.2-201ENST00000624521 419 ntBASIC4.13□□□□□ -1.75
HLA-DQB2P05538 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HLA-DQB2P05538 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HLA-DQB2P05538 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.13□□□□□ -1.75
HLA-DQB2P05538 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HLA-DQB2P05538 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HLA-DQB2P05538 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
HLA-DQB2P05538 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
HLA-DQB2P05538 AC092111.2-201ENST00000611627 1414 ntBASIC4.12□□□□□ -1.75
HLA-DQB2P05538 AP000756.2-201ENST00000624168 2567 ntBASIC4.12□□□□□ -1.75
HLA-DQB2P05538 USP9YP4-201ENST00000424401 1745 ntBASIC4.12□□□□□ -1.75
HLA-DQB2P05538 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
HLA-DQB2P05538 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.12□□□□□ -1.75
HLA-DQB2P05538 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HLA-DQB2P05538 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
HLA-DQB2P05538 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HLA-DQB2P05538 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
HLA-DQB2P05538 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HLA-DQB2P05538 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HLA-DQB2P05538 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HLA-DQB2P05538 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.12□□□□□ -1.75
HLA-DQB2P05538 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HLA-DQB2P05538 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HLA-DQB2P05538 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
HLA-DQB2P05538 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
HLA-DQB2P05538 AC108032.1-201ENST00000416706 207 ntBASIC4.12□□□□□ -1.75
HLA-DQB2P05538 OR2X1P-201ENST00000421144 687 ntBASIC4.12□□□□□ -1.75
HLA-DQB2P05538 OR5BE1P-201ENST00000425977 939 ntBASIC4.12□□□□□ -1.75
HLA-DQB2P05538 ELOCP18-201ENST00000434209 337 ntBASIC4.12□□□□□ -1.75
HLA-DQB2P05538 ELOCP8-201ENST00000439309 332 ntBASIC4.12□□□□□ -1.75
HLA-DQB2P05538 ELOCP15-201ENST00000442090 332 ntBASIC4.12□□□□□ -1.75
HLA-DQB2P05538 AC104849.1-201ENST00000462623 405 ntBASIC4.12□□□□□ -1.75
HLA-DQB2P05538 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.12□□□□□ -1.75
HLA-DQB2P05538 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.12□□□□□ -1.75
HLA-DQB2P05538 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.12□□□□□ -1.75
HLA-DQB2P05538 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.12□□□□□ -1.75
HLA-DQB2P05538 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HLA-DQB2P05538 AC068020.1-201ENST00000594215 661 ntBASIC4.12□□□□□ -1.75
HLA-DQB2P05538 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
HLA-DQB2P05538 AL590392.1-201ENST00000604960 446 ntBASIC4.12□□□□□ -1.75
HLA-DQB2P05538 AL591034.3-201ENST00000605511 685 ntBASIC4.12□□□□□ -1.75
HLA-DQB2P05538 AL008729.2-201ENST00000606393 473 ntBASIC4.12□□□□□ -1.75
HLA-DQB2P05538 AC010809.3-201ENST00000621310 641 ntBASIC4.12□□□□□ -1.75
HLA-DQB2P05538 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms