Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HLA-DPB1P04440 RNU6-751P-201ENST00000516382 101 ntBASIC3.83□□□□□ -1.8
HLA-DPB1P04440 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.83□□□□□ -1.8
HLA-DPB1P04440 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC3.83□□□□□ -1.8
HLA-DPB1P04440 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.83□□□□□ -1.8
HLA-DPB1P04440 MEG8-217ENST00000556637 924 ntTSL 5 BASIC3.83□□□□□ -1.8
HLA-DPB1P04440 AC009268.1-201ENST00000561352 1203 ntBASIC3.83□□□□□ -1.8
HLA-DPB1P04440 AL360157.1-201ENST00000565962 87 ntBASIC3.83□□□□□ -1.8
HLA-DPB1P04440 MIR4675-201ENST00000577898 77 ntBASIC3.83□□□□□ -1.8
HLA-DPB1P04440 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC3.83□□□□□ -1.8
HLA-DPB1P04440 AC093765.1-201ENST00000603758 881 ntBASIC3.83□□□□□ -1.8
HLA-DPB1P04440 AC007620.3-201ENST00000608131 497 ntBASIC3.83□□□□□ -1.8
HLA-DPB1P04440 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.83□□□□□ -1.8
HLA-DPB1P04440 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC3.83□□□□□ -1.8
HLA-DPB1P04440 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.83□□□□□ -1.8
HLA-DPB1P04440 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.83□□□□□ -1.8
HLA-DPB1P04440 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.83□□□□□ -1.8
HLA-DPB1P04440 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
HLA-DPB1P04440 HSPA8P17-201ENST00000427029 1382 ntBASIC3.83□□□□□ -1.8
HLA-DPB1P04440 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.83□□□□□ -1.8
HLA-DPB1P04440 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.83□□□□□ -1.8
HLA-DPB1P04440 AC053481.2-202ENST00000582394 1500 ntBASIC3.83□□□□□ -1.8
HLA-DPB1P04440 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
HLA-DPB1P04440 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
HLA-DPB1P04440 NOL8P1-201ENST00000508336 3529 ntBASIC3.82□□□□□ -1.8
HLA-DPB1P04440 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.82□□□□□ -1.8
HLA-DPB1P04440 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC3.82□□□□□ -1.8
HLA-DPB1P04440 RAD17P1-201ENST00000418130 2042 ntBASIC3.82□□□□□ -1.8
HLA-DPB1P04440 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DPB1P04440 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DPB1P04440 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC3.82□□□□□ -1.8
HLA-DPB1P04440 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DPB1P04440 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.82□□□□□ -1.8
HLA-DPB1P04440 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DPB1P04440 AC017007.4-201ENST00000503353 1352 ntBASIC3.82□□□□□ -1.8
HLA-DPB1P04440 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DPB1P04440 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DPB1P04440 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.82□□□□□ -1.8
HLA-DPB1P04440 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DPB1P04440 MIR192-201ENST00000384915 110 ntBASIC3.82□□□□□ -1.8
HLA-DPB1P04440 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
HLA-DPB1P04440 AC104297.1-201ENST00000393779 870 ntBASIC3.82□□□□□ -1.8
HLA-DPB1P04440 SNORA3C-201ENST00000408792 125 ntBASIC3.82□□□□□ -1.8
HLA-DPB1P04440 AC016769.2-201ENST00000414815 475 ntBASIC3.82□□□□□ -1.8
HLA-DPB1P04440 RPL26P29-201ENST00000415623 438 ntBASIC3.82□□□□□ -1.8
HLA-DPB1P04440 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DPB1P04440 MTCYBP7-201ENST00000419540 1134 ntBASIC3.82□□□□□ -1.8
HLA-DPB1P04440 EIF1P3-201ENST00000423841 334 ntBASIC3.82□□□□□ -1.8
HLA-DPB1P04440 MTCO1P45-201ENST00000431457 267 ntBASIC3.82□□□□□ -1.8
HLA-DPB1P04440 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC3.82□□□□□ -1.8
HLA-DPB1P04440 TPTE2P3-201ENST00000441562 1189 ntBASIC3.82□□□□□ -1.8
HLA-DPB1P04440 HMGB1P16-201ENST00000447155 540 ntBASIC3.82□□□□□ -1.8
HLA-DPB1P04440 MTND2P25-201ENST00000449028 610 ntBASIC3.82□□□□□ -1.8
HLA-DPB1P04440 RAD23BP3-201ENST00000454157 1152 ntBASIC3.82□□□□□ -1.8
HLA-DPB1P04440 AC069277.2-201ENST00000454211 432 ntBASIC3.82□□□□□ -1.8
HLA-DPB1P04440 AL133477.1-201ENST00000457472 514 ntBASIC3.82□□□□□ -1.8
HLA-DPB1P04440 MTND2P28-201ENST00000457540 1044 ntBASIC3.82□□□□□ -1.8
HLA-DPB1P04440 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.82□□□□□ -1.8
HLA-DPB1P04440 PPM1AP1-201ENST00000502740 1135 ntBASIC3.82□□□□□ -1.8
HLA-DPB1P04440 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DPB1P04440 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.82□□□□□ -1.8
HLA-DPB1P04440 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.82□□□□□ -1.8
HLA-DPB1P04440 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC3.82□□□□□ -1.8
HLA-DPB1P04440 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC3.82□□□□□ -1.8
HLA-DPB1P04440 AC022784.5-201ENST00000522241 437 ntBASIC3.82□□□□□ -1.8
HLA-DPB1P04440 AC090281.1-201ENST00000523019 276 ntBASIC3.82□□□□□ -1.8
HLA-DPB1P04440 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.82□□□□□ -1.8
HLA-DPB1P04440 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC3.82□□□□□ -1.8
HLA-DPB1P04440 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.82□□□□□ -1.8
HLA-DPB1P04440 AC084783.1-201ENST00000565846 910 ntBASIC3.82□□□□□ -1.8
HLA-DPB1P04440 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC3.82□□□□□ -1.8
HLA-DPB1P04440 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC3.82□□□□□ -1.8
HLA-DPB1P04440 SNX6P1-201ENST00000601728 1224 ntBASIC3.82□□□□□ -1.8
HLA-DPB1P04440 AP005019.3-201ENST00000620418 560 ntBASIC3.82□□□□□ -1.8
HLA-DPB1P04440 AL359715.5-201ENST00000623431 443 ntBASIC3.82□□□□□ -1.8
HLA-DPB1P04440 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC3.82□□□□□ -1.8
HLA-DPB1P04440 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DPB1P04440 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DPB1P04440 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
HLA-DPB1P04440 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.82□□□□□ -1.8
HLA-DPB1P04440 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
HLA-DPB1P04440 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.82□□□□□ -1.8
HLA-DPB1P04440 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DPB1P04440 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DPB1P04440 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC3.82□□□□□ -1.8
HLA-DPB1P04440 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DPB1P04440 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HLA-DPB1P04440 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.81□□□□□ -1.8
HLA-DPB1P04440 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.81□□□□□ -1.8
HLA-DPB1P04440 AC012020.1-201ENST00000624541 1728 ntBASIC3.81□□□□□ -1.8
HLA-DPB1P04440 AL132640.2-201ENST00000559968 1698 ntBASIC3.81□□□□□ -1.8
HLA-DPB1P04440 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
HLA-DPB1P04440 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
HLA-DPB1P04440 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HLA-DPB1P04440 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HLA-DPB1P04440 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HLA-DPB1P04440 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.81□□□□□ -1.8
HLA-DPB1P04440 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
HLA-DPB1P04440 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
HLA-DPB1P04440 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms