Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 NCOA4P2-201ENST00000340589 1813 ntBASIC4.95□□□□□ -1.62
COL1A1P02452 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
COL1A1P02452 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.95□□□□□ -1.62
COL1A1P02452 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL1A1P02452 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
COL1A1P02452 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.95□□□□□ -1.62
COL1A1P02452 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.95□□□□□ -1.62
COL1A1P02452 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.95□□□□□ -1.62
COL1A1P02452 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.94□□□□□ -1.62
COL1A1P02452 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL1A1P02452 AL353748.1-201ENST00000440753 474 ntBASIC4.94□□□□□ -1.62
COL1A1P02452 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.94□□□□□ -1.62
COL1A1P02452 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.94□□□□□ -1.62
COL1A1P02452 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.94□□□□□ -1.62
COL1A1P02452 RPS4XP15-201ENST00000489210 795 ntBASIC4.94□□□□□ -1.62
COL1A1P02452 AC021146.3-201ENST00000511911 260 ntBASIC4.94□□□□□ -1.62
COL1A1P02452 PAICSP4-201ENST00000517543 1253 ntBASIC4.94□□□□□ -1.62
COL1A1P02452 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.94□□□□□ -1.62
COL1A1P02452 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.94□□□□□ -1.62
COL1A1P02452 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.94□□□□□ -1.62
COL1A1P02452 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.94□□□□□ -1.62
COL1A1P02452 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.94□□□□□ -1.62
COL1A1P02452 AL161756.2-201ENST00000604597 246 ntBASIC4.94□□□□□ -1.62
COL1A1P02452 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.94□□□□□ -1.62
COL1A1P02452 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.94□□□□□ -1.62
COL1A1P02452 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
COL1A1P02452 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
COL1A1P02452 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
COL1A1P02452 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL1A1P02452 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
COL1A1P02452 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.94□□□□□ -1.62
COL1A1P02452 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL1A1P02452 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.94□□□□□ -1.62
COL1A1P02452 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
COL1A1P02452 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.94□□□□□ -1.62
COL1A1P02452 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
COL1A1P02452 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
COL1A1P02452 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL1A1P02452 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
COL1A1P02452 MIR200C-201ENST00000384980 68 ntBASIC4.94□□□□□ -1.62
COL1A1P02452 VN1R8P-201ENST00000407739 893 ntBASIC4.94□□□□□ -1.62
COL1A1P02452 RPS3AP25-201ENST00000411660 793 ntBASIC4.94□□□□□ -1.62
COL1A1P02452 AL450992.3-201ENST00000413192 568 ntBASIC4.94□□□□□ -1.62
COL1A1P02452 CRYBB2P1-203ENST00000415709 538 ntBASIC4.94□□□□□ -1.62
COL1A1P02452 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
COL1A1P02452 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.94□□□□□ -1.62
COL1A1P02452 MTCO1P54-201ENST00000430139 712 ntBASIC4.94□□□□□ -1.62
COL1A1P02452 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.94□□□□□ -1.62
COL1A1P02452 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.94□□□□□ -1.62
COL1A1P02452 FCF1P7-201ENST00000451185 558 ntBASIC4.94□□□□□ -1.62
COL1A1P02452 AC092691.2-201ENST00000461787 803 ntBASIC4.94□□□□□ -1.62
COL1A1P02452 RN7SKP157-201ENST00000516174 282 ntBASIC4.94□□□□□ -1.62
COL1A1P02452 AC008694.2-201ENST00000517591 306 ntBASIC4.94□□□□□ -1.62
COL1A1P02452 AC026403.1-201ENST00000518938 295 ntBASIC4.94□□□□□ -1.62
COL1A1P02452 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.94□□□□□ -1.62
COL1A1P02452 CCNG2P1-201ENST00000549521 1000 ntBASIC4.94□□□□□ -1.62
COL1A1P02452 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.94□□□□□ -1.62
COL1A1P02452 AC087499.8-201ENST00000578406 226 ntBASIC4.94□□□□□ -1.62
COL1A1P02452 AL592436.1-201ENST00000605135 558 ntBASIC4.94□□□□□ -1.62
COL1A1P02452 AC005858.4-201ENST00000623191 700 ntBASIC4.94□□□□□ -1.62
COL1A1P02452 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
COL1A1P02452 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
COL1A1P02452 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL1A1P02452 AC016588.2-201ENST00000632484 3021 ntBASIC4.93□□□□□ -1.62
COL1A1P02452 RNA5SP119-201ENST00000362715 117 ntBASIC4.93□□□□□ -1.62
COL1A1P02452 YME1L1P1-201ENST00000429435 297 ntBASIC4.93□□□□□ -1.62
COL1A1P02452 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.93□□□□□ -1.62
COL1A1P02452 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.93□□□□□ -1.62
COL1A1P02452 PTMAP3-201ENST00000447474 330 ntBASIC4.93□□□□□ -1.62
COL1A1P02452 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.93□□□□□ -1.62
COL1A1P02452 RPL7P1-201ENST00000468161 747 ntBASIC4.93□□□□□ -1.62
COL1A1P02452 RPL7P9-201ENST00000468715 747 ntBASIC4.93□□□□□ -1.62
COL1A1P02452 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.93□□□□□ -1.62
COL1A1P02452 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC4.93□□□□□ -1.62
COL1A1P02452 MTND1P6-201ENST00000523621 946 ntBASIC4.93□□□□□ -1.62
COL1A1P02452 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC4.93□□□□□ -1.62
COL1A1P02452 AC093524.1-201ENST00000564266 1094 ntBASIC4.93□□□□□ -1.62
COL1A1P02452 AC007066.2-202ENST00000566531 914 ntBASIC4.93□□□□□ -1.62
COL1A1P02452 AC007599.1-201ENST00000568688 1174 ntBASIC4.93□□□□□ -1.62
COL1A1P02452 AC090312.1-201ENST00000580637 348 ntBASIC4.93□□□□□ -1.62
COL1A1P02452 AC017100.2-201ENST00000584628 355 ntBASIC4.93□□□□□ -1.62
COL1A1P02452 AC138907.10-201ENST00000623708 983 ntBASIC4.93□□□□□ -1.62
COL1A1P02452 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.93□□□□□ -1.62
COL1A1P02452 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.93□□□□□ -1.62
COL1A1P02452 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
COL1A1P02452 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
COL1A1P02452 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
COL1A1P02452 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.92□□□□□ -1.62
COL1A1P02452 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL1A1P02452 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL1A1P02452 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL1A1P02452 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL1A1P02452 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
COL1A1P02452 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL1A1P02452 IL6STP1-201ENST00000346911 1020 ntBASIC4.92□□□□□ -1.62
COL1A1P02452 SNORA60-201ENST00000362396 134 ntBASIC4.92□□□□□ -1.62
COL1A1P02452 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
COL1A1P02452 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.92□□□□□ -1.62
COL1A1P02452 AL157884.3-201ENST00000448273 1184 ntBASIC4.92□□□□□ -1.62
COL1A1P02452 ARL4AP1-201ENST00000503220 705 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms