Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 AC233309.1-201ENST00000619522 751 ntBASIC7.38□□□□□ -1.23
ALDH1A1P00352 AL732618.1-201ENST00000623251 301 ntBASIC7.38□□□□□ -1.23
ALDH1A1P00352 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC7.38□□□□□ -1.23
ALDH1A1P00352 MKKS-204ENST00000639674 192 ntBASIC7.38□□□□□ -1.23
ALDH1A1P00352 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
ALDH1A1P00352 HCG18-244ENST00000602516 2890 ntBASIC7.38□□□□□ -1.23
ALDH1A1P00352 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
ALDH1A1P00352 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
ALDH1A1P00352 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
ALDH1A1P00352 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC7.38□□□□□ -1.23
ALDH1A1P00352 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
ALDH1A1P00352 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
ALDH1A1P00352 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
ALDH1A1P00352 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC7.38□□□□□ -1.23
ALDH1A1P00352 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC7.37□□□□□ -1.23
ALDH1A1P00352 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
ALDH1A1P00352 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
ALDH1A1P00352 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC7.37□□□□□ -1.23
ALDH1A1P00352 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
ALDH1A1P00352 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
ALDH1A1P00352 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
ALDH1A1P00352 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
ALDH1A1P00352 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC7.37□□□□□ -1.23
ALDH1A1P00352 COL6A4P1-202ENST00000487147 4317 ntBASIC7.37□□□□□ -1.23
ALDH1A1P00352 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC7.37□□□□□ -1.23
ALDH1A1P00352 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
ALDH1A1P00352 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
ALDH1A1P00352 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
ALDH1A1P00352 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
ALDH1A1P00352 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
ALDH1A1P00352 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC7.37□□□□□ -1.23
ALDH1A1P00352 MID1-212ENST00000616003 1926 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
ALDH1A1P00352 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
ALDH1A1P00352 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
ALDH1A1P00352 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
ALDH1A1P00352 SNORA21-201ENST00000362423 132 ntBASIC7.37□□□□□ -1.23
ALDH1A1P00352 Y_RNA.149-201ENST00000363558 117 ntBASIC7.37□□□□□ -1.23
ALDH1A1P00352 Y_RNA.197-201ENST00000364004 102 ntBASIC7.37□□□□□ -1.23
ALDH1A1P00352 PARD3-204ENST00000374768 799 ntTSL 3 BASIC7.37□□□□□ -1.23
ALDH1A1P00352 RNU6-308P-201ENST00000390957 107 ntBASIC7.37□□□□□ -1.23
ALDH1A1P00352 RPS4XP8-201ENST00000402039 771 ntBASIC7.37□□□□□ -1.23
ALDH1A1P00352 AL589647.1-201ENST00000402485 466 ntBASIC7.37□□□□□ -1.23
ALDH1A1P00352 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC7.37□□□□□ -1.23
ALDH1A1P00352 AC083875.1-201ENST00000419509 405 ntBASIC7.37□□□□□ -1.23
ALDH1A1P00352 AL953862.1-201ENST00000423016 168 ntBASIC7.37□□□□□ -1.23
ALDH1A1P00352 CYP4F32P-201ENST00000426492 504 ntBASIC7.37□□□□□ -1.23
ALDH1A1P00352 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC7.37□□□□□ -1.23
ALDH1A1P00352 AL627308.1-201ENST00000435693 821 ntBASIC7.37□□□□□ -1.23
ALDH1A1P00352 CACYBPP1-201ENST00000438592 684 ntBASIC7.37□□□□□ -1.23
ALDH1A1P00352 RPL23AP16-201ENST00000441715 421 ntBASIC7.37□□□□□ -1.23
ALDH1A1P00352 AC064862.4-201ENST00000442180 334 ntBASIC7.37□□□□□ -1.23
ALDH1A1P00352 RPL36AP39-201ENST00000445859 318 ntBASIC7.37□□□□□ -1.23
ALDH1A1P00352 AC104306.1-201ENST00000449702 371 ntBASIC7.37□□□□□ -1.23
ALDH1A1P00352 HIGD1AP16-201ENST00000450986 258 ntBASIC7.37□□□□□ -1.23
ALDH1A1P00352 AC002553.3-201ENST00000453002 341 ntBASIC7.37□□□□□ -1.23
ALDH1A1P00352 AC091685.2-201ENST00000454924 864 ntBASIC7.37□□□□□ -1.23
ALDH1A1P00352 BTF3P15-201ENST00000455606 336 ntBASIC7.37□□□□□ -1.23
ALDH1A1P00352 RNU7-152P-201ENST00000458982 64 ntBASIC7.37□□□□□ -1.23
ALDH1A1P00352 RNU6-261P-201ENST00000459506 102 ntBASIC7.37□□□□□ -1.23
ALDH1A1P00352 HMGB3P15-201ENST00000507326 574 ntBASIC7.37□□□□□ -1.23
ALDH1A1P00352 AC083906.1-201ENST00000509298 406 ntBASIC7.37□□□□□ -1.23
ALDH1A1P00352 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC7.37□□□□□ -1.23
ALDH1A1P00352 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC7.37□□□□□ -1.23
ALDH1A1P00352 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC7.37□□□□□ -1.23
ALDH1A1P00352 RNU4-49P-201ENST00000516080 140 ntBASIC7.37□□□□□ -1.23
ALDH1A1P00352 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC7.37□□□□□ -1.23
ALDH1A1P00352 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC7.37□□□□□ -1.23
ALDH1A1P00352 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC7.37□□□□□ -1.23
ALDH1A1P00352 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC7.37□□□□□ -1.23
ALDH1A1P00352 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC7.37□□□□□ -1.23
ALDH1A1P00352 SNRPGP18-201ENST00000553000 214 ntBASIC7.37□□□□□ -1.23
ALDH1A1P00352 AL591767.3-201ENST00000554632 525 ntBASIC7.37□□□□□ -1.23
ALDH1A1P00352 SUB1P2-201ENST00000556401 297 ntBASIC7.37□□□□□ -1.23
ALDH1A1P00352 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC7.37□□□□□ -1.23
ALDH1A1P00352 MYL12BP1-201ENST00000569826 507 ntBASIC7.37□□□□□ -1.23
ALDH1A1P00352 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC7.37□□□□□ -1.23
ALDH1A1P00352 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC7.37□□□□□ -1.23
ALDH1A1P00352 RN7SL475P-201ENST00000583379 298 ntBASIC7.37□□□□□ -1.23
ALDH1A1P00352 AC010463.3-201ENST00000594077 500 ntBASIC7.37□□□□□ -1.23
ALDH1A1P00352 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC7.37□□□□□ -1.23
ALDH1A1P00352 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
ALDH1A1P00352 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC7.37□□□□□ -1.23
ALDH1A1P00352 AC007938.3-201ENST00000604965 623 ntBASIC7.37□□□□□ -1.23
ALDH1A1P00352 AP000654.2-201ENST00000605633 586 ntBASIC7.37□□□□□ -1.23
ALDH1A1P00352 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC7.37□□□□□ -1.23
ALDH1A1P00352 uc_338.22-201ENST00000622722 187 ntBASIC7.37□□□□□ -1.23
ALDH1A1P00352 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
ALDH1A1P00352 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
ALDH1A1P00352 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
ALDH1A1P00352 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
ALDH1A1P00352 AC061975.7-201ENST00000592016 2692 ntBASIC7.37□□□□□ -1.23
ALDH1A1P00352 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
ALDH1A1P00352 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
ALDH1A1P00352 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
ALDH1A1P00352 MAPK6PS2-201ENST00000379571 2060 ntBASIC7.37□□□□□ -1.23
ALDH1A1P00352 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC7.37□□□□□ -1.23
ALDH1A1P00352 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC7.36□□□□□ -1.23
ALDH1A1P00352 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC7.36□□□□□ -1.23
ALDH1A1P00352 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
ALDH1A1P00352 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms