Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.69□□□□□ -1.66
CTDNEP1O95476 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.69□□□□□ -1.66
CTDNEP1O95476 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.68□□□□□ -1.66
CTDNEP1O95476 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CTDNEP1O95476 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CTDNEP1O95476 LINC01355-201ENST00000566551 5444 ntBASIC4.68□□□□□ -1.66
CTDNEP1O95476 RNA5SP130-201ENST00000364431 114 ntBASIC4.68□□□□□ -1.66
CTDNEP1O95476 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CTDNEP1O95476 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CTDNEP1O95476 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.68□□□□□ -1.66
CTDNEP1O95476 TRIM60P17-201ENST00000415181 719 ntBASIC4.68□□□□□ -1.66
CTDNEP1O95476 AC004552.1-201ENST00000419089 348 ntBASIC4.68□□□□□ -1.66
CTDNEP1O95476 GTF2IP2-201ENST00000424290 697 ntBASIC4.68□□□□□ -1.66
CTDNEP1O95476 AC234779.1-201ENST00000425910 285 ntBASIC4.68□□□□□ -1.66
CTDNEP1O95476 NANOGP6-201ENST00000429190 847 ntBASIC4.68□□□□□ -1.66
CTDNEP1O95476 VN1R25P-201ENST00000443385 738 ntBASIC4.68□□□□□ -1.66
CTDNEP1O95476 FCF1P7-201ENST00000451185 558 ntBASIC4.68□□□□□ -1.66
CTDNEP1O95476 VN1R40P-201ENST00000455196 941 ntBASIC4.68□□□□□ -1.66
CTDNEP1O95476 AC010618.1-201ENST00000469924 477 ntBASIC4.68□□□□□ -1.66
CTDNEP1O95476 RPS26P3-201ENST00000470205 348 ntBASIC4.68□□□□□ -1.66
CTDNEP1O95476 RPL23AP2-201ENST00000471227 466 ntBASIC4.68□□□□□ -1.66
CTDNEP1O95476 AC090543.2-201ENST00000483963 348 ntBASIC4.68□□□□□ -1.66
CTDNEP1O95476 AC004057.1-201ENST00000485827 348 ntBASIC4.68□□□□□ -1.66
CTDNEP1O95476 AC026979.1-201ENST00000492525 396 ntBASIC4.68□□□□□ -1.66
CTDNEP1O95476 RPL29P14-201ENST00000495837 428 ntBASIC4.68□□□□□ -1.66
CTDNEP1O95476 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CTDNEP1O95476 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.68□□□□□ -1.66
CTDNEP1O95476 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.68□□□□□ -1.66
CTDNEP1O95476 AC025627.2-201ENST00000576220 160 ntBASIC4.68□□□□□ -1.66
CTDNEP1O95476 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.68□□□□□ -1.66
CTDNEP1O95476 AL451044.1-201ENST00000604867 238 ntBASIC4.68□□□□□ -1.66
CTDNEP1O95476 MIR6748-201ENST00000610433 71 ntBASIC4.68□□□□□ -1.66
CTDNEP1O95476 MIR6758-201ENST00000620653 63 ntBASIC4.68□□□□□ -1.66
CTDNEP1O95476 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CTDNEP1O95476 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CTDNEP1O95476 KPNA2P2-201ENST00000419546 1489 ntBASIC4.68□□□□□ -1.66
CTDNEP1O95476 AC093909.5-201ENST00000621839 1799 ntBASIC4.68□□□□□ -1.66
CTDNEP1O95476 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CTDNEP1O95476 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CTDNEP1O95476 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CTDNEP1O95476 USP9YP4-201ENST00000424401 1745 ntBASIC4.67□□□□□ -1.66
CTDNEP1O95476 AC092111.2-201ENST00000611627 1414 ntBASIC4.67□□□□□ -1.66
CTDNEP1O95476 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CTDNEP1O95476 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CTDNEP1O95476 RNA5SP399-201ENST00000364003 117 ntBASIC4.67□□□□□ -1.66
CTDNEP1O95476 MIR137-201ENST00000385223 102 ntBASIC4.67□□□□□ -1.66
CTDNEP1O95476 HMGB3P19-201ENST00000403971 560 ntBASIC4.67□□□□□ -1.66
CTDNEP1O95476 AL121834.1-202ENST00000404494 277 ntBASIC4.67□□□□□ -1.66
CTDNEP1O95476 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC4.67□□□□□ -1.66
CTDNEP1O95476 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC4.67□□□□□ -1.66
CTDNEP1O95476 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.67□□□□□ -1.66
CTDNEP1O95476 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.67□□□□□ -1.66
CTDNEP1O95476 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC4.67□□□□□ -1.66
CTDNEP1O95476 AC114982.2-201ENST00000461396 358 ntBASIC4.67□□□□□ -1.66
CTDNEP1O95476 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.67□□□□□ -1.66
CTDNEP1O95476 OR9N1P-201ENST00000491296 333 ntBASIC4.67□□□□□ -1.66
CTDNEP1O95476 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.67□□□□□ -1.66
CTDNEP1O95476 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.67□□□□□ -1.66
CTDNEP1O95476 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC4.67□□□□□ -1.66
CTDNEP1O95476 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.67□□□□□ -1.66
CTDNEP1O95476 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.67□□□□□ -1.66
CTDNEP1O95476 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC4.67□□□□□ -1.66
CTDNEP1O95476 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.67□□□□□ -1.66
CTDNEP1O95476 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.67□□□□□ -1.66
CTDNEP1O95476 AC084759.1-201ENST00000561168 290 ntBASIC4.67□□□□□ -1.66
CTDNEP1O95476 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CTDNEP1O95476 AC010547.7-201ENST00000570323 333 ntBASIC4.67□□□□□ -1.66
CTDNEP1O95476 AL023583.1-201ENST00000607518 1143 ntBASIC4.67□□□□□ -1.66
CTDNEP1O95476 AP000255.1-201ENST00000610276 676 ntBASIC4.67□□□□□ -1.66
CTDNEP1O95476 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.67□□□□□ -1.66
CTDNEP1O95476 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC4.67□□□□□ -1.66
CTDNEP1O95476 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CTDNEP1O95476 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CTDNEP1O95476 AC006971.1-201ENST00000407916 4486 ntBASIC4.67□□□□□ -1.66
CTDNEP1O95476 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
CTDNEP1O95476 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.66□□□□□ -1.66
CTDNEP1O95476 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CTDNEP1O95476 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CTDNEP1O95476 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC4.66□□□□□ -1.66
CTDNEP1O95476 JKAMPP1-201ENST00000413804 919 ntBASIC4.66□□□□□ -1.66
CTDNEP1O95476 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.66□□□□□ -1.66
CTDNEP1O95476 AL356095.1-201ENST00000417217 199 ntBASIC4.66□□□□□ -1.66
CTDNEP1O95476 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.66□□□□□ -1.66
CTDNEP1O95476 AC115285.1-201ENST00000424879 736 ntBASIC4.66□□□□□ -1.66
CTDNEP1O95476 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.66□□□□□ -1.66
CTDNEP1O95476 MRPL50P1-201ENST00000431951 384 ntBASIC4.66□□□□□ -1.66
CTDNEP1O95476 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.66□□□□□ -1.66
CTDNEP1O95476 AC069285.2-201ENST00000440210 275 ntBASIC4.66□□□□□ -1.66
CTDNEP1O95476 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CTDNEP1O95476 AL591363.1-201ENST00000450091 483 ntBASIC4.66□□□□□ -1.66
CTDNEP1O95476 AC009220.1-201ENST00000451614 275 ntBASIC4.66□□□□□ -1.66
CTDNEP1O95476 FABP3P2-201ENST00000453169 399 ntBASIC4.66□□□□□ -1.66
CTDNEP1O95476 RPL38P1-201ENST00000460914 211 ntBASIC4.66□□□□□ -1.66
CTDNEP1O95476 AC092691.2-201ENST00000461787 803 ntBASIC4.66□□□□□ -1.66
CTDNEP1O95476 AP000942.1-201ENST00000463969 747 ntBASIC4.66□□□□□ -1.66
CTDNEP1O95476 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CTDNEP1O95476 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.66□□□□□ -1.66
CTDNEP1O95476 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.66□□□□□ -1.66
CTDNEP1O95476 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CTDNEP1O95476 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms