Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 OR5P1P-201ENST00000299512 925 ntBASIC4.18□□□□□ -1.74
SEMA3DO95025 SNORD74.4-201ENST00000364129 80 ntBASIC4.18□□□□□ -1.74
SEMA3DO95025 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SEMA3DO95025 MIR3074-201ENST00000384885 81 ntBASIC4.18□□□□□ -1.74
SEMA3DO95025 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
SEMA3DO95025 MIR1911-201ENST00000410783 80 ntBASIC4.18□□□□□ -1.74
SEMA3DO95025 RPS20P14-201ENST00000412545 360 ntBASIC4.18□□□□□ -1.74
SEMA3DO95025 AC096644.3-201ENST00000416788 338 ntBASIC4.18□□□□□ -1.74
SEMA3DO95025 AC006065.1-201ENST00000422539 802 ntBASIC4.18□□□□□ -1.74
SEMA3DO95025 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.18□□□□□ -1.74
SEMA3DO95025 RPEP2-201ENST00000432149 701 ntBASIC4.18□□□□□ -1.74
SEMA3DO95025 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.18□□□□□ -1.74
SEMA3DO95025 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.18□□□□□ -1.74
SEMA3DO95025 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.18□□□□□ -1.74
SEMA3DO95025 MTCYBP14-201ENST00000457471 715 ntBASIC4.18□□□□□ -1.74
SEMA3DO95025 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.18□□□□□ -1.74
SEMA3DO95025 AL133372.1-201ENST00000493565 745 ntBASIC4.18□□□□□ -1.74
SEMA3DO95025 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.18□□□□□ -1.74
SEMA3DO95025 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.18□□□□□ -1.74
SEMA3DO95025 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.18□□□□□ -1.74
SEMA3DO95025 PHBP17-201ENST00000528576 541 ntBASIC4.18□□□□□ -1.74
SEMA3DO95025 AL352979.3-201ENST00000553515 247 ntBASIC4.18□□□□□ -1.74
SEMA3DO95025 AC021483.2-201ENST00000567415 758 ntBASIC4.18□□□□□ -1.74
SEMA3DO95025 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.18□□□□□ -1.74
SEMA3DO95025 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.18□□□□□ -1.74
SEMA3DO95025 BX323046.1-201ENST00000610145 535 ntBASIC4.18□□□□□ -1.74
SEMA3DO95025 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.18□□□□□ -1.74
SEMA3DO95025 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
SEMA3DO95025 AC009313.2-201ENST00000417893 1941 ntBASIC4.18□□□□□ -1.74
SEMA3DO95025 AL132640.2-201ENST00000559968 1698 ntBASIC4.18□□□□□ -1.74
SEMA3DO95025 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SEMA3DO95025 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SEMA3DO95025 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SEMA3DO95025 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.17□□□□□ -1.74
SEMA3DO95025 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.17□□□□□ -1.74
SEMA3DO95025 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SEMA3DO95025 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SEMA3DO95025 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.17□□□□□ -1.74
SEMA3DO95025 MFSD8-216ENST00000641147 4009 ntBASIC4.17□□□□□ -1.74
SEMA3DO95025 OR10AB1P-202ENST00000641219 1686 ntBASIC4.17□□□□□ -1.74
SEMA3DO95025 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SEMA3DO95025 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
SEMA3DO95025 AC067945.1-201ENST00000342609 618 ntBASIC4.17□□□□□ -1.74
SEMA3DO95025 RNU1-130P-201ENST00000363930 160 ntBASIC4.17□□□□□ -1.74
SEMA3DO95025 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SEMA3DO95025 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SEMA3DO95025 VN1R8P-201ENST00000407739 893 ntBASIC4.17□□□□□ -1.74
SEMA3DO95025 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.17□□□□□ -1.74
SEMA3DO95025 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.17□□□□□ -1.74
SEMA3DO95025 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.17□□□□□ -1.74
SEMA3DO95025 AL356387.2-201ENST00000422272 243 ntBASIC4.17□□□□□ -1.74
SEMA3DO95025 RBMY1KP-201ENST00000423480 476 ntBASIC4.17□□□□□ -1.74
SEMA3DO95025 RPEP3-201ENST00000425462 676 ntBASIC4.17□□□□□ -1.74
SEMA3DO95025 RPL23AP1-201ENST00000428990 471 ntBASIC4.17□□□□□ -1.74
SEMA3DO95025 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.17□□□□□ -1.74
SEMA3DO95025 AL451050.1-201ENST00000450126 415 ntBASIC4.17□□□□□ -1.74
SEMA3DO95025 ABCF2P2-201ENST00000450549 296 ntBASIC4.17□□□□□ -1.74
SEMA3DO95025 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
SEMA3DO95025 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.17□□□□□ -1.74
SEMA3DO95025 ATP1B1P1-201ENST00000509767 915 ntBASIC4.17□□□□□ -1.74
SEMA3DO95025 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC4.17□□□□□ -1.74
SEMA3DO95025 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.17□□□□□ -1.74
SEMA3DO95025 AC135001.1-201ENST00000544546 283 ntBASIC4.17□□□□□ -1.74
SEMA3DO95025 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.17□□□□□ -1.74
SEMA3DO95025 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SEMA3DO95025 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.17□□□□□ -1.74
SEMA3DO95025 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.17□□□□□ -1.74
SEMA3DO95025 AC019193.2-201ENST00000610012 634 ntBASIC4.17□□□□□ -1.74
SEMA3DO95025 AC019278.1-201ENST00000623516 479 ntBASIC4.17□□□□□ -1.74
SEMA3DO95025 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SEMA3DO95025 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.17□□□□□ -1.74
SEMA3DO95025 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
SEMA3DO95025 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SEMA3DO95025 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
SEMA3DO95025 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SEMA3DO95025 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
SEMA3DO95025 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.16□□□□□ -1.74
SEMA3DO95025 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.16□□□□□ -1.74
SEMA3DO95025 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SEMA3DO95025 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SEMA3DO95025 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SEMA3DO95025 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
SEMA3DO95025 AC008033.1-201ENST00000216407 1162 ntBASIC4.16□□□□□ -1.74
SEMA3DO95025 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SEMA3DO95025 RNU1-15P-201ENST00000353977 144 ntBASIC4.16□□□□□ -1.74
SEMA3DO95025 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.16□□□□□ -1.74
SEMA3DO95025 MIR192-201ENST00000384915 110 ntBASIC4.16□□□□□ -1.74
SEMA3DO95025 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
SEMA3DO95025 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SEMA3DO95025 SNORA11F-201ENST00000408237 128 ntBASIC4.16□□□□□ -1.74
SEMA3DO95025 RNA5SP239-201ENST00000410218 129 ntBASIC4.16□□□□□ -1.74
SEMA3DO95025 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.16□□□□□ -1.74
SEMA3DO95025 TMSB10P2-201ENST00000416049 131 ntBASIC4.16□□□□□ -1.74
SEMA3DO95025 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.16□□□□□ -1.74
SEMA3DO95025 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.16□□□□□ -1.74
SEMA3DO95025 NANOGP6-201ENST00000429190 847 ntBASIC4.16□□□□□ -1.74
SEMA3DO95025 ELOCP10-201ENST00000440624 327 ntBASIC4.16□□□□□ -1.74
SEMA3DO95025 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.16□□□□□ -1.74
SEMA3DO95025 RPL21P126-201ENST00000470049 478 ntBASIC4.16□□□□□ -1.74
SEMA3DO95025 AC111000.3-201ENST00000508057 576 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms