Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC090017.1-201ENST00000548612 1779 ntBASIC4.4□□□□□ -1.71
PDLIM1O00151 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PDLIM1O00151 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.4□□□□□ -1.71
PDLIM1O00151 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.4□□□□□ -1.71
PDLIM1O00151 AC009501.3-201ENST00000605001 1352 ntBASIC4.4□□□□□ -1.71
PDLIM1O00151 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
PDLIM1O00151 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
PDLIM1O00151 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PDLIM1O00151 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.39□□□□□ -1.71
PDLIM1O00151 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
PDLIM1O00151 AC131971.1-201ENST00000332881 1482 ntBASIC4.39□□□□□ -1.71
PDLIM1O00151 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
PDLIM1O00151 MIR423-201ENST00000362201 94 ntBASIC4.39□□□□□ -1.71
PDLIM1O00151 SNORA62.2-201ENST00000364672 152 ntBASIC4.39□□□□□ -1.71
PDLIM1O00151 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PDLIM1O00151 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PDLIM1O00151 SNORA51.8-201ENST00000384234 132 ntBASIC4.39□□□□□ -1.71
PDLIM1O00151 RNU1-89P-201ENST00000384592 164 ntBASIC4.39□□□□□ -1.71
PDLIM1O00151 RHEBP3-201ENST00000411920 351 ntBASIC4.39□□□□□ -1.71
PDLIM1O00151 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.39□□□□□ -1.71
PDLIM1O00151 CHEK2P3-201ENST00000416118 248 ntBASIC4.39□□□□□ -1.71
PDLIM1O00151 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.39□□□□□ -1.71
PDLIM1O00151 AF186996.5-201ENST00000418098 904 ntBASIC4.39□□□□□ -1.71
PDLIM1O00151 AC099336.2-201ENST00000422457 254 ntBASIC4.39□□□□□ -1.71
PDLIM1O00151 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.39□□□□□ -1.71
PDLIM1O00151 AC115285.1-201ENST00000424879 736 ntBASIC4.39□□□□□ -1.71
PDLIM1O00151 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.39□□□□□ -1.71
PDLIM1O00151 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.39□□□□□ -1.71
PDLIM1O00151 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.39□□□□□ -1.71
PDLIM1O00151 RPL12P3-201ENST00000440080 396 ntBASIC4.39□□□□□ -1.71
PDLIM1O00151 AL137845.2-201ENST00000444292 988 ntBASIC4.39□□□□□ -1.71
PDLIM1O00151 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.39□□□□□ -1.71
PDLIM1O00151 MTND2P25-201ENST00000449028 610 ntBASIC4.39□□□□□ -1.71
PDLIM1O00151 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.39□□□□□ -1.71
PDLIM1O00151 RPL7P61-201ENST00000451721 751 ntBASIC4.39□□□□□ -1.71
PDLIM1O00151 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.39□□□□□ -1.71
PDLIM1O00151 RPL5P32-201ENST00000454085 879 ntBASIC4.39□□□□□ -1.71
PDLIM1O00151 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.39□□□□□ -1.71
PDLIM1O00151 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PDLIM1O00151 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC4.39□□□□□ -1.71
PDLIM1O00151 AC099560.2-201ENST00000457554 255 ntBASIC4.39□□□□□ -1.71
PDLIM1O00151 RN7SL610P-201ENST00000463845 291 ntBASIC4.39□□□□□ -1.71
PDLIM1O00151 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.39□□□□□ -1.71
PDLIM1O00151 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.39□□□□□ -1.71
PDLIM1O00151 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PDLIM1O00151 NDUFB5P1-201ENST00000508134 564 ntBASIC4.39□□□□□ -1.71
PDLIM1O00151 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.39□□□□□ -1.71
PDLIM1O00151 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.39□□□□□ -1.71
PDLIM1O00151 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.39□□□□□ -1.71
PDLIM1O00151 OR5D15P-201ENST00000531671 942 ntBASIC4.39□□□□□ -1.71
PDLIM1O00151 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.39□□□□□ -1.71
PDLIM1O00151 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.39□□□□□ -1.71
PDLIM1O00151 AL109741.3-201ENST00000561748 592 ntBASIC4.39□□□□□ -1.71
PDLIM1O00151 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.39□□□□□ -1.71
PDLIM1O00151 TVP23CP2-201ENST00000571473 623 ntBASIC4.39□□□□□ -1.71
PDLIM1O00151 MIR4443-201ENST00000585052 53 ntBASIC4.39□□□□□ -1.71
PDLIM1O00151 AC090948.2-201ENST00000607363 564 ntBASIC4.39□□□□□ -1.71
PDLIM1O00151 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.39□□□□□ -1.71
PDLIM1O00151 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.39□□□□□ -1.71
PDLIM1O00151 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.39□□□□□ -1.71
PDLIM1O00151 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.39□□□□□ -1.71
PDLIM1O00151 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PDLIM1O00151 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.39□□□□□ -1.71
PDLIM1O00151 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
PDLIM1O00151 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.39□□□□□ -1.71
PDLIM1O00151 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PDLIM1O00151 AC092162.3-201ENST00000624511 1624 ntBASIC4.39□□□□□ -1.71
PDLIM1O00151 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PDLIM1O00151 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
PDLIM1O00151 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.38□□□□□ -1.71
PDLIM1O00151 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PDLIM1O00151 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
PDLIM1O00151 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
PDLIM1O00151 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC4.38□□□□□ -1.71
PDLIM1O00151 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.38□□□□□ -1.71
PDLIM1O00151 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.38□□□□□ -1.71
PDLIM1O00151 RPA2P2-201ENST00000419698 796 ntBASIC4.38□□□□□ -1.71
PDLIM1O00151 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.38□□□□□ -1.71
PDLIM1O00151 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PDLIM1O00151 MTCO3P43-201ENST00000440974 771 ntBASIC4.38□□□□□ -1.71
PDLIM1O00151 AL500527.1-201ENST00000448532 255 ntBASIC4.38□□□□□ -1.71
PDLIM1O00151 PPIAP21-201ENST00000464473 501 ntBASIC4.38□□□□□ -1.71
PDLIM1O00151 OR9N1P-202ENST00000494289 481 ntBASIC4.38□□□□□ -1.71
PDLIM1O00151 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.38□□□□□ -1.71
PDLIM1O00151 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.38□□□□□ -1.71
PDLIM1O00151 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.38□□□□□ -1.71
PDLIM1O00151 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.38□□□□□ -1.71
PDLIM1O00151 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.38□□□□□ -1.71
PDLIM1O00151 HNRNPCP4-201ENST00000571636 900 ntBASIC4.38□□□□□ -1.71
PDLIM1O00151 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC4.38□□□□□ -1.71
PDLIM1O00151 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.38□□□□□ -1.71
PDLIM1O00151 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.38□□□□□ -1.71
PDLIM1O00151 AC123786.2-201ENST00000603459 275 ntBASIC4.38□□□□□ -1.71
PDLIM1O00151 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.38□□□□□ -1.71
PDLIM1O00151 AL121932.1-201ENST00000605542 214 ntBASIC4.38□□□□□ -1.71
PDLIM1O00151 AC017076.1-201ENST00000607613 578 ntBASIC4.38□□□□□ -1.71
PDLIM1O00151 AC087385.3-201ENST00000620477 187 ntBASIC4.38□□□□□ -1.71
PDLIM1O00151 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.38□□□□□ -1.71
PDLIM1O00151 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.38□□□□□ -1.71
PDLIM1O00151 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms