Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 RPS26P4-201ENST00000431743 355 ntBASIC4.54□□□□□ -1.68
NEDD8-MDP1E9PL57 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.54□□□□□ -1.68
NEDD8-MDP1E9PL57 XKRY2-201ENST00000442362 1093 ntBASIC4.54□□□□□ -1.68
NEDD8-MDP1E9PL57 RPL7P33-201ENST00000444159 742 ntBASIC4.54□□□□□ -1.68
NEDD8-MDP1E9PL57 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.54□□□□□ -1.68
NEDD8-MDP1E9PL57 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC4.54□□□□□ -1.68
NEDD8-MDP1E9PL57 UQCRHP4-201ENST00000471686 272 ntBASIC4.54□□□□□ -1.68
NEDD8-MDP1E9PL57 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.54□□□□□ -1.68
NEDD8-MDP1E9PL57 RN7SL41P-201ENST00000476144 297 ntBASIC4.54□□□□□ -1.68
NEDD8-MDP1E9PL57 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.54□□□□□ -1.68
NEDD8-MDP1E9PL57 PARP4P3-201ENST00000510265 317 ntBASIC4.54□□□□□ -1.68
NEDD8-MDP1E9PL57 AC034244.2-201ENST00000514668 858 ntBASIC4.54□□□□□ -1.68
NEDD8-MDP1E9PL57 MRPL49P2-201ENST00000521066 465 ntBASIC4.54□□□□□ -1.68
NEDD8-MDP1E9PL57 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.54□□□□□ -1.68
NEDD8-MDP1E9PL57 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.54□□□□□ -1.68
NEDD8-MDP1E9PL57 AL109766.1-201ENST00000555080 552 ntBASIC4.54□□□□□ -1.68
NEDD8-MDP1E9PL57 AC008966.2-201ENST00000606157 453 ntBASIC4.54□□□□□ -1.68
NEDD8-MDP1E9PL57 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.54□□□□□ -1.68
NEDD8-MDP1E9PL57 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.54□□□□□ -1.68
NEDD8-MDP1E9PL57 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
NEDD8-MDP1E9PL57 MIR6891-201ENST00000618788 93 ntBASIC4.54□□□□□ -1.68
NEDD8-MDP1E9PL57 AC140479.6-201ENST00000633535 357 ntBASIC4.54□□□□□ -1.68
NEDD8-MDP1E9PL57 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.54□□□□□ -1.68
NEDD8-MDP1E9PL57 EIF2AP4-201ENST00000424793 1781 ntBASIC4.54□□□□□ -1.68
NEDD8-MDP1E9PL57 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NEDD8-MDP1E9PL57 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NEDD8-MDP1E9PL57 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NEDD8-MDP1E9PL57 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NEDD8-MDP1E9PL57 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
NEDD8-MDP1E9PL57 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.54□□□□□ -1.68
NEDD8-MDP1E9PL57 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NEDD8-MDP1E9PL57 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.54□□□□□ -1.68
NEDD8-MDP1E9PL57 AC009951.1-201ENST00000623674 2614 ntBASIC4.54□□□□□ -1.68
NEDD8-MDP1E9PL57 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.54□□□□□ -1.68
NEDD8-MDP1E9PL57 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NEDD8-MDP1E9PL57 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NEDD8-MDP1E9PL57 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NEDD8-MDP1E9PL57 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
NEDD8-MDP1E9PL57 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NEDD8-MDP1E9PL57 AP001273.1-201ENST00000624493 3152 ntBASIC4.53□□□□□ -1.68
NEDD8-MDP1E9PL57 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
NEDD8-MDP1E9PL57 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.53□□□□□ -1.68
NEDD8-MDP1E9PL57 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.53□□□□□ -1.68
NEDD8-MDP1E9PL57 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NEDD8-MDP1E9PL57 RN7SKP224-201ENST00000364140 325 ntBASIC4.53□□□□□ -1.68
NEDD8-MDP1E9PL57 RNA5SP366-201ENST00000365454 123 ntBASIC4.53□□□□□ -1.68
NEDD8-MDP1E9PL57 RNU1-63P-201ENST00000383902 164 ntBASIC4.53□□□□□ -1.68
NEDD8-MDP1E9PL57 SNORA70C-201ENST00000384538 135 ntBASIC4.53□□□□□ -1.68
NEDD8-MDP1E9PL57 MIR3065-201ENST00000390137 79 ntBASIC4.53□□□□□ -1.68
NEDD8-MDP1E9PL57 AL357078.2-201ENST00000416486 427 ntBASIC4.53□□□□□ -1.68
NEDD8-MDP1E9PL57 AL139095.3-201ENST00000419672 1203 ntBASIC4.53□□□□□ -1.68
NEDD8-MDP1E9PL57 AL390879.2-203ENST00000426943 1121 ntBASIC4.53□□□□□ -1.68
NEDD8-MDP1E9PL57 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.53□□□□□ -1.68
NEDD8-MDP1E9PL57 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NEDD8-MDP1E9PL57 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC4.53□□□□□ -1.68
NEDD8-MDP1E9PL57 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.53□□□□□ -1.68
NEDD8-MDP1E9PL57 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.53□□□□□ -1.68
NEDD8-MDP1E9PL57 AC245517.2-201ENST00000442890 346 ntBASIC4.53□□□□□ -1.68
NEDD8-MDP1E9PL57 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC4.53□□□□□ -1.68
NEDD8-MDP1E9PL57 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.53□□□□□ -1.68
NEDD8-MDP1E9PL57 AL627224.1-201ENST00000448334 444 ntBASIC4.53□□□□□ -1.68
NEDD8-MDP1E9PL57 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.53□□□□□ -1.68
NEDD8-MDP1E9PL57 AL445433.1-201ENST00000457507 257 ntBASIC4.53□□□□□ -1.68
NEDD8-MDP1E9PL57 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.53□□□□□ -1.68
NEDD8-MDP1E9PL57 AC091167.1-201ENST00000492017 396 ntBASIC4.53□□□□□ -1.68
NEDD8-MDP1E9PL57 HMGB1P47-201ENST00000511281 589 ntBASIC4.53□□□□□ -1.68
NEDD8-MDP1E9PL57 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.53□□□□□ -1.68
NEDD8-MDP1E9PL57 MTCO1P35-201ENST00000515270 228 ntBASIC4.53□□□□□ -1.68
NEDD8-MDP1E9PL57 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.53□□□□□ -1.68
NEDD8-MDP1E9PL57 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.53□□□□□ -1.68
NEDD8-MDP1E9PL57 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NEDD8-MDP1E9PL57 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.53□□□□□ -1.68
NEDD8-MDP1E9PL57 SNX6P1-201ENST00000601728 1224 ntBASIC4.53□□□□□ -1.68
NEDD8-MDP1E9PL57 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC4.53□□□□□ -1.68
NEDD8-MDP1E9PL57 AC090181.2-201ENST00000602975 672 ntBASIC4.53□□□□□ -1.68
NEDD8-MDP1E9PL57 AC079587.1-201ENST00000603846 277 ntBASIC4.53□□□□□ -1.68
NEDD8-MDP1E9PL57 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.53□□□□□ -1.68
NEDD8-MDP1E9PL57 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.53□□□□□ -1.68
NEDD8-MDP1E9PL57 AC092159.4-201ENST00000624944 550 ntBASIC4.53□□□□□ -1.68
NEDD8-MDP1E9PL57 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NEDD8-MDP1E9PL57 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC4.53□□□□□ -1.68
NEDD8-MDP1E9PL57 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
NEDD8-MDP1E9PL57 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.53□□□□□ -1.69
NEDD8-MDP1E9PL57 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.53□□□□□ -1.69
NEDD8-MDP1E9PL57 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
NEDD8-MDP1E9PL57 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.52□□□□□ -1.69
NEDD8-MDP1E9PL57 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
NEDD8-MDP1E9PL57 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.52□□□□□ -1.69
NEDD8-MDP1E9PL57 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
NEDD8-MDP1E9PL57 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NEDD8-MDP1E9PL57 AL672167.1-203ENST00000641299 2975 ntBASIC4.52□□□□□ -1.69
NEDD8-MDP1E9PL57 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
NEDD8-MDP1E9PL57 RNU1-132P-201ENST00000364300 164 ntBASIC4.52□□□□□ -1.69
NEDD8-MDP1E9PL57 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.52□□□□□ -1.69
NEDD8-MDP1E9PL57 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.52□□□□□ -1.69
NEDD8-MDP1E9PL57 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.52□□□□□ -1.69
NEDD8-MDP1E9PL57 RPL23AP52-201ENST00000439311 478 ntBASIC4.52□□□□□ -1.69
NEDD8-MDP1E9PL57 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
NEDD8-MDP1E9PL57 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.52□□□□□ -1.69
NEDD8-MDP1E9PL57 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms