Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AC027176.2-201ENST00000559166 746 ntBASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 RN7SL690P-201ENST00000582087 240 ntBASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 RN7SL435P-201ENST00000584418 282 ntBASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 AL158196.1-201ENST00000616786 434 ntBASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 MIR6758-201ENST00000620653 63 ntBASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 AC067852.7-201ENST00000623270 535 ntBASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 AC011815.3-201ENST00000624194 473 ntBASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 AC114546.3-201ENST00000623582 1734 ntBASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 DHX40P1-201ENST00000588725 1412 ntBASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 CASC19-206ENST00000641028 1430 ntBASIC4.29□□□□□ -1.72
NPIPA2E9PIF3 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.28□□□□□ -1.72
NPIPA2E9PIF3 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NPIPA2E9PIF3 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NPIPA2E9PIF3 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NPIPA2E9PIF3 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.28□□□□□ -1.72
NPIPA2E9PIF3 KARSP3-201ENST00000571212 1504 ntBASIC4.28□□□□□ -1.72
NPIPA2E9PIF3 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
NPIPA2E9PIF3 RPL32P3-201ENST00000359025 275 ntBASIC4.28□□□□□ -1.72
NPIPA2E9PIF3 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NPIPA2E9PIF3 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NPIPA2E9PIF3 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.28□□□□□ -1.72
NPIPA2E9PIF3 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.28□□□□□ -1.72
NPIPA2E9PIF3 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC4.28□□□□□ -1.72
NPIPA2E9PIF3 NPM1P24-201ENST00000428039 894 ntBASIC4.28□□□□□ -1.72
NPIPA2E9PIF3 ZNF965P-201ENST00000432501 817 ntBASIC4.28□□□□□ -1.72
NPIPA2E9PIF3 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.28□□□□□ -1.72
NPIPA2E9PIF3 AC004938.1-201ENST00000438468 308 ntBASIC4.28□□□□□ -1.72
NPIPA2E9PIF3 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.28□□□□□ -1.72
NPIPA2E9PIF3 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.28□□□□□ -1.72
NPIPA2E9PIF3 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.28□□□□□ -1.72
NPIPA2E9PIF3 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC4.28□□□□□ -1.72
NPIPA2E9PIF3 RPL34P26-201ENST00000445636 354 ntBASIC4.28□□□□□ -1.72
NPIPA2E9PIF3 TPT1P12-201ENST00000448968 492 ntBASIC4.28□□□□□ -1.72
NPIPA2E9PIF3 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.28□□□□□ -1.72
NPIPA2E9PIF3 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.28□□□□□ -1.72
NPIPA2E9PIF3 NDUFS5P3-201ENST00000450668 321 ntBASIC4.28□□□□□ -1.72
NPIPA2E9PIF3 CYCSP42-201ENST00000450823 238 ntBASIC4.28□□□□□ -1.72
NPIPA2E9PIF3 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.28□□□□□ -1.72
NPIPA2E9PIF3 MTND2P28-201ENST00000457540 1044 ntBASIC4.28□□□□□ -1.72
NPIPA2E9PIF3 OR52A4P-201ENST00000472867 958 ntBASIC4.28□□□□□ -1.72
NPIPA2E9PIF3 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.28□□□□□ -1.72
NPIPA2E9PIF3 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.28□□□□□ -1.72
NPIPA2E9PIF3 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.28□□□□□ -1.72
NPIPA2E9PIF3 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.28□□□□□ -1.72
NPIPA2E9PIF3 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.28□□□□□ -1.72
NPIPA2E9PIF3 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.28□□□□□ -1.72
NPIPA2E9PIF3 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.28□□□□□ -1.72
NPIPA2E9PIF3 AC087477.6-201ENST00000559595 843 ntBASIC4.28□□□□□ -1.72
NPIPA2E9PIF3 RN7SL652P-201ENST00000577769 300 ntBASIC4.28□□□□□ -1.72
NPIPA2E9PIF3 MIR4284-201ENST00000578924 81 ntBASIC4.28□□□□□ -1.72
NPIPA2E9PIF3 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
NPIPA2E9PIF3 AC007423.1-201ENST00000605009 627 ntBASIC4.28□□□□□ -1.72
NPIPA2E9PIF3 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.28□□□□□ -1.72
NPIPA2E9PIF3 AC090525.3-201ENST00000605601 189 ntBASIC4.28□□□□□ -1.72
NPIPA2E9PIF3 AL450270.1-201ENST00000606160 391 ntBASIC4.28□□□□□ -1.72
NPIPA2E9PIF3 OR7A19P-201ENST00000608051 733 ntBASIC4.28□□□□□ -1.72
NPIPA2E9PIF3 AL162574.2-201ENST00000614618 657 ntBASIC4.28□□□□□ -1.72
NPIPA2E9PIF3 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.28□□□□□ -1.72
NPIPA2E9PIF3 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.28□□□□□ -1.72
NPIPA2E9PIF3 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NPIPA2E9PIF3 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NPIPA2E9PIF3 AL132640.2-201ENST00000559968 1698 ntBASIC4.28□□□□□ -1.72
NPIPA2E9PIF3 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
NPIPA2E9PIF3 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NPIPA2E9PIF3 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.28□□□□□ -1.72
NPIPA2E9PIF3 CYP1D1P-201ENST00000416662 1433 ntBASIC4.28□□□□□ -1.72
NPIPA2E9PIF3 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.28□□□□□ -1.72
NPIPA2E9PIF3 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NPIPA2E9PIF3 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
NPIPA2E9PIF3 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.27□□□□□ -1.73
NPIPA2E9PIF3 AL731532.2-201ENST00000623542 1953 ntBASIC4.27□□□□□ -1.73
NPIPA2E9PIF3 AL022393.1-201ENST00000625142 1677 ntBASIC4.27□□□□□ -1.73
NPIPA2E9PIF3 IGKV7-3-201ENST00000357453 298 ntBASIC4.27□□□□□ -1.73
NPIPA2E9PIF3 SNORD51.1-201ENST00000365405 77 ntBASIC4.27□□□□□ -1.73
NPIPA2E9PIF3 SNORA70F-201ENST00000384142 135 ntBASIC4.27□□□□□ -1.73
NPIPA2E9PIF3 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
NPIPA2E9PIF3 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
NPIPA2E9PIF3 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.27□□□□□ -1.73
NPIPA2E9PIF3 U3.35-201ENST00000408405 208 ntBASIC4.27□□□□□ -1.73
NPIPA2E9PIF3 GSTM3P2-201ENST00000412746 530 ntBASIC4.27□□□□□ -1.73
NPIPA2E9PIF3 AL591848.1-201ENST00000413092 322 ntBASIC4.27□□□□□ -1.73
NPIPA2E9PIF3 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.27□□□□□ -1.73
NPIPA2E9PIF3 P2RY10P2-201ENST00000416730 913 ntBASIC4.27□□□□□ -1.73
NPIPA2E9PIF3 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.27□□□□□ -1.73
NPIPA2E9PIF3 E2F6P2-201ENST00000420708 748 ntBASIC4.27□□□□□ -1.73
NPIPA2E9PIF3 AC073464.3-201ENST00000422564 712 ntBASIC4.27□□□□□ -1.73
NPIPA2E9PIF3 EIF4HP2-201ENST00000424380 563 ntBASIC4.27□□□□□ -1.73
NPIPA2E9PIF3 AC009965.2-201ENST00000425328 970 ntBASIC4.27□□□□□ -1.73
NPIPA2E9PIF3 OR2AH1P-201ENST00000425717 928 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms