Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
COL4A3BPQ9Y5P4 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
COL4A3BPQ9Y5P4 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
COL4A3BPQ9Y5P4 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
COL4A3BPQ9Y5P4 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
COL4A3BPQ9Y5P4 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC6□□□□□ -1.45
COL4A3BPQ9Y5P4 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC6□□□□□ -1.45
COL4A3BPQ9Y5P4 C4BPAP1-201ENST00000415474 1893 ntBASIC6□□□□□ -1.45
COL4A3BPQ9Y5P4 MAPK6PS2-201ENST00000379571 2060 ntBASIC6□□□□□ -1.45
COL4A3BPQ9Y5P4 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
COL4A3BPQ9Y5P4 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC6□□□□□ -1.45
COL4A3BPQ9Y5P4 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC6□□□□□ -1.45
COL4A3BPQ9Y5P4 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 AC120338.1-201ENST00000625074 1541 ntBASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 GVINP1-202ENST00000531871 7271 ntBASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 FAM133CP-201ENST00000332869 704 ntBASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 AC005294.1-201ENST00000355509 281 ntBASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 RNA5SP391-201ENST00000363456 119 ntBASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 MIR223-201ENST00000385204 110 ntBASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 FABP12P1-201ENST00000401911 322 ntBASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 NRBF2P2-201ENST00000413087 861 ntBASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 AL513175.1-201ENST00000431492 780 ntBASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 CEACAMP1-201ENST00000434624 1035 ntBASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 COX7BP2-201ENST00000437976 242 ntBASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 AC105402.2-201ENST00000438503 358 ntBASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 CNOT7P2-201ENST00000441051 832 ntBASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 COX6CP18-201ENST00000448769 222 ntBASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 AP000797.2-201ENST00000475768 606 ntBASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 AC004263.1-201ENST00000479327 332 ntBASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 RN7SL727P-201ENST00000482164 296 ntBASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 AC091951.3-201ENST00000504093 246 ntBASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 AC006499.3-201ENST00000506077 748 ntBASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 KRT19P6-201ENST00000510983 209 ntBASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 AC021193.1-201ENST00000511607 420 ntBASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 FABP5P12-201ENST00000515543 389 ntBASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 RNA5SP92-201ENST00000516437 110 ntBASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 MRPS36P3-201ENST00000519284 130 ntBASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 C1GALT1P3-201ENST00000522049 819 ntBASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 DUXAP5-201ENST00000529668 529 ntBASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 AC023538.1-201ENST00000534576 736 ntBASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 AC005832.3-201ENST00000537929 631 ntBASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 AC010198.2-201ENST00000550612 259 ntBASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 AC005341.1-201ENST00000571086 708 ntBASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 AC108738.1-201ENST00000603703 237 ntBASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 MIR6719-201ENST00000622428 87 ntBASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 AC006210.2-201ENST00000367074 1545 ntBASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
COL4A3BPQ9Y5P4 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL4A3BPQ9Y5P4 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.98□□□□□ -1.45
COL4A3BPQ9Y5P4 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.98□□□□□ -1.45
COL4A3BPQ9Y5P4 AC093535.2-201ENST00000624769 2326 ntBASIC5.98□□□□□ -1.45
COL4A3BPQ9Y5P4 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
COL4A3BPQ9Y5P4 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.98□□□□□ -1.45
COL4A3BPQ9Y5P4 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
COL4A3BPQ9Y5P4 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL4A3BPQ9Y5P4 MIR133A2-201ENST00000347538 102 ntBASIC5.98□□□□□ -1.45
COL4A3BPQ9Y5P4 RNU6-492P-201ENST00000363035 104 ntBASIC5.98□□□□□ -1.45
COL4A3BPQ9Y5P4 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
COL4A3BPQ9Y5P4 MTCO3P31-201ENST00000405526 789 ntBASIC5.98□□□□□ -1.45
COL4A3BPQ9Y5P4 AL512430.2-201ENST00000406786 339 ntBASIC5.98□□□□□ -1.45
COL4A3BPQ9Y5P4 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC5.98□□□□□ -1.45
COL4A3BPQ9Y5P4 RNU4-34P-201ENST00000410431 124 ntBASIC5.98□□□□□ -1.45
COL4A3BPQ9Y5P4 GTF2IP5-201ENST00000414608 731 ntBASIC5.98□□□□□ -1.45
COL4A3BPQ9Y5P4 AL008987.1-201ENST00000415528 237 ntBASIC5.98□□□□□ -1.45
COL4A3BPQ9Y5P4 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.98□□□□□ -1.45
COL4A3BPQ9Y5P4 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
COL4A3BPQ9Y5P4 OR52B5P-201ENST00000435337 951 ntBASIC5.98□□□□□ -1.45
COL4A3BPQ9Y5P4 AL627308.1-201ENST00000435693 821 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms