Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 ABCC13-202ENST00000463099 3842 ntBASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 ELL2P3-201ENST00000457883 1602 ntBASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 RNA5SP183-201ENST00000362452 119 ntBASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 RNU4-4P-201ENST00000364588 130 ntBASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 RNU6-619P-201ENST00000365146 108 ntBASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 RNU4-2-201ENST00000365668 141 ntBASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 AL590084.2-201ENST00000401481 382 ntBASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 RN7SKP213-201ENST00000410746 298 ntBASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 AL593851.1-201ENST00000426171 157 ntBASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 MTND2P40-201ENST00000436718 841 ntBASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 THAP5P1-201ENST00000439089 262 ntBASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 SEPT7P3-201ENST00000455017 621 ntBASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 MTND2P28-201ENST00000457540 1044 ntBASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 RPL31P3-201ENST00000458430 332 ntBASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 AC111000.2-201ENST00000507775 550 ntBASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 NDUFB5P1-201ENST00000508134 564 ntBASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 MTCYBP16-201ENST00000509187 1129 ntBASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 AC092709.1-201ENST00000521355 1045 ntBASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 AC135628.1-201ENST00000568867 534 ntBASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 RN7SL708P-201ENST00000580952 299 ntBASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 AC124312.4-201ENST00000605533 310 ntBASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 AP004247.3-201ENST00000608682 624 ntBASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 AC068870.2-201ENST00000620635 389 ntBASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 AL359757.1-201ENST00000623176 255 ntBASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 AF001550.2-201ENST00000636643 217 ntBASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 AP001284.1-201ENST00000528393 2118 ntBASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 DBF4P1-201ENST00000412976 1892 ntBASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 AL390862.1-201ENST00000635467 1469 ntBASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.45□□□□□ -1.54
PCDHB1Q9Y5F3 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 AC022031.1-201ENST00000585985 2593 ntBASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 RPL23P2-201ENST00000320371 421 ntBASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 U8.4-201ENST00000363626 134 ntBASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 MIR550A3-201ENST00000390735 95 ntBASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 AL133270.1-201ENST00000402635 279 ntBASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 RPL37P18-201ENST00000411602 243 ntBASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 AC048351.1-201ENST00000420064 602 ntBASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 RPL12P17-201ENST00000432393 498 ntBASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 AC022431.1-201ENST00000450941 438 ntBASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 TPTE2P5-203ENST00000458118 728 ntBASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 AC092754.2-201ENST00000463506 460 ntBASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 SYPL1P1-201ENST00000473622 768 ntBASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 RPL21P6-201ENST00000479171 504 ntBASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 RPS21P4-201ENST00000487122 248 ntBASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 AC091435.1-201ENST00000505442 584 ntBASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms