Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AC104623.2-202ENST00000623477 4002 ntBASIC5.52□□□□□ -1.53
SSX2IPQ9Y2D8 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SSX2IPQ9Y2D8 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
SSX2IPQ9Y2D8 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SSX2IPQ9Y2D8 AC017007.4-201ENST00000503353 1352 ntBASIC5.52□□□□□ -1.53
SSX2IPQ9Y2D8 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SSX2IPQ9Y2D8 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
SSX2IPQ9Y2D8 AL034549.2-201ENST00000618285 3373 ntBASIC5.52□□□□□ -1.53
SSX2IPQ9Y2D8 AC093775.1-201ENST00000624154 1868 ntBASIC5.51□□□□□ -1.53
SSX2IPQ9Y2D8 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SSX2IPQ9Y2D8 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
SSX2IPQ9Y2D8 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SSX2IPQ9Y2D8 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.51□□□□□ -1.53
SSX2IPQ9Y2D8 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.51□□□□□ -1.53
SSX2IPQ9Y2D8 AC100757.1-201ENST00000616872 1835 ntBASIC5.51□□□□□ -1.53
SSX2IPQ9Y2D8 RBPJP2-201ENST00000618187 1444 ntBASIC5.51□□□□□ -1.53
SSX2IPQ9Y2D8 SMG1P4-204ENST00000523028 4131 ntBASIC5.51□□□□□ -1.53
SSX2IPQ9Y2D8 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SSX2IPQ9Y2D8 RNU4-51P-201ENST00000364206 140 ntBASIC5.51□□□□□ -1.53
SSX2IPQ9Y2D8 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC5.51□□□□□ -1.53
SSX2IPQ9Y2D8 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
SSX2IPQ9Y2D8 FCF1P5-201ENST00000406490 482 ntBASIC5.51□□□□□ -1.53
SSX2IPQ9Y2D8 AC010385.1-201ENST00000412374 256 ntBASIC5.51□□□□□ -1.53
SSX2IPQ9Y2D8 AC245028.1-201ENST00000423259 256 ntBASIC5.51□□□□□ -1.53
SSX2IPQ9Y2D8 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.51□□□□□ -1.53
SSX2IPQ9Y2D8 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC5.51□□□□□ -1.53
SSX2IPQ9Y2D8 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.51□□□□□ -1.53
SSX2IPQ9Y2D8 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC5.51□□□□□ -1.53
SSX2IPQ9Y2D8 NPM1P33-201ENST00000438918 872 ntBASIC5.51□□□□□ -1.53
SSX2IPQ9Y2D8 AC097499.1-201ENST00000444277 208 ntBASIC5.51□□□□□ -1.53
SSX2IPQ9Y2D8 HMGB3P6-201ENST00000444896 598 ntBASIC5.51□□□□□ -1.53
SSX2IPQ9Y2D8 RPL7L1P1-201ENST00000448259 785 ntBASIC5.51□□□□□ -1.53
SSX2IPQ9Y2D8 OR52E3P-201ENST00000452083 936 ntBASIC5.51□□□□□ -1.53
SSX2IPQ9Y2D8 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SSX2IPQ9Y2D8 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.51□□□□□ -1.53
SSX2IPQ9Y2D8 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.51□□□□□ -1.53
SSX2IPQ9Y2D8 SNORA3.4-201ENST00000515969 96 ntBASIC5.51□□□□□ -1.53
SSX2IPQ9Y2D8 Y_RNA.688-201ENST00000516565 95 ntBASIC5.51□□□□□ -1.53
SSX2IPQ9Y2D8 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.51□□□□□ -1.53
SSX2IPQ9Y2D8 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
SSX2IPQ9Y2D8 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.51□□□□□ -1.53
SSX2IPQ9Y2D8 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC5.51□□□□□ -1.53
SSX2IPQ9Y2D8 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.51□□□□□ -1.53
SSX2IPQ9Y2D8 NMNAT1P1-201ENST00000554095 876 ntBASIC5.51□□□□□ -1.53
SSX2IPQ9Y2D8 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.51□□□□□ -1.53
SSX2IPQ9Y2D8 AC009094.1-201ENST00000564443 426 ntBASIC5.51□□□□□ -1.53
SSX2IPQ9Y2D8 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.51□□□□□ -1.53
SSX2IPQ9Y2D8 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.51□□□□□ -1.53
SSX2IPQ9Y2D8 AC087783.2-201ENST00000605070 562 ntBASIC5.51□□□□□ -1.53
SSX2IPQ9Y2D8 OR2BH1P-201ENST00000608850 864 ntBASIC5.51□□□□□ -1.53
SSX2IPQ9Y2D8 AL138478.1-201ENST00000612252 832 ntBASIC5.51□□□□□ -1.53
SSX2IPQ9Y2D8 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.51□□□□□ -1.53
SSX2IPQ9Y2D8 AL121895.2-201ENST00000619558 447 ntBASIC5.51□□□□□ -1.53
SSX2IPQ9Y2D8 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.51□□□□□ -1.53
SSX2IPQ9Y2D8 AC024023.1-201ENST00000624530 922 ntBASIC5.51□□□□□ -1.53
SSX2IPQ9Y2D8 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.51□□□□□ -1.53
SSX2IPQ9Y2D8 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SSX2IPQ9Y2D8 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
SSX2IPQ9Y2D8 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
SSX2IPQ9Y2D8 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SSX2IPQ9Y2D8 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
SSX2IPQ9Y2D8 SDAD1P1-202ENST00000524156 2051 ntBASIC5.51□□□□□ -1.53
SSX2IPQ9Y2D8 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SSX2IPQ9Y2D8 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SSX2IPQ9Y2D8 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.5□□□□□ -1.53
SSX2IPQ9Y2D8 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
SSX2IPQ9Y2D8 AC015813.6-201ENST00000624409 5808 ntBASIC5.5□□□□□ -1.53
SSX2IPQ9Y2D8 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
SSX2IPQ9Y2D8 RN7SKP95-201ENST00000362860 303 ntBASIC5.5□□□□□ -1.53
SSX2IPQ9Y2D8 RNU4-92P-201ENST00000363783 136 ntBASIC5.5□□□□□ -1.53
SSX2IPQ9Y2D8 RN7SKP113-201ENST00000363891 295 ntBASIC5.5□□□□□ -1.53
SSX2IPQ9Y2D8 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC5.5□□□□□ -1.53
SSX2IPQ9Y2D8 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SSX2IPQ9Y2D8 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC5.5□□□□□ -1.53
SSX2IPQ9Y2D8 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
SSX2IPQ9Y2D8 RNU1-74P-201ENST00000384108 171 ntBASIC5.5□□□□□ -1.53
SSX2IPQ9Y2D8 MIR142-201ENST00000384835 87 ntBASIC5.5□□□□□ -1.53
SSX2IPQ9Y2D8 RN7SKP114-201ENST00000410327 279 ntBASIC5.5□□□□□ -1.53
SSX2IPQ9Y2D8 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SSX2IPQ9Y2D8 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SSX2IPQ9Y2D8 CHEK2P3-201ENST00000416118 248 ntBASIC5.5□□□□□ -1.53
SSX2IPQ9Y2D8 FO393419.3-201ENST00000428741 282 ntBASIC5.5□□□□□ -1.53
SSX2IPQ9Y2D8 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC5.5□□□□□ -1.53
SSX2IPQ9Y2D8 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.5□□□□□ -1.53
SSX2IPQ9Y2D8 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC5.5□□□□□ -1.53
SSX2IPQ9Y2D8 EEF1A1P39-201ENST00000440791 250 ntBASIC5.5□□□□□ -1.53
SSX2IPQ9Y2D8 CEACAMP9-201ENST00000442990 513 ntBASIC5.5□□□□□ -1.53
SSX2IPQ9Y2D8 KATNBL1P3-201ENST00000443475 909 ntBASIC5.5□□□□□ -1.53
SSX2IPQ9Y2D8 AL592437.1-201ENST00000443781 492 ntBASIC5.5□□□□□ -1.53
SSX2IPQ9Y2D8 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC5.5□□□□□ -1.53
SSX2IPQ9Y2D8 RN7SL189P-201ENST00000468631 289 ntBASIC5.5□□□□□ -1.53
SSX2IPQ9Y2D8 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC5.5□□□□□ -1.53
SSX2IPQ9Y2D8 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SSX2IPQ9Y2D8 AC010486.3-201ENST00000511602 785 ntBASIC5.5□□□□□ -1.53
SSX2IPQ9Y2D8 RNU6-1308P-201ENST00000516817 103 ntBASIC5.5□□□□□ -1.53
SSX2IPQ9Y2D8 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SSX2IPQ9Y2D8 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SSX2IPQ9Y2D8 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.5□□□□□ -1.53
SSX2IPQ9Y2D8 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.5□□□□□ -1.53
SSX2IPQ9Y2D8 AC040958.1-201ENST00000561102 201 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms