Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 FTH1P10-202ENST00000430907 550 ntBASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 PHBP4-201ENST00000437447 837 ntBASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 AC114755.4-201ENST00000439114 443 ntBASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 RPSAP49-201ENST00000445182 886 ntBASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 AL162388.1-201ENST00000450912 352 ntBASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 AC007849.1-201ENST00000469794 513 ntTSL 4 BASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 GRHL1-206ENST00000480736 572 ntTSL 4 BASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 AC090686.1-201ENST00000481577 749 ntBASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 AC233724.10-201ENST00000510454 409 ntBASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 AC026700.1-201ENST00000512074 544 ntBASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 SNORA25.14-201ENST00000516481 132 ntBASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 RNU6-307P-201ENST00000516743 106 ntBASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 AC073571.1-201ENST00000549103 475 ntTSL 3 BASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 NPM1P42-201ENST00000560329 862 ntBASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 IGHV1OR15-3-201ENST00000564926 351 ntBASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 AC015720.2-201ENST00000567709 334 ntBASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 SS18L2P2-201ENST00000583960 235 ntBASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 AP001485.1-201ENST00000604799 199 ntBASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 AC010424.2-201ENST00000607594 443 ntBASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 SNORD91A-202ENST00000609620 191 ntBASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 SNORA43.5-201ENST00000631270 138 ntBASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 AC233280.20-201ENST00000637412 416 ntBASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 KDM4C-205ENST00000428870 3039 ntTSL 2 BASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 PAH-201ENST00000307000 2466 ntTSL 5 BASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 AL021877.2-201ENST00000624442 10684 ntBASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 AL353753.1-201ENST00000612217 2320 ntTSL 2 BASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC7.43□□□□□ -1.22
VPS9D1Q9Y2B5 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
VPS9D1Q9Y2B5 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
VPS9D1Q9Y2B5 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
VPS9D1Q9Y2B5 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
VPS9D1Q9Y2B5 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
VPS9D1Q9Y2B5 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC7.43□□□□□ -1.22
VPS9D1Q9Y2B5 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
VPS9D1Q9Y2B5 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
VPS9D1Q9Y2B5 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
VPS9D1Q9Y2B5 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
VPS9D1Q9Y2B5 SNORD50.2-201ENST00000365465 70 ntBASIC7.43□□□□□ -1.22
VPS9D1Q9Y2B5 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC7.43□□□□□ -1.22
VPS9D1Q9Y2B5 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
VPS9D1Q9Y2B5 GAGE12E-201ENST00000381698 520 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
VPS9D1Q9Y2B5 MIR558-201ENST00000384920 94 ntBASIC7.43□□□□□ -1.22
VPS9D1Q9Y2B5 RNU6-493P-201ENST00000391321 108 ntBASIC7.43□□□□□ -1.22
VPS9D1Q9Y2B5 AP000580.1-201ENST00000404439 358 ntBASIC7.43□□□□□ -1.22
VPS9D1Q9Y2B5 RNU6-272P-201ENST00000411028 104 ntBASIC7.43□□□□□ -1.22
VPS9D1Q9Y2B5 AL596448.1-201ENST00000415024 392 ntBASIC7.43□□□□□ -1.22
VPS9D1Q9Y2B5 AC127537.1-201ENST00000418183 748 ntBASIC7.43□□□□□ -1.22
VPS9D1Q9Y2B5 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC7.43□□□□□ -1.22
VPS9D1Q9Y2B5 RPS15AP30-201ENST00000420976 390 ntBASIC7.43□□□□□ -1.22
VPS9D1Q9Y2B5 BX284632.2-201ENST00000421091 399 ntBASIC7.43□□□□□ -1.22
VPS9D1Q9Y2B5 MRPS18CP6-201ENST00000423587 223 ntBASIC7.43□□□□□ -1.22
VPS9D1Q9Y2B5 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC7.43□□□□□ -1.22
VPS9D1Q9Y2B5 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC7.43□□□□□ -1.22
VPS9D1Q9Y2B5 C4BPAP2-201ENST00000428434 478 ntBASIC7.43□□□□□ -1.22
VPS9D1Q9Y2B5 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
VPS9D1Q9Y2B5 AL031663.1-201ENST00000437445 219 ntBASIC7.43□□□□□ -1.22
VPS9D1Q9Y2B5 TUBB4BP6-201ENST00000437576 479 ntBASIC7.43□□□□□ -1.22
VPS9D1Q9Y2B5 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC7.43□□□□□ -1.22
VPS9D1Q9Y2B5 AL359955.2-201ENST00000445380 353 ntBASIC7.43□□□□□ -1.22
VPS9D1Q9Y2B5 NDUFB1P2-201ENST00000449477 176 ntBASIC7.43□□□□□ -1.22
VPS9D1Q9Y2B5 AL591379.2-201ENST00000450223 397 ntBASIC7.43□□□□□ -1.22
VPS9D1Q9Y2B5 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC7.43□□□□□ -1.22
VPS9D1Q9Y2B5 CLDND1-205ENST00000502288 560 ntTSL 4 BASIC7.43□□□□□ -1.22
VPS9D1Q9Y2B5 AC021491.1-201ENST00000502300 349 ntTSL 5 BASIC7.43□□□□□ -1.22
VPS9D1Q9Y2B5 AC139272.1-201ENST00000505516 640 ntBASIC7.43□□□□□ -1.22
VPS9D1Q9Y2B5 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC7.43□□□□□ -1.22
VPS9D1Q9Y2B5 AC114801.1-201ENST00000512633 297 ntBASIC7.43□□□□□ -1.22
VPS9D1Q9Y2B5 DEFB109D-201ENST00000529497 240 ntBASIC7.43□□□□□ -1.22
VPS9D1Q9Y2B5 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
VPS9D1Q9Y2B5 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC7.43□□□□□ -1.22
VPS9D1Q9Y2B5 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC7.43□□□□□ -1.22
VPS9D1Q9Y2B5 AC118757.1-202ENST00000589074 609 ntTSL 2 BASIC7.43□□□□□ -1.22
VPS9D1Q9Y2B5 AC005884.2-201ENST00000593107 247 ntTSL 5 BASIC7.43□□□□□ -1.22
VPS9D1Q9Y2B5 CUX2P1-201ENST00000606426 298 ntBASIC7.43□□□□□ -1.22
VPS9D1Q9Y2B5 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC7.43□□□□□ -1.22
VPS9D1Q9Y2B5 AC244153.1-204ENST00000615582 401 ntTSL 2 BASIC7.43□□□□□ -1.22
VPS9D1Q9Y2B5 AC106875.2-201ENST00000617634 596 ntTSL 2 BASIC7.43□□□□□ -1.22
VPS9D1Q9Y2B5 METAP1-212ENST00000625963 147 ntTSL 5 BASIC7.43□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms